| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,996,068 | T→A | 7.0% | intergenic (+26/+42) | yecF → / ← sdiA | DUF2594 family protein/quorum‑sensing transcriptional activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,996,068 | 0 | T | A | 7.0% | 328.6 / 6.0 | 111 | intergenic (+26/+42) | yecF/sdiA | DUF2594 family protein/quorum‑sensing transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base T (39/62); new base A (5/4); total (45/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 115 total aligned reads displayed.
CAAGCTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAAATTGACCGTATTCTCAGAGA > NC_000913/1995920‑1996216 | cAAGCTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAAGCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCTTCAGTAATATAAAACCGGCTGATAGCGTGCCttt < 2:1482701/150‑1 (MQ=255)cAAGCTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCttt > 2:305937/1‑150 (MQ=255)cAAGCTGACGCGGGCCGCGGGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAACACCGGCTGATAGCGTGCCttt < 2:1325725/150‑1 (MQ=255) aGCTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGCCGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCa > 1:1416179/1‑150 (MQ=255) gCTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAg < 1:1963773/150‑1 (MQ=255) cTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGc < 1:1992651/150‑1 (MQ=255) cTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGc < 2:330125/150‑1 (MQ=255) gACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCg < 2:662526/150‑1 (MQ=255) cgcgGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGAGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCAACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTGTCAGCCggg > 1:1654267/1‑149 (MQ=255) cgGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGttt < 1:1048744/150‑1 (MQ=255) gggCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGtttt < 1:625671/150‑1 (MQ=255) gggCCGAGTGATGTTAAAGATTGATAAAGAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCTGTATTTTCCAAAACGGTGAAGCAAATTAACCAAGCCTACCGTCTGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGtttt < 1:1211153/150‑1 (MQ=255) ggCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCGGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGAAAGGCACGCTATCAGCCGGtttta < 2:1671391/150‑2 (MQ=38) gCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTg < 1:1405690/150‑1 (MQ=255) ccGCGGGTTGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCCGGCTGCAGTATTTTCCAAAACGGTTAACCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGc < 1:724247/150‑1 (MQ=255) gcgTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCAt < 1:654562/150‑1 (MQ=255) gcgTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGAAAGGCACGCTATCAGCCGGttttatatt < 1:1762572/150‑6 (MQ=38) gTGATGTTAAAGAGGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGAAAGGCACGCTATCAGCCGGttttatattac < 2:1589134/150‑8 (MQ=37) tGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTg < 1:1872643/150‑1 (MQ=255) gATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTgg > 2:1410266/1‑150 (MQ=255) tGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCa > 1:2008311/1‑150 (MQ=255) ttAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACg > 1:482440/1‑150 (MQ=255) tAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAACCGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCCGACGGTTGTTGCATCTGGCACGc > 2:1224506/1‑150 (MQ=255) tAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGc > 1:6466/1‑150 (MQ=255) aaGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAg < 1:313053/150‑1 (MQ=255) aaGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCGGCAGTATTTTCCAAATCGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTATCTGCCGGTGTTTGCATCTgggccgaag > 2:104720/1‑143 (MQ=255) aGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAgg < 1:301734/150‑1 (MQ=255) tGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACa < 1:1942965/150‑1 (MQ=255) ggAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTGTTGCATCTGGCACGCAGGACAg > 1:368856/1‑150 (MQ=255) gAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTAGCATCTGGCACGCAGGACAGa > 2:1668626/1‑150 (MQ=255) gAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCATGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGa > 1:1133206/1‑150 (MQ=255) aaCAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGTCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAag > 1:1828116/1‑150 (MQ=255) aaCAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAag < 1:1656130/150‑1 (MQ=255) aaCAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAag < 2:1504685/150‑1 (MQ=255) aaCAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAag < 2:1636814/150‑1 (MQ=255) aaCAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAag < 2:1879310/150‑1 (MQ=255) cAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAACCAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAagag > 1:1782820/1‑150 (MQ=255) cTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATc < 1:817796/150‑1 (MQ=255) tGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCaa > 2:1100846/1‑150 (MQ=255) ggcgcTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCaa < 2:1320871/149‑1 (MQ=255) cgcTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAAt < 2:324197/150‑1 (MQ=255) cgcTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAAt < 1:1475981/150‑1 (MQ=255) tCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGcc < 1:1544648/150‑1 (MQ=255) cGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCa > 1:67147/1‑150 (MQ=255) gAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAg > 2:1779660/1‑150 (MQ=255) aaGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGt < 2:427371/150‑1 (MQ=255) aaGACGAAACACAGGCTGCAGTATTTTACAAAACGGTTAAGCATATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGAGTGCATATCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAACCCAGt < 1:109593/150‑1 (MQ=255) gACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAg > 1:1696867/1‑150 (MQ=255) cGAACCCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTATCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCg > 1:134337/1‑150 (MQ=255) cGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCg < 2:414440/150‑1 (MQ=255) aaCCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTAAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGcc > 2:1517663/1‑150 (MQ=255) ccAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCcgcg < 1:775127/150‑1 (MQ=255) tGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAg > 2:1604240/1‑150 (MQ=255) aTTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAAcc > 1:1772175/1‑150 (MQ=255) tttCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTg < 2:1632500/150‑1 (MQ=255) tCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTggg < 1:1100846/150‑1 (MQ=255) tCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTggg < 2:1229153/150‑1 (MQ=255) ccAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGCTCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGt < 1:1143825/150‑1 (MQ=255) cAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTc < 1:965030/150‑1 (MQ=255) aaCGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTCATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTa < 1:166319/150‑1 (MQ=255) cGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTAtt > 1:689309/1‑150 (MQ=255) ttAAGCAAATTAAACAAGCCTACAGTCAGTAATATAAAACCGGCTGATAGCTTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTTAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTgg < 1:1991135/150‑1 (MQ=255) tAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGt < 1:1684561/150‑1 (MQ=255) aaGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTg > 1:1861684/1‑150 (MQ=255) aaGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTg < 2:674498/150‑1 (MQ=255) aGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCATTCAGCCGGTTTTTGCATCTGGCACGCAGCACAGAAAAGAGATCAAATAAAGCCATTACCGGCCGCCTAACACGCAACCTGGTTCTTATTAGGtta > 1:334673/1‑148 (MQ=255) cAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCAt > 1:378791/1‑150 (MQ=255) cAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCAt > 1:1353159/1‑150 (MQ=255) aaaTTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTCAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCAtt < 1:159640/150‑1 (MQ=255) aaaTTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCAtt > 1:1065077/1‑150 (MQ=255) aaTTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTa > 2:1819767/1‑150 (MQ=255) cAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAAtttttt < 1:779296/150‑1 (MQ=255) aGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTc < 1:1277036/150‑1 (MQ=255) aGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACACGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTc < 1:1135614/150‑1 (MQ=255) aGCCTACAGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTc < 1:1300750/150‑1 (MQ=255) ccGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCACCCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATg > 1:1952592/1‑150 (MQ=255) ccGTCAGTAATATAAAACCGGCTGATAGCGGGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACCGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATg < 2:1696128/150‑1 (MQ=255) gTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGtt < 2:1416179/150‑1 (MQ=255) gTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGtt < 1:647350/150‑1 (MQ=255) cAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGtttt < 2:433015/150‑1 (MQ=255) aGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCAGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTATCGTCCGCGTAACAGGCAACCTGGTTCGTATTTGGTGCATTAATTTTTTTCTGCATGttttt > 2:200700/1‑150 (MQ=255) tAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCt < 1:1692864/150‑1 (MQ=255) aaTATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGGAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGGATGTTTTTCtg > 1:1723084/1‑150 (MQ=255) atatAACACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCtgg < 1:1862975/150‑1 (MQ=255) tataAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCtggt > 1:837281/1‑150 (MQ=255) caaaaaCCGGCTGAAAGGCACGCTATCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCtggtg > 2:1815712/3‑150 (MQ=38) caaaaaCCGGCTGAAAGGCACGCTATCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCtggtg > 1:1288532/3‑150 (MQ=38) ataAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCtggtg > 2:1940806/1‑150 (MQ=255) ataAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCtggtg < 1:1410266/150‑1 (MQ=255) taAAACCGGCTGTTATCGTGCCTTTCAGCCGGTTTTTGCATCTGGCAAGCAGGACAGAATAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCtggtgg < 1:1224506/150‑1 (MQ=255) taAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTCGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCtggtgg > 2:1776946/1‑150 (MQ=255) cTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTTGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGAGCATTAAATTTTTTCTGCATGTTTTTCTGGTGGATATTGAcc > 1:55011/1‑150 (MQ=255) tGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAAATTGACCg > 2:913119/1‑150 (MQ=255) gCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAAATTGACCGTATtc < 2:1145376/150‑1 (MQ=255) gCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATAAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGGCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAAATTGACCGTATtc < 2:106434/150‑1 (MQ=255) cGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAAATTGACCGTATtct < 2:1195977/150‑1 (MQ=255) gTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGACATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGAGGAAATTGACCGTATtctc < 2:289215/150‑1 (MQ=255) gCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAATTTGACCGTATTCTCag > 2:1719577/1‑150 (MQ=255) gCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAAATTGACCGTATTCTCag < 2:1993146/150‑1 (MQ=255) tttCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGGCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAAATTGACCGTATTCTCAgaga > 2:1001420/1‑150 (MQ=255) | CAAGCTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAATATAAAACCGGCTGATAGCGTGCCTTTCAGCCGGTTTTTGCATCTGGCACGCAGGACAGAAAAGAGATCAAATTAAGCCAGTAGCGGCCGCGTAACAGGCAACCTGGGTCTTATTTGGTGCATTAATTTTTTTCTGCATGTTTTTCTGGTGGAAATTGACCGTATTCTCAGAGA > NC_000913/1995920‑1996216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |