| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4503856 = | 276 (2.000) | 12 (0.090) | 10/284 | 9.5 | 4.5% | intergenic (‑425/‑202) | insG/yjhB | IS4 transposase/putative MFS transporter, membrane protein |
| ? | NC_000913 | 4503881 = | 247 (1.880) | intergenic (‑450/‑177) | insG/yjhB | IS4 transposase/putative MFS transporter, membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGGAGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4504011‑4503856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagttttATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGGGC > NC_000913/4503881‑4504030 GGGAGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTAC < 1:119106/150‑1GGGAGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTAC > 2:38090/1‑150 GGAGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACA < 1:860976/150‑1 GGAGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGGTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGCTACCCACCTACc > 2:437372/1‑149 GAGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCAGTCTATGAAAGATAAAACTGATACCCACCTACAt > 1:156324/1‑149 GAGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAt > 2:1240336/1‑149 AGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAGT > 2:1801723/1‑150 GCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAGTT > 2:943761/1‑150 CTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAGTTTT > 1:510851/1‑150 CTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAGTTTT > 2:483829/1‑150 CTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAGTTTT > 2:1458806/1‑150 CTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTAATGATTGTTATCAATACCTAATCAGTACAATCTTTTACTCCATTTCTTCATAACATAATACACTCTATGAAAGATAAAACTGATACCCACCTACCGTTTa > 1:351578/1‑149 TCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAGTTTTATGTTTCATAGAGTGTAATATGTTTTGTATATATGGTGGAAAAGATTGTACTGATTAGGT > 2:87225/1‑150 TCACTCTATGAAAGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATT > 2:1795269/1‑150 ACTCTATGAAAGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTC > 1:1061463/1‑150 CTCTATGAAAGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCT > 1:1947435/1‑150 CTCTATGAAAGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCT > 2:584048/1‑150 TCTATGAAAGATAAAACTGATACCCCCCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTG > 1:584412/1‑150 ATGAAAGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGAT > 1:2136629/1‑150 TGAAAGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATA > 2:1993142/1‑150 AAAGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATT > 2:1193919/1‑150 AGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTtt > 1:919951/1‑148 AGATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGAGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGT > 1:1512193/1‑150 GATAAAACTGATACCCACCTACAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATAAATAGTACTGGAGTATTTGAAGACAATATAATTATTTCTGGATATTGTT > 1:654499/1‑150 CAGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTT > 2:1040323/1‑150 AGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTT > 2:2061343/1‑150 AGTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTT < 1:1444788/150‑1 GTTTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTA > 2:1512655/1‑150 TTTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAG < 1:813261/150‑1 TTATCTTTCATAGCGTGAAATATGTTACGAAGAAATGTAGGAAAAGATTGTACTGATTACGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGG < 2:2028295/150‑1 TTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGG < 2:370238/150‑1 TTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGG < 2:1513975/150‑1 TTATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTGGAGGCTCCCTAATATTTACTTTAAGG < 1:1885637/150‑1 TTATCTTTCATACAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACGGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGG < 2:206281/150‑1 TTATCTATAATAGAGTGAAATATGTTAAGAAGAAATGGATGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATACTTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGG < 1:124409/150‑1 TATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGGt > 1:442567/1‑149 TATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGGG < 1:1487374/150‑1 TATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAA‑TATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGGGC < 2:428160/150‑1 GGGAGCCTCAACAATATCCAGAAATAATTATATTGTCTTCAAATACGCCAGTACTATTGATTGTTATCAATACCTAATCAGTACAATCTTTTCCTCCATTTCTTCTTAACATATTTCACTCTATGAAAGATAAAACTGATACCCACCTACAGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4504011‑4503856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagttttATCTTTCATAGAGTGAAATATGTTAAGAAGAAATGGAGGAAAAGATTGTACTGATTAGGTATTGATAACAATCAATAGTACTGGCGTATTTGAAGACAATATAATTATTTCTGGATATTGTTGAGGCTCCCTAATATTTACTTTAAGGGC > NC_000913/4503881‑4504030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |