BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	145 [0]	[1] 145	[rph]–[rph]	[rph],[rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	132 (1.020)	99/278	0.1	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
*	?	NC_000913	3815941 =	0 (0.000)	132 (1.020)	99/278	0.1	100%	pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

Only 100 of 145 total aligned reads displayed.

GACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGG  >  NC_000913/3815798‑3816090

aacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgcctcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcccc                                                                                                                                                 >  2:1626054‑M2/144‑150 (MQ=255)

  cacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgcctcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGGCCCCTg                                                                                                                                               >  2:1661620‑M2/142‑150 (MQ=255)

       gcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACtt                                                                                                                                          >  2:1709059‑M2/137‑150 (MQ=255)

       gcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACtt                                                                                                                                          <  1:1778436‑M2/14‑1 (MQ=255)

        cttgctaatggcaaattcaataaactggcgctgatatggtttcatggcttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcactcgccttaaatatcagtttgccagggccgccttctgcCGTCCCCTGCACTTc                                                                                                                                         <  2:248882‑M2/15‑1 (MQ=255)

        cttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTc                                                                                                                                         <  1:271321‑M2/15‑1 (MQ=255)

           gctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaccgcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAat                                                                                                                                      <  1:227182‑M2/18‑1 (MQ=255)

           gctaagcgaaaattaattaaactggcgcttatattgtttcatgccttcgctcctcatcttacttttcaacagacaaaaaaacggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAat                                                                                                                                      <  1:2021399‑M2/18‑1 (MQ=255)

             taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatga                                                                                                                                    >  2:932850‑M2/131‑150 (MQ=255)

                gcgcaaattcaataacctggcgctgatatggtttcatgccttcgctcctcatcttacttttctacacacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgcctccttctgcCGTCCCCTGCACTTCAATGATgc                                                                                                                                 <  2:1933936‑M2/23‑1 (MQ=255)

                      attcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCcgg                                                                                                                           >  2:540407‑M2/122‑149 (MQ=255)

                         caataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCtt                                                                                                                        >  2:789384‑M2/119‑150 (MQ=255)

                           ataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGAGCCAGTCTTCg                                                                                                                      >  1:776549‑M2/117‑150 (MQ=255)

                            taaactggcgctgatatggtttcatgccttcgctcctcatcttacttttcaacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCgg                                                                                                                     <  2:1783121‑M2/35‑1 (MQ=255)

                               actggcgctgatagggtttcatgccttcgcgcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtca                                                                                                                  <  2:1752122‑M2/38‑1 (MQ=255)

                                ctggcgctgatatggttgcatgccttcgctcctcatcttacttttctaccgacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcat                                                                                                                 <  2:245625‑M2/39‑1 (MQ=255)

                                      ctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAc                                                                                                           >  1:1630671‑M2/106‑150 (MQ=255)

                                        gatatgttttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGt                                                                                                         <  2:112049‑M2/47‑1 (MQ=255)

                                        gatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGt                                                                                                         >  1:1317412‑M2/104‑150 (MQ=255)

                                        gatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGt                                                                                                         >  2:1257582‑M2/104‑150 (MQ=255)

                                          tatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgcctccttctgcCGTCCCCTGCACTTCAATGATGCCCCCGTCTTCGGTCATCACTACGTTc                                                                                                       >  1:57617‑M2/102‑150 (MQ=255)

                                          tatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTGCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                                       >  2:446974‑M2/102‑150 (MQ=255)

                                          tatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                                       <  2:172145‑M2/49‑1 (MQ=255)

                                          tatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgaCGTCCCCTGCACTTCAATGATGCGCCCGTGTTCGGTCATCACTACGTTc                                                                                                       >  1:64378‑M2/102‑150 (MQ=255)

                                            tggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttatgcCGTCCCCTGCACTTCAATGATGAGCCCGTCTTCGGTCATCACAACGTTcaa                                                                                                     >  2:200282‑M2/100‑149 (MQ=255)

                                             ggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgcctaaaaaataagtaagccagcgccgccttcttcAGTCCCCAGCACTTCAATGATGCCCCCGTCTACCGTCATCACTTCGTTCATg                                                                                                    >  1:1562653‑M2/99‑150 (MQ=255)

                                               tttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTc                                                                                                  >  2:868990‑M2/97‑150 (MQ=255)

                                                  catgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                               >  2:2240695‑M2/94‑150 (MQ=255)

                                                  catgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                               >  1:1841311‑M2/94‑150 (MQ=255)

                                                    tgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtct                                                                                             >  2:1965857‑M2/92‑150 (MQ=255)

                                                    agccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagttttccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCATCACTACGTTCATGTCGGtct                                                                                             >  2:1221240‑M2/92‑150 (MQ=255)

                                                     gccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtctc                                                                                            >  1:802974‑M2/91‑150 (MQ=255)

                                                     gccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtctc                                                                                            >  2:748051‑M2/91‑150 (MQ=255)

                                                     gccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtctc                                                                                            >  1:1906236‑M2/91‑150 (MQ=255)

                                                     gccttcgatcctcatattacttttctaaagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtctc                                                                                            <  2:561801‑M2/60‑1 (MQ=255)

                                                      ccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTctct                                                                                           >  1:25088‑M2/90‑150 (MQ=255)

                                                       cttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTg                                                                                          <  2:2205215‑M2/62‑1 (MQ=255)

                                                            ctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCa                                                                                     <  1:2786‑M2/67‑1 (MQ=255)

                                                            ctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCa                                                                                     >  1:881406‑M2/84‑150 (MQ=255)

                                                             tcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCag                                                                                    <  2:1527836‑M2/68‑1 (MQ=255)

                                                             tcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCag                                                                                    >  1:1996858‑M2/83‑150 (MQ=255)

                                                               ctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCagag                                                                                  >  1:1863860‑M2/81‑150 (MQ=255)

                                                                 catcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTc                                                                                >  1:148782‑M2/79‑150 (MQ=255)

                                                                 catcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTc                                                                                >  2:2260414‑M2/79‑150 (MQ=255)

                                                                 catcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaataagtttgccagcgccgccttctgcCGTCACCTGCACTTCAATGAAGCGCCCGTCTTCGGTCATCACTACGTTCATGTAGGTCTCTGCGGCAGAGTc                                                                                >  1:572499‑M2/79‑150 (MQ=255)

                                                                  atcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCt                                                                               <  2:1313045‑M2/73‑1 (MQ=255)

                                                                   tcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgcaagcgccgcattctgcCGTCCCATGAACTTCAATGATGCGCCCGTCTTCGTTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                              >  1:1595908‑M2/77‑150 (MQ=255)

                                                                    cttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCCATGATGCGCCCGGCGTCGGTCATCACTACTGTCATGTCGGTCTCGGCGGCAGAGTCTTc                                                                             >  2:2241498‑M2/76‑150 (MQ=255)

                                                                    cttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTc                                                                             <  1:1270598‑M2/75‑1 (MQ=255)

                                                                    cttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgacgccttctgcCGTCCCCTGCACGTCAATGATTCGCCCGTCTTCGGTCATCACTCCGTTCATGTCGGTCTCTGCGGCAGAGTctta                                                                             >  2:1580768‑M2/76‑149 (MQ=255)

                                                                     ttacttttctacagacaaaaaaaaggcgactaatcagtcgccttaaaaatcagtttgccagagacgacttctgcAGTCACATGCACTTCAATGATGCGCCCGTCTTCGGTCATCAATACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCa                                                                            >  1:2155820‑M2/75‑150 (MQ=255)

                                                                      tacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAAGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa                                                                           >  1:1652054‑M2/74‑150 (MQ=255)

                                                                        cttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACg                                                                         <  1:33201‑M2/79‑1 (MQ=255)

                                                                          tttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTa                                                                       <  2:221408‑M2/81‑1 (MQ=255)

                                                                             ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgcccgcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGGCATCCCTCCGTTCCTGGCGGTCTAGGCGGCCGAGTCTGCACCGGATTc                                                                    >  2:1137372‑M2/67‑150 (MQ=255)

                                                                             ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTc                                                                    >  1:2031318‑M2/67‑150 (MQ=255)

                                                                             ctacagacaaaaaaaaggcgactcatcagtagccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTc                                                                    >  1:1640776‑M2/67‑150 (MQ=255)

                                                                              tacagacaaatacaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCGTGCATTTCAATGCTGCGACCGTCATCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTcc                                                                   <  1:440914‑M2/85‑1 (MQ=255)

                                                                                cagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAg                                                                 >  2:13624‑M2/64‑150 (MQ=255)

                                                                                cagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGGCATCACTACGGTGATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTGCAg                                                                 >  1:1899749‑M2/64‑150 (MQ=255)

                                                                                cagacaaaaaaaaggcgactcatcagtcgccataaaaatcagtttgccagccccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTAGGTCATCACAACGTTCAAGTCGCTCTCGTCTTCAGAGTCTACAACGTATTGcat                                                                 >  1:1072537‑M2/64‑149 (MQ=255)

                                                                                 agacaaaataaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGa                                                                <  1:278308‑M2/88‑1 (MQ=255)

                                                                                  gacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                               >  2:1775832‑M2/62‑150 (MQ=255)

                                                                                  gacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                               <  2:1353282‑M2/89‑1 (MQ=255)

                                                                                   acaaaaaaaaggctactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCACTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATc                                                              <  2:1099712‑M2/90‑1 (MQ=255)

                                                                                    caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGGATTACAGATCg                                                             >  1:2054472‑M2/60‑150 (MQ=255)

                                                                                    caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTACAGATCg                                                             >  2:1961241‑M2/60‑150 (MQ=255)

                                                                                     caaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGc                                                            >  2:732958‑M2/59‑150 (MQ=255)

                                                                                     aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGc                                                            <  2:2075335‑M2/92‑1 (MQ=255)

                                                                                      aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACGTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCACCGTATTCCAGATCGCa                                                           >  1:571376‑M2/58‑150 (MQ=255)

                                                                                       aaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaa                                                          <  1:1024583‑M2/94‑1 (MQ=255)

                                                                                          aaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGCTCGCAAAcc                                                       >  2:462185‑M2/54‑150 (MQ=255)

                                                                                           aaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGGCTTCAACGTATTCAAGATCGCAAAACg                                                      >  2:1684444‑M2/53‑150 (MQ=255)

                                                                                            aggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGc                                                     <  1:2118085‑M2/99‑1 (MQ=255)

                                                                                                gactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCg                                                 <  1:1499524‑M2/103‑1 (MQ=255)

                                                                                                    catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGt                                             >  1:908117‑M2/44‑150 (MQ=255)

                                                                                                    catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCATCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCTTCAACGTATTGCAGATCGCAAACCGCTTCGCCGt                                             >  1:309340‑M2/44‑150 (MQ=255)

                                                                                                     atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt                                            <  1:536240‑M2/108‑1 (MQ=255)

                                                                                                        agtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcac                                         >  2:1908333‑M2/40‑150 (MQ=255)

                                                                                                        agtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcac                                         >  2:1040816‑M2/40‑150 (MQ=255)

                                                                                                        agtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcac                                         >  2:1036396‑M2/40‑150 (MQ=255)

                                                                                                        agtagccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCGTGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcac                                         <  1:1940303‑M2/111‑1 (MQ=255)

                                                                                                          tcgccttaaaaatctgtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCTTGTCGGTCTCTGCGGCAGAGTCTTCATCGTATTCCAGATCGCAAACCGCTTCGCCGTtcacac                                       <  1:923474‑M2/113‑2 (MQ=255)

                                                                                                           cgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTGCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGCTCGCAAACCGCTTCGCCGTTCAcaaa                                      >  1:300950‑M2/37‑149 (MQ=255)

                                                                                                            gccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAAtt                                     >  2:2256328‑M2/36‑150 (MQ=255)

                                                                                                            gccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAAtt                                     >  1:1792871‑M2/36‑150 (MQ=255)

                                                                                                              cttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTcc                                   <  2:2212732‑M2/117‑1 (MQ=255)

                                                                                                                taaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                                 <  1:868990‑M2/119‑1 (MQ=255)

                                                                                                                 aaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAc                                <  1:828674‑M2/120‑1 (MQ=255)

                                                                                                                  aaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCAGACa                               <  2:572499‑M2/121‑1 (MQ=255)

                                                                                                                   aaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAg                              <  1:1230616‑M2/122‑1 (MQ=255)

                                                                                                                            tgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCgg                     <  1:2190490‑M2/131‑1 (MQ=255)

                                                                                                                              ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCt                   <  1:932850‑M2/133‑1 (MQ=255)

                                                                                                                                    ccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATc             >  1:10285‑M2/12‑150 (MQ=255)

                                                                                                                                      gccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATccc           <  2:811433‑M2/141‑1 (MQ=255)

                                                                                                                                         ttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCttt        <  1:1965857‑M2/144‑1 (MQ=255)

                                                                                                                                         ttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCttt        <  1:37780‑M2/144‑1 (MQ=255)

                                                                                                                                         ttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCttt        <  2:2031318‑M2/144‑1 (MQ=255)

                                                                                                                                              ccGTCCCCTGCACTTCAATGATGCGCCAGTCTTCGGTCATCACTACGTTCATGTCGGGCGCTGCGGCAGAGTCTTCACCGTATTCCAGAGCGCAACCCGCTGCGCCGGTCACGATTCCGCAAGACACTGCGGCTACCAGCCCTTGCATCg   >  2:2123106/1‑150 (MQ=255)

                                                                                                                                              cCGTCCCATGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCg   <  1:1647546‑M2/149‑1 (MQ=255)

GACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGG  >  NC_000913/3815798‑3816090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`