| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,132 | C→G | 5.6% | intergenic (+115/‑83) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,132 | 0 | C | G | 5.6% | 610.8 / 19.4 | 167 | intergenic (+115/‑83) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (125/32); new base G (5/5); total (130/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 167 total aligned reads displayed.
CTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGC > NC_000913/3780985‑3781280 | cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCg < 2:3924172/150‑1 (MQ=255) tGGCTCCCATGGCGACAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 2:2212256/150‑1 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 2:3184022/150‑1 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 2:1576502/150‑1 (MQ=255) tGGCGCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 2:1348182/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 1:916233/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 2:3462133/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 1:3954712/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACACTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 1:3954679/150‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCgggg < 1:118921/150‑1 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga < 2:480945/150‑1 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCTCACCCTACCCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 2:1726241/150‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCCCCCCCCAACCCACACCCCCCCGGCGCGGGGCCCCGTCGGCGCGGGAGGTACACCCCCACACAGAAACCACC‑CCCCCCCCGTTTTTTCAACCCCCCCCCCCCcgggcggg > 1:3478920/1‑146 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAgg < 2:3225015/150‑1 (MQ=255) tGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAggga < 1:3698402/150‑2 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGcc < 1:1592355/150‑1 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGTGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAgggaga < 1:846521/150‑4 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCTCTACCACAGGGGGAGGGGACCGTTCGGCGCTGTATGTTCTCCCGCACGCTGAAACGACA‑CCCCACTCTTTTTTTATCCCTCGCCCCTCCGGGGAGAGGGCCg > 2:267537/1‑150 (MQ=255) aaGGGAATGCGGCATAGTCGTTTTCGCCCCCCCACCCACAAACCCTACCACAGGGTGTGGGGACCGGTAGGCGCGGTTTGTAAACCCACACTCAGAAAAGGCA‑CCGCACACTTTTTTTATCCCACGCCCCGCCGGGGAGAGGGCCcgggg > 2:3201302/1‑149 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCCAAACCACACCCGCAGGGGGATGGGGCCCGGCGGCGCGGTATTTAATACCCCACACTGAAA‑AACACCCCCACAAGTTTTTTATACCGCGCCCCCCCCGGGGGGGGGGCggggg > 2:3119140/1‑149 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 2:1013352/150‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCGCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 2:2993381/150‑1 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCACACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 1:2000561/150‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑aaaa < 2:2590796/150‑1 (MQ=255) ggCATAGTCGTGTGCGCCCCCTCACCCTAACCCTCCCCCTCAGGGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑aaaa < 2:1768068/150‑1 (MQ=255) tttGCGCCCCCTCACCCTAACCCACTACCTCAGGGAGAGGGGACCGTTCGGCGCAGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCAACCTCGCCCCACCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTg > 2:362401/1‑150 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACAGCTCAc > 1:3724185/1‑150 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAAtt > 1:3415211/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg > 1:1353115/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg > 1:3889184/1‑150 (MQ=255) aCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTAt > 1:629681/1‑150 (MQ=255) cccTCTCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATATTCTGCTATc > 1:1623754/1‑150 (MQ=255) ctctCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 1:1112318/1‑150 (MQ=255) ctctCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 1:2344426/1‑150 (MQ=255) ctctCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 1:2344414/1‑150 (MQ=255) ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 1:2955181/1‑150 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 1:1737156/1‑150 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTC‑TTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc > 2:542697/1‑150 (MQ=255) ctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCACTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc > 1:3392167/1‑150 (MQ=255) tcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc > 1:1916037/1‑150 (MQ=255) ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc > 2:256188/1‑150 (MQ=255) agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTaa > 2:2700013/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AACAGGCCGCACTGCTCACCAATTATCTGCTAACCTGCCCCCGCACTAAgggg > 2:1549657/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCTCTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:1140708/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:2116689/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:2734214/1‑150 (MQ=255) ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg > 1:1182420/1‑150 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 2:973539/1‑150 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 1:138414/1‑150 (MQ=255) gcgcTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa > 2:1552668/1‑150 (MQ=255) gcgcTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCATCCGGGGAGGGGGCCGGGGTGCG‑GGG‑AAAAGGCCGCCCTGCTCACCAATTTTCTGCTAACCTGCCCCCGCACTACGGGGGCAGAATGCTa > 1:1522032/1‑150 (MQ=255) tgtaCTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCCCTAAGGGGGCAGTATGCTAAACATCGt > 2:3033567/1‑150 (MQ=255) tgtaCTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt > 2:1247835/1‑150 (MQ=255) tgtaCTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt > 2:510711/1‑150 (MQ=255) tgtaCTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt > 2:3033616/1‑150 (MQ=255) aCTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 2:2276570/1‑150 (MQ=255) aCTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 1:1243943/1‑150 (MQ=255) tCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGa > 2:1426776/1‑150 (MQ=255) tCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGa > 2:2091593/1‑150 (MQ=255) tctGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 1:3141407/1‑150 (MQ=255) tctGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 2:2237366/1‑150 (MQ=255) tGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 1:3825370/1‑150 (MQ=255) tGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 1:3775410/1‑150 (MQ=255) tGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 1:3825789/1‑150 (MQ=255) gAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaa > 2:1099189/1‑150 (MQ=255) gAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGACCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaa < 2:105317/150‑1 (MQ=255) aaCGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAt > 2:902397/1‑150 (MQ=255) cccaca‑cCGCACTCTTTTTCCCCCCCCCGCCCCGGGGGGGTGTGGGGGGGGGTGCG‑GGC‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAtt < 1:3592458/147‑1 (MQ=255) gACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTcc > 2:2297580/1‑150 (MQ=255) gACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTG‑CCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCCGAAATTCCg > 1:730422/1‑150 (MQ=255) gACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAAATTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTcc > 2:2297937/1‑150 (MQ=255) cccgaattttttttCCCCCCCCCCCCCCGGGGGGGGGGGGGGGGGTGTGCGGGCAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGcc < 2:254102/143‑1 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 2:2235725/1‑150 (MQ=255) tgtttttttCCCCCACGCCCTGGGGGGGTGGGGGGGGGGGGGCG‑GCC‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt < 1:2271933/148‑1 (MQ=255) tctTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 2:3676132/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:304556/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 2:3176805/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:2627348/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 2:3292674/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:758805/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTATGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:537143/1‑150 (MQ=255) ttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCaa > 2:1705925/1‑150 (MQ=255) tactcCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACGAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACGGGCAAca > 1:600558/3‑150 (MQ=255) cggcccTCTCCCCGGAGGGGCGAGGGCCGGGGGGAG‑GGG‑CAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACGAAGGGGGCAGTATGCGAAACATCGTACTTTACGAACCAGAAATTCCGCCAACTACTGGCACcag > 2:2622585/4‑149 (MQ=255) cggcccTCTCCCCGGAGGGGCGAGGGCCGGGGGGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcat > 2:1033092/4‑150 (MQ=255) tcCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatca > 1:331709/1‑150 (MQ=255) ccTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑CAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACatcatc > 2:1850848/1‑150 (MQ=255) ccTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTACGGGGGCAGTCTGCTCAACATCGTACTTTACGAACCAGACATTCCGCCAAATACTGGCACCatcatc > 1:175262/1‑150 (MQ=255) ccTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACatcatc > 1:2827837/1‑150 (MQ=255) ccTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACatcatc > 1:3239997/1‑150 (MQ=255) ccTCGCCCCTCCGGGGAGAGGGCCGGGGGGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTCTCCTGCCCCCGCACTAAGGGGGCAGTATGCTCAACATCGTACTTTACGAACCAGACATTCCGCCAAATACTGGCAACatcatc > 1:175352/1‑150 (MQ=255) cTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 2:3301909/1‑150 (MQ=255) cTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 1:3667612/1‑150 (MQ=255) cTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 2:1062940/1‑150 (MQ=255) cTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 1:101687/1‑150 (MQ=255) tCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 2:302956/1‑150 (MQ=255) tCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 2:3952128/1‑150 (MQ=255) cGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGt > 2:3071108/1‑150 (MQ=255) cTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 2:372360/1‑150 (MQ=255) cTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 2:1396212/1‑150 (MQ=255) | CTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG‑GGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGC > NC_000913/3780985‑3781280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |