New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2258692 =82 (0.750)4 (0.040) 3/270 NT 5.1% coding (605/942 nt) psuK pseudouridine kinase
?NC_000913 2258736 = 68 (0.640)coding (561/942 nt) psuK pseudouridine kinase

TCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACAGTCCGC  >  NC_000913/2258587‑2258879
                                                                                                                                                     |                                                                                                                                               
tCACCGCTGCTAGCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCACTCGGTTCAGGCCATGTGGATGGAACCAGGCAGCAACTTTTGCCACATCATCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCgg                                                                                                                                                 <  1:1658414/150‑1 (MQ=255)
tCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCgg                                                                                                                                                 <  1:1585851/150‑1 (MQ=255)
   ccGCTGCTATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGttt                                                                                                                                              >  1:251338/1‑150 (MQ=255)
   ccGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGttt                                                                                                                                              <  2:569108/150‑1 (MQ=255)
   caaaatgccgcccacgtacccctaattgccgatccggtttcggcatggaaatgtgtcatagagcgcgaccgtcaaaatcagatccacactctcaagccaaacCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGttt                                                                                                                                              >  2:1258253‑M1/103‑150 (MQ=255)
    cGCTCATATCGCTGTAATAAACGCCGTCGCCGCACATGCTCAATACGAGTCGTTTTAGTCCATGATGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTg                                                                                                                                             <  2:271438/150‑1 (MQ=255)
     gCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTgg                                                                                                                                            <  2:1552429/150‑1 (MQ=255)
     gCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGCTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTgg                                                                                                                                            <  1:793465/150‑1 (MQ=255)
      cTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGc                                                                                                                                           <  1:1495875/150‑1 (MQ=255)
       tGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCt                                                                                                                                          <  2:1426874/150‑1 (MQ=255)
       atgccgccaacgtacccgtatttgtcgatccggtttcggcattgaaatgtgtcaaagtgcgcgaccgtctaaatcagatccacactctcaagccaaacCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCt                                                                                                                                          >  2:463876‑M1/99‑150 (MQ=255)
       atgccgccaacgtacccgtatttgtcgatccggtttcggcatggaaatgtggcaaagtgcgcgaccgtctaaatcagatccacactctcaagccaaacCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCt                                                                                                                                          >  2:1219288‑M1/99‑150 (MQ=255)
          tatCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGATCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTga                                                                                                                                       <  2:180710/150‑1 (MQ=255)
             cGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCATTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGagag                                                                                                                                    <  1:1816971/150‑1 (MQ=255)
             cGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGagag                                                                                                                                    <  2:665051/150‑1 (MQ=255)
             cGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAAACCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGagag                                                                                                                                    >  2:1605775/1‑150 (MQ=255)
               gtGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCTGTTTGGCTTGAGAgtg                                                                                                                                  <  2:483205/149‑1 (MQ=255)
                tGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAgtgt                                                                                                                                 <  1:1576964/150‑1 (MQ=255)
                 gTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGtgtg                                                                                                                                <  2:596375/150‑1 (MQ=255)
                   aataaACGCCGTCGCCGCCCATGCTCAATACCAGGCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGa                                                                                                                              <  1:619283/150‑1 (MQ=255)
                     taaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATc                                                                                                                            <  2:1513511/150‑1 (MQ=255)
                      aaaCGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCt                                                                                                                           >  1:787191/1‑150 (MQ=255)
                       aaCGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCCCTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTg                                                                                                                          <  2:722970/150‑1 (MQ=255)
                         cGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGAt                                                                                                                        <  1:554554/150‑1 (MQ=255)
                         cGCCGTCGCCGCACATGCTCAATACGAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGAAACTTTTGACACTTCTTCACGGCCTGACAGCGCAATCCCACTGAGGGTTTCGGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGAt                                                                                                                        <  2:621467/150‑1 (MQ=255)
                            cGTCGCCGCCCATGCTCAATCCCAGTCGGTTCAGGCCATGATGCTGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCCCTCAGGGCTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTa                                                                                                                     <  2:800155/150‑1 (MQ=255)
                               cgccgcCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGAc                                                                                                                  >  1:1818519/1‑150 (MQ=255)
                                gccgccCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACg                                                                                                                 <  1:1645182/150‑1 (MQ=255)
                                 ccgccCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACgg                                                                                                                <  2:502022/150‑1 (MQ=255)
                                    cccATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcg                                                                                                             >  2:434498/1‑150 (MQ=255)
                                     ccATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgc                                                                                                            >  2:745892/1‑150 (MQ=255)
                                         gCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCAc                                                                                                        <  1:1550672/150‑1 (MQ=255)
                                          cTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt                                                                                                       <  2:647732/150‑1 (MQ=255)
                                          cTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt                                                                                                       >  1:61790/1‑150 (MQ=255)
                                           tCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGGGGATCTGATTTAGACGGTCGCGCACtt                                                                                                      <  1:919359/150‑1 (MQ=255)
                                            cAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCCCTCAGGGTTTCCGCTTCAAGGCGGTGTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt                                                                                                     >  2:1129712/1‑150 (MQ=255)
                                            cAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt                                                                                                     >  1:1819789/1‑150 (MQ=255)
                                            cAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt                                                                                                     >  2:1020957/1‑150 (MQ=255)
                                               tACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGac                                                                                                  <  1:484992/150‑1 (MQ=255)
                                               aaCCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGGGGATCTGAGTTAGACGGTCGCGCACTTTGac                                                                                                  <  1:1262725/149‑1 (MQ=255)
                                                 ccAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGGTTTGCGTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGacac                                                                                                >  1:1175070/1‑150 (MQ=255)
                                                           cAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGc                                                                                      <  1:729171/150‑1 (MQ=255)
                                                               ccATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCACGGGTTCCGCTTCAAGGCGGTTTTGCTTGAGAGTGTGGAGCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGaa                                                                                  <  2:403998/150‑1 (MQ=255)
                                                                  tGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAAcc                                                                               <  2:695647/150‑1 (MQ=255)
                                                                   gTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTCATTTAGACGGTCTCGCACTATTACACAATTCCATGCCGAAACCg                                                                              >  2:1291888/1‑150 (MQ=255)
                                                                       aTGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGAGCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATc                                                                          <  2:524751/150‑1 (MQ=255)
                                                                       aTGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTCCCGCTTCAAGTCGGTTTGGCTAGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGAGACATTTCCATGCCGAAACCGGATc                                                                          <  1:299956/150‑1 (MQ=255)
                                                                        tGGAACCATGCAGCAACTTTTGCCACATCTTGACGCCCTGACAGCGCAATCCCTCTCAGGGTTTCCGCTTCAATGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCg                                                                         <  1:938236/150‑1 (MQ=255)
                                                                        tGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCg                                                                         >  2:1849675/1‑150 (MQ=255)
                                                                             ccAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACaaa                                                                    <  2:863985/150‑1 (MQ=255)
                                                                                 gcagcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACg                                                                >  1:35216/1‑150 (MQ=255)
                                                                                  cagcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACgg                                                               >  2:1715243/1‑150 (MQ=255)
                                                                                    gcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGt                                                             <  1:340008/150‑1 (MQ=255)
                                                                                       aCTTTTGCCACATCTTCACGCCCTGTCAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGAGGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACg                                                          <  2:795220/150‑1 (MQ=255)
                                                                                         ttttGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTATCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGtt                                                        <  1:152824/150‑1 (MQ=255)
                                                                                              ccACATCTTCACGCCCTGACAGCGCAATCCCACTCTGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTggcgg                                                   <  2:874580/150‑1 (MQ=255)
                                                                                                 agccaaaccgccttgaagcggaaaccctgagtgggattgcgctgtcagggcgGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGCCACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCAt                                                >  2:1219288‑M2/53‑150 (MQ=255)
                                                                                                 agccaaaccgccttgaagcggaaaccctgagtgggattgcgctgtcagggcgGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCAATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCAt                                                >  2:463876‑M2/53‑150 (MQ=255)
                                                                                                  aTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGCCTTGAGAATGTGGATCTGATTTAGACGGGCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCAtt                                               <  2:251338/150‑1 (MQ=255)
                                                                                                    cTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTAt                                             <  2:373765/150‑1 (MQ=255)
                                                                                                     aaaccgccttgaagcggaaaccctgagtgggattgcgctgtcagggcgGTTTGGCTTGAGAGTGTGGATCTGATTTTGACGGTCGCGCTCTATGACACATTTCCATGCCGAAACCGGATCGGCAATTAGGGGTACGTGGGCGgcattttg                                            >  2:1258253‑M2/49‑147 (MQ=255)
                                                                                                        caGCCCTGACAGCGCAATCCCAGTCAGGGGTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAATCCGGATCGACAATTACGGGTACGTTGGCGGCATtatcgag                                         >  2:1756409‑M1/3‑147 (MQ=255)
                                                                                                        aCGCCCTGACAGCGCAATCCCCCTCAGGGTTTCCGCTTCCAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAg                                         <  1:745892/150‑1 (MQ=255)
                                                                                                         cGCCCTGACAGCGCAATCCCACTCAGGTTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTAGATCTCATTTATACGGAATAAAAATATAAAAAATTTCAATGCCGAAACCGGATCTACAAATACGGGTAGGTTGGCGGCATTAGCAAGa                                        >  2:1284366/1‑150 (MQ=255)
                                                                                                         CGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGa                                        <  2:753577‑M1/150‑1 (MQ=255)
                                                                                                             cTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATcc                                    <  1:787443/150‑1 (MQ=255)
                                                                                                             cTGACAGCGCAATCCCACTCAGGGTTTCCGCATCAAGGCGGTTTGGCTTGAGAGTGTGGATCAGATTTAGACGGTCGCGCACTTTGACACATATCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATcc                                    <  1:1825150/150‑1 (MQ=255)
                                                                                                               gACGGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGCCAAATACGGGTACGTTGGCGGCATTCTCCAGAATCCAt                                  >  2:1540908/1‑150 (MQ=255)
                                                                                                                      gaaaccctgagtgggattgcgcttcaaggcgGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTg                           >  2:955952‑M2/32‑150 (MQ=255)
                                                                                                                      cAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTTGATCTGATTTAGACCGTCGCGCACTTAGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTg                           >  2:1712946/1‑150 (MQ=255)
                                                                                                                      cAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTg                           <  1:958064/150‑1 (MQ=255)
                                                                                                                      cAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTg                           <  1:461803/150‑1 (MQ=255)
                                                                                                                        aTCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGcc                         >  1:1195471/1‑150 (MQ=255)
                                                                                                                          cccACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCctc                       <  1:1605775/150‑1 (MQ=255)
                                                                                                                                cAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGTTCGCTCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACt                 <  1:207603/150‑1 (MQ=255)
                                                                                                                                   gttttCCGATTCAAGGCTGTTTGGCTTTAGAGTGTGGATCTGATTTAGACTGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGTGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGat              <  2:1175070/148‑1 (MQ=255)
                                                                                                                                      ttCCTCTTCAAGGCGGTTTGTCTAGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGTGAACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATAtt           <  1:227935/150‑1 (MQ=255)
                                                                                                                                       tCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTa          <  2:52310/150‑1 (MQ=255)
                                                                                                                                        ccGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTCATTTAGACGGTCGACCAATTTAAAAAATTTCCATGCCGAAACCGGATCGACAAATACGGGTTCGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTaa         >  2:1527344/1‑149 (MQ=255)
                                                                                                                                        ccGCTTCAAGGCGGTTTGGCTTGAGAGTGTAGATCTCATTTATCCCCTAAACAAAAAAAAAAAAAATACATGCCGAACACGGATCGACATATACGGGTACGTTGGCGGCAGTATCCAGAATCCATGCCAGTGCGTGTTGAGTGattgttc         >  2:50409/1‑145 (MQ=255)
                                                                                                                                        ccGCTTCAAGGCGGGTTGGCTTGAGAGTGTGGAGCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTAc         <  1:1181668/150‑1 (MQ=255)
                                                                                                                                         cGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACa        <  2:1509094/150‑1 (MQ=255)
                                                                                                                                             tCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACAGTcc    <  1:1230027/150‑1 (MQ=255)
                                                                                                                                             tCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACAGTcc    <  1:753577/150‑1 (MQ=255)
                                                                                                                                              cAAGGCGGTTCGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGCTCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACAGTCcg   >  2:721528/1‑150 (MQ=255)
                                                                                                                                               aaGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACAGTCcgc  >  1:561037/1‑150 (MQ=255)
                                                                                                                                               aaGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACAGTCcgc  >  1:1800616/1‑150 (MQ=255)
                                                                                                                                               aaGGAGGTTTGGCTTGAGAGTGTGGATCTGATTTTGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACAGTCcgc  <  1:616061/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                               
TCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGATATTACAGTCCGC  >  NC_000913/2258587‑2258879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.