| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3295753 = | 242 (1.030) | 3 (0.010) | 3/264 | NT | 1.4% | coding (360/396 nt) | yraN | UPF0102 family protein |
| ? | NC_000913 | 3295787 = | 208 (0.940) | coding (394/396 nt) | yraN | UPF0102 family protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGTCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCACTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3295908‑3295753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccactcaTAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGGCAA > NC_000913/3295787‑3295933 GCGTCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATC < 1:1447720/150‑1GCGTCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATC < 1:1832723/150‑1GCGTCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATC < 1:1832729/150‑1 CGTCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCC > 2:2048139/1‑150 GTCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCA > 2:552417/1‑150 TCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCAC > 1:1548537/1‑150 TCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCAC < 2:1877860/150‑1 ATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCACTC > 1:2214024/1‑150 ATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCACTC < 1:828242/150‑1 ACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCACTCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCC > 1:884917/1‑150 CTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCACTCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCG > 2:3233439/1‑150 TCATTAAAGGCATCCTTAATCCACTCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCT < 1:3233439/150‑1 CACTCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGG > 1:798555/1‑150 CACTCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGG < 1:2409073/150‑1 CACTCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGG > 1:1413871/1‑150 ACTCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGGC < 2:333835/150‑1 TCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGGCAA > 1:1127078/1‑150 TCATAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGGCAA > 1:2962662/1‑150 GCGTCATGGCTGCACGGGAGATGGCATCCGGAAGCGCCTCTGCCGCCGCAATTTGAGTTTGAATGCTTTCAGTGAAGCAAGCTTTAATTCTTTCTTGCACGCTAATCCTTAAACCTTAATTATGAGTGGTCATTAAAGGCATCCTTAATCCACTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3295908‑3295753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccactcaTAATTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGGCAA > NC_000913/3295787‑3295933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |