Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,390,401 C→A 5.5% intergenic (‑41/+56) psd ← / ← rsgA phosphatidylserine decarboxylase/ribosome small subunit‑dependent GTPase A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,390,4010CA 5.5% 393.6 / 9.4 140intergenic (‑41/+56)psd/rsgAphosphatidylserine decarboxylase/ribosome small subunit‑dependent GTPase A
Reads supporting (aligned to +/- strand):  ref base C (69/63);  new base A (4/4);  total (73/67)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.44e-01

Only 100 of 148 total aligned reads displayed.

CCAGTTTTGTCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGTTTCCGCGAT  >  NC_000913/4390252‑4390549
                                                                                                                                                     |                                                                                                                                                     
ccAGTTTTGTCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGcc                                                                                                                                                       >  2:1259231/1‑150 (MQ=255)
ccAGTTTTGTCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGcc                                                                                                                                                       <  2:1817034/150‑1 (MQ=255)
ccAGTTTTGTCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGcc                                                                                                                                                       <  1:677864/150‑1 (MQ=255)
ccAGTTTTGTCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGcc                                                                                                                                                       <  1:520139/150‑1 (MQ=255)
ccAGTTTTGTCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAAAGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGGTTTGTCGTTCCTGATCCGGcc                                                                                                                                                       >  2:1416731/1‑150 (MQ=255)
        gTCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGcc                                                                                                                                               >  1:1613837/1‑150 (MQ=255)
         tCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCg                                                                                                                                              >  1:1200382/1‑150 (MQ=255)
          cAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCgg                                                                                                                                             >  1:322598/1‑150 (MQ=255)
            gCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGAt                                                                                                                                           <  2:65838/150‑1 (MQ=255)
             ccATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATc                                                                                                                                          <  1:1565533/150‑1 (MQ=255)
             ccATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATc                                                                                                                                          >  1:1383761/1‑150 (MQ=255)
              cATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATcc                                                                                                                                         <  2:1963158/150‑1 (MQ=255)
              cATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATcc                                                                                                                                         <  1:721749/150‑1 (MQ=255)
              cATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATcc                                                                                                                                         >  1:208431/1‑150 (MQ=255)
              cATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATcc                                                                                                                                         <  2:1125771/150‑1 (MQ=255)
               aTCCTGCCCGCGTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCATGTAGGCCGGATcag                                                                                                                                        <  1:819931/150‑3 (MQ=255)
               aTCCGGCCCGCTTGCTTGCGCCCCACCCCGCCCGGCGAGTAAGCCCTAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCATGTAGGCCGGATcag                                                                                                                                        <  1:1800999/150‑3 (MQ=255)
                 ccTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑a                                                                                                                                     <  1:351672/150‑1 (MQ=255)
                    gCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCTCAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCCGCATGTAGGCCGGATcaggaacg                                                                                                                                   <  2:1007263/150‑8 (MQ=255)
                     cccGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑aaaaa                                                                                                                                 >  1:1087951/1‑150 (MQ=255)
                      ccGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGATTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTCTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑aaaaaa                                                                                                                                >  1:1298211/1‑150 (MQ=255)
                      ccGCTTGCTTGCGCCCCAACCCGACAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTATAGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTACTGATCCGGCCTAAATGCCGGATCCTG‑aaaaaa                                                                                                                                >  1:933174/1‑150 (MQ=255)
                       cGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCCGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑aaaaaaa                                                                                                                               >  1:1556319/1‑150 (MQ=255)
                       cGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑aaaaaaa                                                                                                                               >  1:1961515/1‑150 (MQ=255)
                        gcttgcttGCGCCCCAACCCGCCAGGCGAGTAAGTCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAg                                                                                                                              <  2:1417262/150‑1 (MQ=255)
                         cttgcttgCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACCTGCCGGATCCTG‑AAAAAAAgg                                                                                                                             >  2:648860/1‑150 (MQ=255)
                         cttgcttgCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAgg                                                                                                                             <  2:585167/150‑1 (MQ=255)
                          ttgcttgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAggg                                                                                                                            <  1:677256/150‑1 (MQ=255)
                          ttgcttgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAggg                                                                                                                            <  1:827867/150‑1 (MQ=255)
                          ttgcgtgcGCCCCAACCCGCCAGGCGAGTAACCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAggg                                                                                                                            <  2:1089370/150‑1 (MQ=255)
                          atgcttgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAggg                                                                                                                            <  1:307254/149‑1 (MQ=255)
                            gcttgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTATAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTTTCGTTCCTGATCAGGCCTACATGCCGGATCCTG‑AAAAAAAggggc                                                                                                                          >  2:1226336/1‑149 (MQ=255)
                             cttgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAATAAGGGGAc                                                                                                                         >  1:392360/1‑150 (MQ=255)
                             cttgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGAc                                                                                                                         <  1:11181/150‑1 (MQ=255)
                              ttgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACg                                                                                                                        >  1:1727408/1‑150 (MQ=255)
                              ttgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGCCCTACATGCCGGATCCTG‑AAAAAAAGGGGACg                                                                                                                        >  2:168886/1‑150 (MQ=255)
                               tgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGa                                                                                                                       >  1:1489236/1‑150 (MQ=255)
                               tgcGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGGTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGa                                                                                                                       <  1:327334/150‑1 (MQ=255)
                                    cccAACCAGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCAGTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGAGCCGG‑AAAAAAAGGGGACGATTCTa                                                                                                                  >  1:1918513/1‑150 (MQ=255)
                                      cAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAac                                                                                                                >  1:1765177/1‑150 (MQ=255)
                                      cAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAac                                                                                                                <  2:1488533/150‑1 (MQ=255)
                                         cccGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAacgac                                                                                                             >  1:1143937/1‑150 (MQ=255)
                                            gCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGt                                                                                                          <  2:527004/150‑1 (MQ=255)
                                              cAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTa                                                                                                        >  1:1432329/1‑150 (MQ=255)
                                                       aaGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGTGGACGATTCTAACGACGGTTAGCTTAATTg                                                                                               >  2:258151/1‑150 (MQ=255)
                                                       aaGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTg                                                                                               >  1:1543182/1‑150 (MQ=255)
                                                       aaGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTg                                                                                               <  2:1531002/150‑1 (MQ=255)
                                                       aaGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTg                                                                                               <  2:1659124/150‑1 (MQ=255)
                                                        aGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTgt                                                                                              >  2:1335151/1‑150 (MQ=255)
                                                          ccATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTgtca                                                                                            >  1:20953/1‑150 (MQ=255)
                                                           cATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTgtcag                                                                                           <  1:1233605/150‑1 (MQ=255)
                                                              aGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTgtcagtca                                                                                        >  1:1218369/1‑150 (MQ=255)
                                                               gTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTgtcagtgcc                                                                                       <  1:1373057/150‑4 (MQ=255)
                                                                  tCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCg                                                                                    <  1:2006215/150‑1 (MQ=255)
                                                                  tCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCg                                                                                    <  2:1568360/150‑1 (MQ=255)
                                                                  tCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCg                                                                                    >  2:465700/1‑150 (MQ=255)
                                                                     gCAGAATGTACTGTATCGAAAGTTTAAATGAATTTAACAAGTTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCGTCCGTAt                                                                                 <  1:448872/150‑1 (MQ=255)
                                                                       aGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCa                                                                               <  2:800715/150‑1 (MQ=255)
                                                                       aGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCa                                                                               <  1:1630636/150‑1 (MQ=255)
                                                                        gAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCTTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAg                                                                              >  2:896235/1‑150 (MQ=255)
                                                                          aTGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCT‑CAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGACACTCATCCTTATCAGaaa                                                                           >  2:140176/1‑150 (MQ=255)
                                                                             tACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTTATCCGGCCTAAATGCCGTATCCTG‑AAAAAAAGGGGACGATTCTAACTACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAg                                                                         <  1:945074/150‑1 (MQ=255)
                                                                             tACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAg                                                                         >  2:431777/1‑150 (MQ=255)
                                                                             tACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAg                                                                         <  1:1757302/150‑1 (MQ=255)
                                                                               cTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGtt                                                                       >  2:1771017/1‑150 (MQ=255)
                                                                                tGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGGCGTTCCTGATCCGGCCTACATGCCGGATCCTGAAAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGtt                                                                       <  2:1835852/150‑1 (MQ=255)
                                                                                     cGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTAcg                                                                 >  2:1136308/1‑150 (MQ=255)
                                                                                      gAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGACGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTAcgc                                                                <  1:1409022/150‑1 (MQ=255)
                                                                                         aGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGtt                                                             <  2:841072/150‑1 (MQ=255)
                                                                                           tttAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGtttt                                                           >  1:1304283/1‑150 (MQ=255)
                                                                                             tAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTa                                                         <  1:997914/150‑1 (MQ=255)
                                                                                               aaTGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGGTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTAcc                                                       >  2:1722539/1‑150 (MQ=255)
                                                                                                 tGAATTTAACAAGGTAGCCTCCAGGCCATTGATTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCAG‑AAAAAAAGAGGACGATTCAAACCACGGTTAGCTTAATAGTCAGTCATCCGTATCAGAAAAGTATATACGCGTATTTACCTg                                                     >  2:395348/1‑150 (MQ=255)
                                                                                                    aTTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTgcgc                                                  <  2:208431/150‑1 (MQ=255)
                                                                                                    aTTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGGTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTgcgc                                                  >  2:733814/1‑150 (MQ=255)
                                                                                                       tAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCAt                                               >  1:977250/1‑150 (MQ=255)
                                                                                                             ggTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTc                                         >  2:53425/1‑150 (MQ=255)
                                                                                                               tAGCCTCCAGTCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCa                                       <  1:166757/150‑1 (MQ=255)
                                                                                                                aGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAg                                      <  1:571258/150‑1 (MQ=255)
                                                                                                                aGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAg                                      <  1:1259231/150‑1 (MQ=255)
                                                                                                                aGCCTCCAGGCCATTGTTTTGTCGGTCCTGATCCGGCCTACATTCCGGATCCTG‑AAAAAAAGGGGCCGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAg                                      <  2:323937/150‑1 (MQ=255)
                                                                                                                aGCCTCCAGGCCATTGTTTTGGCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAg                                      <  1:1259342/150‑1 (MQ=255)
                                                                                                                       aGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACgg                               >  1:1514976/1‑150 (MQ=255)
                                                                                                                       aGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACgg                               <  2:697855/150‑1 (MQ=255)
                                                                                                                        ggCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGTGACGAATCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGATTTTACCTGCGCCATGCTTTCCAGAATACGGt                              <  2:1808952/150‑1 (MQ=255)
                                                                                                                         gCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCATGATCCTG‑AAAAAATGGGGACGATTCTAACGACTGTTAGCTTAATTGTCAGTCATCAGTATCAGAAAAGTTTTTACTCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTg                             <  2:933174/150‑1 (MQ=255)
                                                                                                                          ccATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGa                            <  2:1594896/150‑1 (MQ=255)
                                                                                                                          ccATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGa                            >  1:1024775/1‑150 (MQ=255)
                                                                                                                           cATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGAt                           <  2:638165/150‑1 (MQ=255)
                                                                                                                                   tGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCg                   <  1:465700/150‑1 (MQ=255)
                                                                                                                                      cGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCCTGCTTTCCAGAAGACGGTGATTGTTTTCGaaa                >  1:317702/1‑150 (MQ=255)
                                                                                                                                         tCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACgg             >  1:893357/1‑150 (MQ=255)
                                                                                                                                          ccTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACggg            <  2:1919367/150‑1 (MQ=255)
                                                                                                                                          acTGATCCGGCCTACATTCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACggg            <  1:719485/149‑1 (MQ=255)
                                                                                                                                           aggATCCGGCATGTAGGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGt           >  2:352749/3‑150 (MQ=255)
                                                                                                                                            tGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAAGACGGTGATAGTTTTCGAAACGGGtt          >  1:91766/1‑150 (MQ=255)
                                                                                                                                            ggATCCGGCATGTAGGCCGGATCCTG‑AAAATAAGGGGACGATTCTAACGACGGGTAGCTTAATTGTCAGTCATCCGTATCCCCAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGATTACGGTGATAGTTTTCGAAACGGGtt          >  1:1484303/2‑150 (MQ=255)
                                                                                                                                                 cGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAAAACGTGGATAGTTTTCGAAACGGGTATCcgc     >  1:190010/1‑150 (MQ=255)
                                                                                                                                                  ggCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGTTTCcgcg    <  2:1087951/150‑1 (MQ=255)
                                                                                                                                                    ccTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGTTTCCGCGAt  <  2:417256/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCAGTTTTGTCAGCCATCCTGCCCGCTTGCTTGCGCCCCAACCCGCCAGGCGAGTAAGCCATAGTTTCGGCAGAATGTACTGTAGCGAAAGTTTAAATGAATTTAACAAGGTAGCCTCCAGGCCATTGTTTTGTCGTTCCTGATCCGGCCTACATGCCGGATCCTG‑AAAAAAAGGGGACGATTCTAACGACGGTTAGCTTAATTGTCAGTCATCCGTATCAGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGTTTCCGCGAT  >  NC_000913/4390252‑4390549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑