| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 164,581 | A→C | 18.6% | intergenic (+47/‑149) | hrpB → / → mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 164,581 | 0 | A | C | 18.6% | 401.4 / 32.2 | 217 | intergenic (+47/‑149) | hrpB/mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Reads supporting (aligned to +/- strand): ref base A (59/113); new base C (2/43); total (61/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.38e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 225 total aligned reads displayed.
CCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCA > NC_000913/164432‑164730 | ccGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa > 2:2373635/1‑150 (MQ=255)ccGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa > 2:7101457/1‑150 (MQ=255)ccGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa > 1:2471742/1‑150 (MQ=255) cGTGCGGTGCAAAACGAGATGAACGGGCGTTATCCCACCCCGGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt < 2:8270984/150‑1 (MQ=38) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt > 1:1140257/1‑150 (MQ=255) tGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCa < 2:6165692/150‑1 (MQ=255) agAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACAGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGTGCCGGGGTGAGGGCATCa < 2:7733643/149‑1 (MQ=255) cAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCa > 1:206882/1‑150 (MQ=255) aaaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCAc > 2:6752315/1‑150 (MQ=255) aaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACg > 1:2226766/1‑150 (MQ=255) gttGAAAGGGGTTTATCCCAAACTTGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTACGTTTGGTTTTCTCCCTCTCCCTGTGGGAGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTtcacc < 2:1471018/148‑1 (MQ=38) gaTGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgggac > 1:9009565/1‑145 (MQ=255) aTGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACggggaccc > 1:7029739/1‑143 (MQ=255) aTGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgggccc > 2:2840041/1‑144 (MQ=255) tGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTtcacccc > 1:8669138/1‑149 (MQ=255) tGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTgcccccg > 1:1382181/1‑149 (MQ=255) aatgggCTTTATCCAAAACTTTTGGGGCGGGCCCACCCGGAAAATCCTGCCCCGCCGCGACGTACTAAAATTTATTCTTATGGTGGTTTTTCTCCCTCCCCCTGGGGTTGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTtcaccctca < 2:9140280/147‑1 (MQ=255) aatgggCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGTACGAAAATGTTTTCGTATGGTTGGTTTTCCCCCTCTCCCTGTGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTtcaccctca < 2:1390663/147‑1 (MQ=38) tgggCTTTATCCCAAACTGGTCTGGCCGGACGACCCGGAAAATACTGCCCCGACGCGACGGACGAAAATGTTTTCGTATGTTTGTTTTTCTCCCTCCCCGTGTGGTTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTtcaccctcacc < 2:602528/149‑1 (MQ=255) aTCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCAAAacca > 1:1350903/1‑149 (MQ=255) cccAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCGCCCCCACCCAAAaccaca > 1:1498456/1‑147 (MQ=38) ccAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGCCCCCCACCCAAACCCcctc > 2:1554108/1‑150 (MQ=38) ccAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGGCCCACACCCCAAaccaaaa > 1:5162349/1‑146 (MQ=37) ccAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGCCCCGCCCCCAAACCcacta > 1:6064634/1‑149 (MQ=37) cAAACTTGTGTGGCCGTCGGCCCCGCAAAATACGCCCCCGACGCGCCGGACTAAAATGTTTTCTTATGTTTGTTTTTCCCCCTCCCCCTGTGGGAGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTcc < 2:3000493/150‑1 (MQ=255) cAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGAGGGACGAAAAAGTATTCGTATGTTTGTTTTTCTCCCTCTCCCTGTGGGTGAGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTcc < 2:7012915/150‑1 (MQ=38) cAAACATGTCGGGCCGGACGCCCCGGCAAATCCGGCCCCGCGGGGACGGACGAAAATGTATTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTcc < 2:4628663/150‑1 (MQ=37) aTGTCTGCCCGCACCACCCGCCAAATCCTCCACCTACGCGAGTGACGAAAATTTATTCGTAAGGTTGTTTTACACCCTCTCCGTTTGGTTTCGGGCGGGGTTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCaa < 1:9177871/150‑1 (MQ=255) tttCTGGCCGGACGCCCCGCCAAATACTGCACCGACGCGACGTACGAAAAATTATTCGTATGGTTGGTTTTCCCCAGCCCCCTGGGGGATTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAg < 2:3499879/148‑1 (MQ=255) tGTCTGGCGGGCCGACCCGTCAATTACTGCACCGACGCGACGGACTAAAAAGTATTGGAATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAg < 1:8668393/150‑1 (MQ=37) tCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCCCGGGCACCCGCCCCCCAACCCACGCCCCCAAggg > 2:7958758/1‑150 (MQ=37) tCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGACCCACACCCGAAACCACACCCACAAcgg > 2:1379358/1‑150 (MQ=37) tGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGACCCGCACCCCCACCCACACCCACACgggcg > 1:3004856/1‑148 (MQ=37) gCCGGACGACCGGCCAAAGTCGGCCCCGCCGCGAGGCACTACAAAGCATTGGTACGGTTGGTTTCCGCCCTCGCCCGGGGGGCGTGGGCGGGGGTGCGGGCCTCCGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTTGAGGGagag < 2:4431026/150‑1 (MQ=255) ccGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAGCAGCGCGCACGGGCGCCCGCACCCAAAACCACTCCCACAACGGAGAgg > 1:9501135/1‑150 (MQ=37) cGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGGGCCCCCACACCCCAAACCGCACCCCCACCGGAGAggg > 1:9331439/1‑150 (MQ=25) ccGGCAAATACTCCACCGCCGCGACTGACCAAAATTTATCGGTATGGTTGGTTTTCCCCCTCCCCGTGTGGGTGGGGGCGGGGGTGGGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATc < 1:8448254/150‑1 (MQ=255) cGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCCCCCCACCCCAAAACCACAACCACAACGGAGAGGGGCCCCATCg > 1:7774483/1‑150 (MQ=25) cGGCAAAGACGGCCCCGCCGCGACGGACGAAAACGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGTGCGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCg < 2:647948/150‑1 (MQ=38) ggCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCCCCCGCACCCAAAACCACACCCACCACGGAGAGGGGGccccaccc > 2:9564891/1‑144 (MQ=25) gCAAATCCGGCACCGAGGCGCCGGCCTAAAAAGTTTTCGTATGGTTGGTTTGCTCCCTCCCCCTGTGGGAGTGGGCCGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:8038232/150‑1 (MQ=255) gCAAATACTGCACCGCCGCGACGGACGAAAAAGTATTCTTATGGTGGGTTTTCTCCCTCTCCCTGTGGGCGCGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:3909219/150‑1 (MQ=38) caaaaaACTGCCCCGCCGCGACGGACCAAAATTTTTTCTTTCGGTTGTTTTTCCCCCTCGCCGTGTGGGTTTGGGCGGGGGTGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:9213046/148‑1 (MQ=255) aaaTACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGTGCAACCACACCCAAACCCACACCCCCCAGGGGCGGGGGCCCGCTCgcccc > 2:5891263/1‑146 (MQ=25) aaaTACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGGCCCGCCACCAAAACCACTCCCGCAAGGGTGGGGGGTCCGATCGGG‑‑cc > 1:1640876/1‑149 (MQ=25) aaaGACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCCCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑ca < 2:3288669/150‑1 (MQ=255) aTACTGCACCGACGCGACGGACTAAAAATTATTCTTATGGTTGTTTTTCGCCCTCTCCCTGTGGGTGAGGGCGGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑caca < 1:6254948/150‑1 (MQ=255) cACCGCCGCGAGGGACGAAAATGTTTTCGTACGGTTGGTTTTCCCCCTCCCCGTGTGGTCGCGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAAtttt < 1:1289881/150‑1 (MQ=255) cACCGACGGGCCGGACGAAAATGTATCGGTAAGTTTGGTTTTCGCCCCCTCCCTGGGGGAGCGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAAtttt < 2:8402080/150‑1 (MQ=255) cACCGACGCGACGGACGAAAAAGTTTTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGTTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAAtttt < 2:4077002/150‑1 (MQ=255) cctccgcgacgGCCGAAAAAGTATTCGTATGTTTGGTTGTCGCCCTCTCCGTGTGGGTGTGGGCGGGGTTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTACCCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTga < 2:6069977/146‑1 (MQ=255) ccgccgCGCCGGACGAAACAGTATTCGTTCGGTGGGTTTTCTCCCTCTCCCGGTGGGCGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTga < 2:1128826/150‑1 (MQ=38) ccGACGCGCCGGACGAAAAAGTATTCGTTAGGTGGGTTTTCTCCCTCGCCCGGTGGGTGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTga < 1:6369568/150‑1 (MQ=255) ccGACGCGACGGACGAAAAAGTATGCGTAAGGTTGGTTTTCGCCCTCTCCCGGTGGGAGTGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTga < 2:6142938/150‑1 (MQ=255) gacgcgacgGACGAAAAATTTTTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGTGAGGGCCGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTgaga < 2:8721978/150‑1 (MQ=255) acgcgacgGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCTCACCCAAACCCTCTCCCCCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTtagag > 1:4291444/1‑150 (MQ=255) gacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATAtcttc < 2:688931/150‑1 (MQ=255) cgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCACCCGCACCCAAAACCACGCCCGCAACGGCGTGGGGCACCATCGAGCCCAAAAATTTTGAGatatattaat > 2:9431263/1‑146 (MQ=16) aaattttttCGTATGGTTGTTTTTCCCCCTCTCCGTGTGGGTGTGGGCGGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTg < 1:593501/143‑1 (MQ=255) aaaaTTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTg < 1:1230075/150‑1 (MQ=39) aaaaGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCCCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTg > 2:2285994/1‑150 (MQ=255) acgTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGGGGGAGCGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTc < 2:9285968/148‑1 (MQ=255) acgTATGCGTAAGGGGGGTGTGCGCCCTCTCCCTGGGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTGTGAGAGATATCTTCTTCTGTc < 2:7940896/148‑1 (MQ=38) tATTCGTATGGTTGGTGTGCGCCCGCTCCCTGTGGGAGCGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTg < 1:5507498/150‑1 (MQ=39) tATGCGTATGGTTGGTTTTCTCCCTCCCCCGGGGGGTGAGGGCGGGGGGGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTg < 2:2678192/150‑1 (MQ=255) tttCGTAAGGTGGGTTGTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGt < 2:7282081/149‑1 (MQ=255) aTTCTTAAGGTTGGATTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGt < 2:2245014/150‑1 (MQ=255) ggTACGGTTGGTTTGCTCCCCCCCCGGTTGGGAGCGGGCGGGGTTGAGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAAc < 2:3786579/149‑1 (MQ=255) gTATGGTTGTTTTTCTCCCTCTCCGTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACa < 2:5475732/150‑1 (MQ=255) gTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTaaaa < 2:9610921/150‑3 (MQ=255) gTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACa < 1:7240554/150‑1 (MQ=255) atggttggttTGCTCCCTCTCCCGGGGGGTGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACaga < 2:4999867/148‑1 (MQ=39) tggttggttTTCTCCCTCTCCCTGTGGTTGCGGGCGGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaa < 1:4801186/149‑1 (MQ=255) gtttttCCCCATCTCCGTGTGGGTGAGGGGCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCTAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACa < 1:8219719/148‑1 (MQ=39) ggttTACCCCCTCTCCCTGTGGGTGAGGGCCGGGGTTCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACa < 1:4886780/150‑1 (MQ=255) ttttCTCCCCCTCCCGGTGGTTGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGa < 1:6001250/150‑1 (MQ=255) tttgcgccctcgcgcgGTGGGAGAGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGa < 2:1237331/144‑1 (MQ=255) cccggccctctcccaCAGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGACCCGCACCCAAACCCAAACCCGAAAGGGGGTGGGGGCCGATCGAG‑‑CACAAATTTTGAGTGATATATTATTAAGTCTTGTAAAATaagaaaagaa > 2:2452632/6‑150 (MQ=16) ctccctctccctGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCCCGGTCACCCTCACCCGAACCCAAACCCTCAAGGGAGTGGGGACCGCTAGAG‑‑CCCGAATTTTGTGAGATATATTCTTCTGTCTTGTAACAGAAGAACAGaaaag > 2:7285021/1‑149 (MQ=25) cctctccggGTGGGCGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑Cgg < 1:2099588/150‑1 (MQ=255) cctctcccgGTGGGTGAGGGCCGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑Cgg < 1:9298717/150‑1 (MQ=255) ccacaccctCTGGCAGAGGCCCGGGGTGAGGCCAACACCGCCCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGAACGAG‑‑CACAAATATTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑Cgg < 2:3094224/145‑1 (MQ=255) tctccctGGGGGTGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGc < 1:3130269/150‑1 (MQ=255) ctGTGGGAGCGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCACTCCCTCAAGGGAGAGGGGACCGCTCGAG‑‑CACAAATTTGGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAACT‑CGGGCTTTTg < 2:5755095/150‑1 (MQ=255) ggtgagGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCt < 1:5716236/147‑1 (MQ=255) gcgcgggCGGGGGTGCGGGCCTCCGCGCGCACGTTCACCCTCACCCTACCCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTg < 1:256531/146‑1 (MQ=255) gagaGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTg < 1:5754414/150‑1 (MQ=255) agagGGCCGGGGTGAGGGCATCAGCGCGCACGGGGACCCCCAACCCAACCCACAACCACAAGGGGGGGGGGGCCCCTCCCGC‑CCCAAATTTTG‑GAGATATAATAATAGGTGTTGTTAAAGAAGAACAGAAAATACGGCCTTTTggcccgg > 2:4846065/1‑144 (MQ=255) ccGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTg < 2:5540377/150‑1 (MQ=255) cGGGGTGCGGCCCTCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGc < 1:7381562/150‑1 (MQ=255) gggtTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCg < 2:5790433/150‑1 (MQ=255) gggtTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCg < 2:5162349/150‑1 (MQ=255) ggggggTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCg < 1:9626094/150‑1 (MQ=255) ggggTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCg < 1:7921650/150‑1 (MQ=255) ggggTGAGGGCATCAGCGCGCACGTTCACCCTCCCCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCg < 2:7884337/150‑1 (MQ=255) ggggTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCg < 1:4023986/150‑1 (MQ=255) ggggTGAGGGCATCAGCGCGCACGGTCACCCTCACCCTTACCCTCTCCCGCAAGGGAGAGGGGACCGATCGAG‑‑CACCAATTGTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGACAAT‑CGGGCTTTTGCGCCTGATTATTGCg < 2:5621513/150‑1 (MQ=255) gtgtGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCGgag < 2:3654171/150‑1 (MQ=255) tGAGGGCATCAGCGCGCACGTTCACCCACACCCAAAAACACAACCACAAGGGGGAGGGGACCCAAAGAG‑‑CACAAAATTTTTGTGATATATTATTATGTCTTGTAAAACAAGAAAAAAAAAA‑CGGGCTTTTGCGCCTGAATATTTCggggg > 2:1079480/1‑147 (MQ=255) ggcgggCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCGgaga < 2:6583727/147‑1 (MQ=255) | CCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAG‑‑CACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAT‑CGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCA > NC_000913/164432‑164730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |