| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4621838 | 106 (0.970) | 4 (0.040) | 3/262 | NT | 3.7% | coding (70/1332 nt) | yjjJ | putative protein kinase |
| ? | NC_000913 | = 4621865 | 111 (1.080) | coding (97/1332 nt) | yjjJ | putative protein kinase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4621684‑4621838‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctggcaaCAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTTGCAGTAAAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTC < NC_000913/4621865‑4621718 CTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCT < 2:540616/150‑1 TCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTG < 1:1023486/150‑1 CCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCTCGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGG < 1:279997/150‑1 CCAGCGTTAATATTTTCTCTATAATTTTCAGTGAAATGTGTTAATAAAGCTATTCAAGTATCTAATCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGG < 2:366936/150‑1 CAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGC < 1:1154847/150‑1 GTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATAAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGAC < 2:1793384/150‑1 TTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAACAAGGCGTGAGAACGGCGCCTGACTGATTGCCAGACG < 2:1747551/150‑1 TTAATAAAACTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACG < 2:337891/150‑1 AATTAATCTATTCAAGTATCTATTCACGAATCTATTCATTACTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCT < 1:788806/150‑1 TCTGGCAACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTTGCAGTAAAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATATATTAACA > 2:1662550/1‑150 TCTGGCAACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTAGCAGTAAAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACA > 2:1819669/1‑150 TCTGGCAACAAGGCGTGAGAACGTCGCCTGACTGATAGCCAGACGCTCGCGCAATTCCCGGGCAGAACGCGGCCCTTGCAGTAAAAGCTCAGTCAGCTAGAGCATTAATGAATAGATTCTTGAAATGATACTTGAATAGATTTATTAACA > 2:177931/1‑150 CTGGCCACAAGGCGTGAGAACGTCGCCTGACTGATTGCCATACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTTGCAGTAAAAGATCAGTCAGCTCTCTCATTAATGAATAGATTCGTGAATAGATACTTGCATAGATTTATTAACAC > 2:1128792/1‑150 TGGCAACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTTGCAGTAAAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACA > 2:721078/1‑150 GGCAACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTTGCAGTAAAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTTACACAT > 1:113564/1‑150 GGCAACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTTGCAGTAAAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACAT > 2:212605/1‑150 AACAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTTGCAGTAAAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTTACACATTTC > 2:156990/1‑150 CTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4621684‑4621838‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctggcaaCAAGGCGTGAGAACGTCGCCTGACTGATTGCCAGACGCTGGCGCAATTCCGGGGCAGAACGCGGCCCTTGCAGTAAAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTC < NC_000913/4621865‑4621718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |