| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,644,540 | A→C | 5.4% | intergenic (‑236/+111) | ydfU ← / ← rem | Qin prophage; uncharacterized protein/Qin prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,644,540 | 0 | A | C | 5.4% | 313.4 / 4.0 | 105 | intergenic (‑236/+111) | ydfU/rem | Qin prophage; uncharacterized protein/Qin prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base A (36/62); new base C (4/3); total (40/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 105 total aligned reads displayed.
CGAGACTGAGAGCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGCTTTTATTC > NC_000913/1644398‑1644688 | cGAGACTGAGAGCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCg > 1:497603/1‑150 (MQ=255) gagaCTGAGAGCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTTCTTGCCTGCACGCACGGGCgg < 1:262829/150‑2 (MQ=255) agaCTGAGAGCTTTCTTAACCTCGACCCCGAGCCTGCGGTAATAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGaa < 2:50628/150‑1 (MQ=255) agaCTGAGAGCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGATTGCGTGAGAATACCGCCCGTTCTTGCCTGCACGCACGGGCggt < 1:361792/150‑3 (MQ=255) gaCTGAGAGCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAAt < 1:223982/150‑1 (MQ=255) cTGAGAGCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTa > 2:1030025/1‑150 (MQ=255) gagaGCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATc > 2:1126548/1‑150 (MQ=255) gCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGaa > 2:438669/1‑150 (MQ=255) tttCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAAtt < 2:635583/150‑1 (MQ=255) ttCTTACCCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGTGGGTGCTGGAACAATACAGACTTGAATGCGTGAGTATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTg > 2:355866/1‑150 (MQ=255) aaCCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAata < 1:1168269/150‑1 (MQ=255) cTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATAttt > 1:435004/1‑150 (MQ=255) tCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATAtttt > 1:860343/1‑150 (MQ=255) tCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATAttat > 2:1643917/1‑148 (MQ=255) cGAACCCGCGCCTTCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTttg < 1:1418210/150‑1 (MQ=255) cGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTttg < 1:1814278/150‑1 (MQ=255) cccGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTttgcgtt > 1:169874/1‑150 (MQ=255) cgcgCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTttgcgttgc > 1:310790/1‑150 (MQ=255) ccgcCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCGGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTttgcgttgcg < 2:453533/149‑1 (MQ=255) cgcCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTtgcgttgcgt > 2:452909/1‑150 (MQ=255) gcCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTg < 2:865366/150‑1 (MQ=255) gcCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTg < 1:69309/150‑1 (MQ=255) gCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGAGAGAGAATACCGCCCGTGCGTGCAGGCAAGAACGTGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCAt > 2:729520/1‑150 (MQ=255) gTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCgg < 1:1252842/150‑1 (MQ=255) tAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGt < 1:1620623/150‑1 (MQ=255) agtatgaatCAGCCCTTCGGCCTGGTCTGCAGTGCATGGAGGGTGCCGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGttt < 2:191007/147‑1 (MQ=255) aatgaatCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTtc > 2:1504347/1‑150 (MQ=255) gaatCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTg > 1:304281/1‑116 (MQ=255) gaatCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTg < 2:304281/116‑1 (MQ=255) gaatCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTcc < 2:716123/150‑1 (MQ=255) tCAGCAATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCATGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGt < 2:758406/150‑1 (MQ=255) cAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTg > 2:1083009/1‑150 (MQ=255) gCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGc < 2:954938/150‑1 (MQ=255) ttCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACgg < 1:228599/150‑1 (MQ=255) cGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGgtg < 2:219990/150‑1 (MQ=255) cGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGgtg < 2:1647497/150‑1 (MQ=255) gCCTGTTCTGCAGTGCATGGAGGGTGCTGGATCCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCTGTTTTCTCCGGTGGCACGGTGtt < 1:263526/150‑1 (MQ=255) gCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGtt < 2:1812857/150‑1 (MQ=255) gCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGtt < 1:726415/150‑1 (MQ=255) cgggtCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGGGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTAc < 1:1601509/146‑1 (MQ=255) cTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTAc > 1:91582/1‑150 (MQ=255) cTGTTCTGCAGGGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTAc < 1:1085291/150‑1 (MQ=255) cTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGAGAGAATACCGCCCGTGCGTGCAGGAAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGc > 1:973769/1‑150 (MQ=255) cTGCAGTGCATGGAGGGTGCGGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGc < 1:212358/150‑1 (MQ=255) tGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCg > 2:1296826/1‑150 (MQ=255) gCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGATTTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCgg < 1:1191150/150‑1 (MQ=255) gCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCgg > 1:933198/1‑150 (MQ=255) cAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCggg > 1:1426175/1‑150 (MQ=255) cAGTGCATGGAGGGGGCTGGAACCATTCAGACTAGACTGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCggg < 1:884955/150‑1 (MQ=255) aGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCgggt > 1:361969/1‑149 (MQ=255) aGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGa > 1:1100614/1‑150 (MQ=255) gTGCATGGTGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGGGCGGGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTGTTCTCCGGTGGCACGGTGTTACTCAGCggagt < 1:1414968/150‑4 (MQ=255) gCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCCGCGGGAGtt > 2:751964/1‑150 (MQ=255) cATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTc < 1:456188/150‑1 (MQ=255) cATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTc > 1:762095/1‑150 (MQ=255) ggAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTAAGc > 1:1147594/1‑150 (MQ=255) gAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGcc < 2:1704227/150‑1 (MQ=255) aGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGccc < 1:991405/150‑1 (MQ=255) tGCTGGAACCATTCAGTCTTGAATGCGTGAGAAAACCGCCCGTGCGTGCAGGCAAGAACCGGCGAATTATCAGAATTTTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCcgcg < 2:188330/150‑1 (MQ=255) tGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCcgcg < 2:1713914/150‑1 (MQ=255) ggCTGGAACCATTCAGACTTGAATGCGTGAGACTACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTGTTCTCCGGTGTCACGGTGTTACTCAGCGGGAGTTCAGCCCcgcg < 2:1706864/149‑1 (MQ=255) gCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCTCGGTGTTACTCAGCGGGAGTTCAGCCCCgcgc > 1:156964/1‑150 (MQ=255) gCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCgcgc < 1:1126548/150‑1 (MQ=255) ggAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTTTCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAg < 1:1023476/150‑1 (MQ=255) ggAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGAGCAGGCAAGAACTGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAg > 2:387967/1‑150 (MQ=255) aaCCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAACAt > 2:725863/1‑150 (MQ=255) gtccggtaGACTTGACTTCGTGAGAATACCGCCCGTGCGGGCAGGCAAGAACGGGCTAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGAGCAAGAtt < 2:1636422/143‑1 (MQ=255) aCCATTCAGACTGGAATGCGTGAGAATACCGCCCGGGCGGGCAGGCAAGAACGGGCGAATTATCAGGAGTGTAATATTTTGCGTAGCGTGCCATCGGTTTGCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGAtt < 1:290614/150‑1 (MQ=255) ccATTCAGACTTGAATGCGTGAGAATTCCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATATTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTg < 1:1320304/150‑1 (MQ=255) cATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGACTTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGt < 1:1650273/150‑1 (MQ=255) aTTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGCACGGGCGAATTATCAGAATTGGAATATTTTGCGTTGCGTGCCATCGGGGTTCTCCGGTGGCCCGGTGTTACTCCGCGGGAGTTCTGCCCCGCGCAAGATTGTa > 2:1563339/1‑150 (MQ=255) ttCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAg < 2:1355199/150‑1 (MQ=255) tCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTTTCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGGGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGa < 1:989913/150‑1 (MQ=255) tCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTgaaag < 2:974851/150‑5 (MQ=255) cAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCAGCGGTTTTCTCCGGTGGCACGGTGTTACACAGCGGGAGTTCTGCCCCGCGCAAGATTGTAGAt > 2:1454388/1‑150 (MQ=255) ttGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGtt < 2:497603/150‑1 (MQ=255) cGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATtctc > 1:898951/1‑150 (MQ=255) cGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATtctc > 1:1304161/1‑150 (MQ=255) gTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTcc < 2:1751793/150‑1 (MQ=255) gTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTcc < 2:860343/150‑1 (MQ=255) gTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTcc < 2:3739/150‑1 (MQ=255) gagaATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTg > 1:1800269/1‑150 (MQ=255) gagaATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTg < 1:438669/150‑1 (MQ=255) gataattcGCCCGTTCTTGCCTGCACGCACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGa > 1:797532/8‑150 (MQ=255) aattcGCCCGTTCTTGCCTGCACGCACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTACCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGaaaa > 2:1393728/5‑150 (MQ=255) aTACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTAAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGaaaa > 2:618091/1‑150 (MQ=255) aCCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAg < 2:1100614/150‑1 (MQ=255) cGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCa < 1:529609/150‑1 (MQ=255) cgtgcgtgCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGaaa > 2:1594925/1‑150 (MQ=255) gtgcgtgcAGGCAAGCACGGGCGAAATTTAAGAATTGTAATATATTGCGTTGCGAGCCATCGTTTTTCTCTCGTGGCACGGGGTTACTCAGCGGGAGGTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCATGAAAAAGCAGaaaa > 2:1829078/1‑150 (MQ=255) cgtgcAGGCAAGACCGGGCGAATTATCAGAATTGTTATATTTTGCGTTGCGTGCCATCGGTTTTCTGCGGTGGCACGGGGTTACTCAGCGGGAGTTCAGGCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGcc < 1:242107/150‑1 (MQ=255) cgtgcAGGCAACCACGGGCGAATTATCAGAATTTTAATATTTTGATTTGCGGGACTTCTGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGcc < 2:77717/150‑1 (MQ=255) gcAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGc < 2:1538112/150‑1 (MQ=255) gcAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGc < 1:452909/150‑1 (MQ=255) cAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGCt < 1:1504347/150‑1 (MQ=255) ggCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGCttt < 2:169874/150‑1 (MQ=255) gCAAGACCGGGCGAATTATCAGTATTTGAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCATCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGCtttt < 1:144768/150‑1 (MQ=255) gCAAGAACGGGCGAATTATCAGATTTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTCGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGCtttt < 1:139252/150‑1 (MQ=255) aGAACGGGCGAATTATCGGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGCTTTTAtt < 1:769948/150‑1 (MQ=255) gAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGCTTTTATTc < 2:18579/150‑1 (MQ=255) | CGAGACTGAGAGCTTTCTTAACCTCGAACCCGCGCCTGCGGTAAGAATGAATCAGCCATTCGGCCTGTTCTGCAGTGCATGGAGGGTGCTGGAACCATTCAGACTTGAATGCGTGAGAATACCGCCCGTGCGTGCAGGCAAGAACGGGCGAATTATCAGAATTGTAATATTTTGCGTTGCGTGCCATCGGTTTTCTCCGGTGGCACGGTGTTACTCAGCGGGAGTTCAGCCCCGCGCAAGATTGTAGATGAGTTTATTCTCCTGAAAAAGCAGAAAAGCCAGCTTTTATTC > NC_000913/1644398‑1644688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |