| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,552,191 | C→A | 11.8% | intergenic (+200/+207) | fdnI → / ← yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,552,191 | 0 | C | A | 11.8% | 215.4 / 4.2 | 96 | intergenic (+200/+207) | fdnI/yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (27/54); new base A (7/6); total (36/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCA > NC_000913/1552042‑1552339 | atatTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc > 1:141172/1‑150 (MQ=31)atatTGTAGACAACGTAGGCTTTGTGCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATCAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc < 2:35163/150‑1 (MQ=14) tGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAAt < 1:1461646/150‑1 (MQ=34) gTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATg < 2:92762/150‑1 (MQ=34) tAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATgg < 1:1736741/150‑1 (MQ=34) gACCACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgcg < 2:880044/150‑1 (MQ=21) gACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgcg < 1:1144018/150‑1 (MQ=34) aCAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgcgc < 1:1619610/150‑1 (MQ=34) aaCGTAGGCTTTGTTCATGCCGGATGCGGCGTGATCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCtc < 1:611795/150‑2 (MQ=21) aCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGt < 1:31955/150‑1 (MQ=35) gTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGAGTTTGTCATCAGTTAAAAATGGCTCTGTaa > 2:330564/1‑150 (MQ=11) aGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCTGCATGAAAACCCTTCAAATCCAATAGATTGCAGTTAACGTGTAGGCCTGATAATAGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTATaaaa > 2:648928/1‑150 (MQ=11) ggCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTTAACGTGTAGGACTTATAAGCGTAGCGAATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAg < 1:91378/150‑1 (MQ=255) ggCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCCGCAGGCAATGTTGCGTTTGTCATCAGTTTGAAATGGCGCTGTAAAAg > 1:1388870/1‑150 (MQ=255) ggCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAg < 2:1079044/150‑1 (MQ=40) ggCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAg < 1:935796/150‑1 (MQ=40) ggCTTTGTTCATGCCGGATGAGGCGTGAACGCCTTATCCGGCATGAAAACACTTCAAATCCAATAGATTGCAGTTAACGTGTAGTCCTGATAAGCGTAGCGCATCAGGAAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAg < 2:292202/150‑1 (MQ=14) gatttGTTCATGCCGGATGCGTCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAgg < 1:1391432/148‑1 (MQ=255) gCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAgg < 1:852715/150‑1 (MQ=40) tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTc < 2:425927/150‑1 (MQ=255) gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAACCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTTAAATGGCGCTGTAGAAggaggca > 1:1322306/1‑145 (MQ=255) gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCa < 1:675331/150‑1 (MQ=255) gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCa < 1:666556/150‑1 (MQ=255) aTGCCGGATGCGGCTTGAACGCAGAATCCGTCATGAAAACCCTTCAAAACCTATATATAGCATTGAACGTGTAGCCCAGATAAGCGTAGCTCAGCAGGCAATGTTGCGTTTGTCATCAGCTTCAAATGGCGCTGTAAAAGGCGTCAtttt < 1:323293/150‑1 (MQ=14) aTGCAGTATTCGGCGTGAACGCCTTATCCGTCATGAAAACCCTTCAAAACCAATAGATTGCAGTTAACGTGTAGGCCTGATAAGCTTAGCGCTTCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtttt < 2:951029/150‑1 (MQ=14) tGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTc < 2:727025/150‑1 (MQ=255) tGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTc < 2:141172/150‑1 (MQ=255) tGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTc < 1:693870/150‑1 (MQ=255) gCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCa < 1:1381630/150‑1 (MQ=255) cctgATGCGGCGTTAACGCCTAATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGTACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTTCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCat < 1:1072921/147‑1 (MQ=17) ccGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCat < 2:576882/150‑1 (MQ=255) cGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCata < 2:1583689/150‑1 (MQ=255) cGGATGCCGCGTGAACTCCTTATCCTGCATGAAAATCCATCAACTCCAATAGATATCAGTGAACGTGTAGTCTTGATAAGATTAGCGCATCAGGCAATTTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAATAGTCGTCATTTTCata < 2:1775695/150‑1 (MQ=25) aTGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTg < 1:1725819/150‑1 (MQ=255) tGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGt > 1:453122/1‑150 (MQ=255) cggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAATCGTAGCGCATCAGGCAATGTTGCGTTTGTAATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAg < 2:1180952/150‑1 (MQ=255) gcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGAc < 1:1844233/150‑1 (MQ=255) gcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGAc < 1:470929/150‑1 (MQ=255) aaCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGt > 2:1559439/1‑150 (MQ=255) cGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTTTAGGCCTGATAATCGAAGCGCATCAGGCAAAGTTGCGTTTGTCAACCGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAg < 2:1410611/150‑1 (MQ=18) ttATCCGTAATGAAAACCCTTAAAATCCAATATATTGCAGTGAACGTGTAGGCCTGATAATCGTAGCGCTTCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCtt < 2:160776/150‑1 (MQ=18) tccgtgaTGAAAACCCTTCAAATCCAATAGCTTGCACTGAACTTGTAGGCCTGAGATGCGTATCTATTCAGTCAATGTTTATTTTCTTATTAGTTGAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGt < 2:282412/144‑1 (MQ=16) ccGGCATGAAAACCCTTCAAATCCAATAGTTTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGtt < 2:1756929/150‑1 (MQ=255) ggCATGAAAACCCTTCATATCCAATAGATTGCAGTGAACGTGTAGTCCTGATAAGCGTATCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCa < 2:420100/150‑1 (MQ=255) cATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATg > 2:638099/1‑150 (MQ=255) aTGAAAACCCTTGAAATCCTATAGATTGATGTGTACGTTTAGTAATTATATTCGGAGCGCCTCATTTAATGTTGCTTTTGTTATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGc < 2:164184/150‑1 (MQ=12) aataCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCTTAGCGATTCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgg < 2:937286/147‑1 (MQ=21) aaaaCGCTTCATTTCCAATAGATTGCCGTGAACGTGTAGGCCTGATATGGGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgg < 2:1312320/150‑1 (MQ=21) aaaaCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTATACAACGTAGGCTTTCTTCATGCCgg > 2:1615951/1‑150 (MQ=255) aaCCCTTCAAATCCAATATATTGCAGTGTACGTGCAGTCAAGATAAGCGGATCTCATCATGAAATGTTTCTTTTTTTATAAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGAt < 2:1299171/150‑1 (MQ=18) aaCCCTTCAAATCCAATAGATTGAAGTGAACGTGTAGGCCTGATAATCGTAGCGCATCAGGAAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGAt < 1:1818486/150‑1 (MQ=255) cccTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgc > 1:1560977/1‑150 (MQ=255) ccTTCAAATCCAATAGATTGCAGTGAACGTGTAGTCCTGATAAGCGTATCTCATCAGGCAATGTTTCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcg < 1:1070095/150‑1 (MQ=255) gaaTCCAATAGATTGCACTGAACGTGTAGGCCTGATAAGCGTATCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTg < 2:1520663/149‑1 (MQ=255) aaTAGATTGCAGTGAACGTGTAGGCCTTATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGcc < 2:431285/150‑1 (MQ=255) aaTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCTTCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGcc < 2:1727236/150‑1 (MQ=255) aaTAGATTGAAGTGAACGTGTAGGCCTGATAAGGGTAGCGAATGAGTCAATGTTGCTTTTTTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAAGCCGGATGCGGCGTGAACGcc < 2:1927585/150‑1 (MQ=21) tGCAGTGAACGTGTAGGCCTGATAAGCGTATCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCg < 2:1643709/150‑1 (MQ=255) ccgcgaccGTGTAGGCCTGATACGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGc < 1:1389955/143‑1 (MQ=21) gTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCAt < 1:533923/150‑1 (MQ=255) tGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGACTTATCCGGCATg > 1:1370929/1‑150 (MQ=255) tGAAAGTTTAGTCCTGATAAGCGTAGCGCATCAGGCAATGTTGCTTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATg < 2:1452713/150‑1 (MQ=255) gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAc > 1:894471/1‑150 (MQ=255) gtgtAGGCCTCATACGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAc < 1:706360/150‑1 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCa > 1:1736751/1‑150 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCaa < 1:782147/150‑1 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCaa < 1:1503361/150‑1 (MQ=255) cTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGGCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCaaa < 2:1573055/150‑1 (MQ=255) aTAAGCGTAGCGCATCAGGCAATGTTGCGTTTTTCATAATTTTCAAATGGCTCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATcc < 1:552870/150‑1 (MQ=255) aTAAGCGTAGCGCATCAGGAAATGTTGCTTTTTTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATcc < 2:562041/150‑1 (MQ=255) aGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAAt < 2:453122/150‑1 (MQ=255) aGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAATGAGTCATTTTAATATTGTATAAAACGTAGGCTTTGTACATGCCCGAACCGTCGTGATAGACATAAGCCGAAACAAAACCCTTcaaatcaaat > 2:241190/1‑150 (MQ=12) gCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTAAAAACCAATa > 2:1932223/1‑150 (MQ=255) gTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGGGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGa > 1:1892675/1‑150 (MQ=255) gTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACCACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGACTTATACGGCATGAAAAACCTTCAAATCAAATAGa > 1:1742849/1‑150 (MQ=18) gTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGa > 1:458591/1‑150 (MQ=255) gTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAGCCGTCAAATCCAATAGa > 1:1711124/1‑150 (MQ=255) aGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATCCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAtt > 1:1765863/1‑150 (MQ=255) tcATGAGGAAATGTTGTTTTTTTCTTCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCa < 2:1933494/149‑1 (MQ=14) aGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGaa > 1:1314885/1‑150 (MQ=255) ggCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATTCAGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATAGCAGTGaaa > 1:1663218/1‑149 (MQ=255) gCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACCTAGGCTTTGTTCATGCCGGATGAGTCGTGAAAGCCTTATACGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACg > 1:1160298/1‑150 (MQ=17) cAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt > 2:1975471/1‑150 (MQ=255) aaTGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtg > 2:1807591/1‑150 (MQ=255) gTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGACTTATCCGGCATGAAAAACCTTCAAATCCAATAGATTGCAGTGAACGTGTAg > 1:1246394/1‑150 (MQ=255) tGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGc > 2:837438/1‑150 (MQ=255) tcGTTTTTAATAAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGcc < 2:1605163/149‑1 (MQ=255) tgaaatcaGATTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATa < 2:627909/146‑1 (MQ=255) tGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATa > 2:76609/1‑150 (MQ=255) gTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCTTGAACGCCATATCCGGCAGGAAAACCCTTAAAATCCAAAAGATATCAGTGAAAGTGTAGGCCTGATaa > 1:304548/1‑150 (MQ=14) atcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCg > 1:612399/1‑150 (MQ=39) atcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCg > 1:1854249/1‑150 (MQ=39) atcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCg > 2:667103/1‑150 (MQ=39) atcaGTTTCAAATGGCGCTGTAAAAGGCGTCAGTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGAGGCGGCGTGAACGCCTGATCCGGCATGAAAACCCTTCAAATCCAATAGCTTGCAGTGAACGTGTAGGCCTGATAAgag > 1:1783806/1‑148 (MQ=255) tcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTAATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGt > 2:238888/1‑150 (MQ=38) gTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATACGCGTAgc > 2:1491720/1‑150 (MQ=25) gTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGACTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgc > 1:1047706/1‑150 (MQ=25) tCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAGCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCa > 1:1647853/1‑150 (MQ=18) | ATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCA > NC_000913/1552042‑1552339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |