| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3227693 = | 186 (1.350) | 11 (0.090) | 10/276 | 9.3 | 6.1% | intergenic (+26/‑108) | ygjI/ygjJ | putative transporter/putative periplasmic protein |
| ? | NC_000913 | 3227727 = | 169 (1.320) | intergenic (+60/‑74) | ygjI/ygjJ | putative transporter/putative periplasmic protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGCAAAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3227852‑3227693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAG > NC_000913/3227727‑3227873 AGCAAAACTGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAA < 2:882988/150‑1AGCAAAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAA > 1:1348466/1‑150 CAAAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGCAACTATTTTCCCTCTCCTCATCCAGGAAGA > 2:1436254/1‑150 CAAAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGA > 2:995616/1‑150 CAAAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGGAATTATAAAAATATAAAGGCAGCAACTATTATCCCTCTCCTCAGCCAGGAAGA > 2:295439/1‑150 AAAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCACTCTCCTCATACAGGAAGAG > 1:1716140/1‑150 AAAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTGTTATCGTTGTAAATATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAG < 2:177936/150‑1 AAAACGGAAGAGAAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAG < 1:913347/150‑1 AAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGG > 1:724941/1‑150 AAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGG < 2:314919/150‑1 AACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGG < 1:1390789/150‑1 ACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGA < 1:1318142/150‑1 CGGCAGATCAAGTAATGCTCTGCATGGTTCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTCATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAA < 1:1085609/150‑1 CGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAA > 2:2073417/1‑150 CAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAAT > 1:1927572/1‑150 AGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAttg > 1:421839/1‑147 TGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTT < 1:1881113/150‑1 TCATTGTGATAATCCATGAGCTAAAGAAAAACTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAA < 1:875869/150‑1 GCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTAAAACGATAAAAGGCTGTACTTTTTCTTTA > 2:454004/1‑150 ATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAAT > 2:1916393/1‑150 AAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTGTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCAT > 1:398416/1‑150 AACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGC > 1:1387476/1‑150 ATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTG > 1:1978580/1‑150 TTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGTCTGTACTTTTTCTTTAGCTCATGGATTAACACAAAGAAATTAATCACTGCACCATTCATACCATTACTTGCTCTtc > 2:319566/1‑148 TCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGT > 1:1174730/1‑150 TCCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGT > 1:1660636/1‑150 CCCTCTCCTCATCCAGGAAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTT > 2:1338899/1‑150 AGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGC < 1:1845141/150‑1 AGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGC > 1:1596638/1‑150 GAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCG > 2:282729/1‑150 GGGAAAATAGTTTCTGCCTTAATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGATCATGGATTAACACAAAGAAATTAATCACTGCACAATGCAGATAATTACTTGCTCTGCCGATTTGCTACGCCTTTTATGCGtc > 2:1447069/1‑148 GGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCA < 1:646327/150‑1 GGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACAATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCA > 1:690287/1‑150 GGAAAATAGTTTCTGCCTTTATATATAAAAAATTACAACGATAAAAGGATGTACTTTTTCATTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTAGTTGCTCTGCAGATTTGATACGGCTTTTCTGAGGat > 1:1483991/1‑148 GAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATATAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACCCAATGAATTTAATAACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAG > 2:119025/1‑150 GAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAG < 2:1728127/150‑1 GAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGACGTTTTGCTACGCCTTTTCTGCGGCAG > 2:384146/1‑150 AATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAG < 1:1458742/150‑1 AGCAAAACGGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3227852‑3227693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAG > NC_000913/3227727‑3227873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |