| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4530882 = | 636 (1.110) | 5 (0.010) | 3/268 | NT | 0.82% | coding (770/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| ? | NC_000913 | 4530984 = | 602 (1.090) | coding (668/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4531035‑4530882‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACAC > NC_000913/4530984‑4531132 TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG > 2:5866752/1‑150TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG < 1:1035829/150‑1TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG > 1:7032734/1‑150TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG > 2:2523795/1‑150TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG > 2:5875576/1‑150TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG > 1:4049257/1‑150TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG > 2:5876814/1‑150TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG > 2:834038/1‑150TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGG > 1:2109068/1‑150 GGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGG > 2:6767437/1‑150 GGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGG > 2:9688580/1‑150 GGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGG > 2:1338621/1‑150 GGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGG > 1:5304365/1‑150 GGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGG > 1:5304348/1‑150 GGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGG > 1:3082226/1‑150 GTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTTCACGATTATTCCGAGGTCAGGATTTATCAGGGC < 1:5719526/150‑1 GTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGC < 1:8415676/150‑1 GTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGC > 2:1345461/1‑150 CGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACC > 2:4772683/1‑150 TATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGA > 1:1976266/1‑150 TATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGA > 1:4409144/1‑150 CATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATC < 2:4409144/150‑1 CATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATC < 2:1976266/150‑1 GGCGTAATACGGGACCAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGC > 1:4854578/1‑150 GGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGC > 1:911694/1‑150 GGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGC > 1:2432090/1‑150 GGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGC > 1:3300057/1‑150 GGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGC > 1:4854896/1‑150 GGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGC < 1:1977129/150‑1 cCGTAATACGGCAACAAAGCCGCGGAAAATAAATACTACCTCTACCCAACCCACCAGATAAACGCCGATATCAAGCTCCATAGTACTGATACCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGAACGTCTAGTGCTTTACTGCA < 2:6311314/149‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA < 2:7837516/150‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA < 2:7837155/150‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA < 2:6040219/150‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA < 1:5072135/150‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA < 2:5693752/150‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA < 1:5473785/150‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA > 2:3848569/1‑150 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA < 2:9169787/150‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCATTACTGCA < 2:4227554/150‑1 GCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGAATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCA > 2:8526366/1‑150 CGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCAC > 2:1984518/1‑150 CGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCAC > 2:8737813/1‑150 GTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACA > 1:8782309/1‑150 GTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACA > 1:8782033/1‑150 GTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACA > 1:8782390/1‑150 GTAATACGGGAACAAGGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACA < 1:1662241/150‑1 TAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACAC > 1:5268727/1‑150 TAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACAC > 2:4441312/1‑150 TAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACAC < 1:6041018/150‑1 TGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4531035‑4530882‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGCCTAGACGATCGTCTAGTGCTTTACTGCACAC > NC_000913/4530984‑4531132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |