| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,054,978 | C→A | 6.2% | intergenic (+19/‑83) | shiA → / → amn | shikimate transporter/AMP nucleosidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,054,978 | 0 | C | A | 6.2% | 332.9 / 10.9 | 122 | intergenic (+19/‑83) | shiA/amn | shikimate transporter/AMP nucleosidase |
| Reads supporting (aligned to +/- strand): ref base C (57/57); new base A (2/6); total (59/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.03e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
CACCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGC > NC_000913/2054829‑2055127 | cacCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGatcatc > 2:704315/1‑150 (MQ=255) acCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATcc < 2:662260/150‑1 (MQ=255) acCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATcc > 2:277221/1‑150 (MQ=255) ccTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGCCAGTCAACGCGCTTGCTAGCCTGGCGAAGCTCATCCg > 2:537145/1‑150 (MQ=255) ccTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCg > 1:1633316/1‑150 (MQ=255) ttttATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTTGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGATTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGAt > 1:1394465/1‑150 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTc > 2:1471998/1‑150 (MQ=255) tGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGc > 2:1131255/1‑150 (MQ=255) gCCGCTTCACTCATCACTTACTTTGCCGTGAACTTGCATAGCGTCGCAATTTATTTGCTGGCTGGATGCGTGATTTCCGCAATGACCGCTTTGTTGTTGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCGGATGATCTTCGcc < 2:215384/150‑1 (MQ=255) gCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCGGATGATCTTCGcc < 1:1638414/150‑1 (MQ=255) gCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCGGATGATCTTCGcc < 2:437741/150‑1 (MQ=255) gCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCGGATGATCTTCGcc < 1:1435959/150‑1 (MQ=255) gCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCACTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCGGATGATCTTCGcc < 2:1529115/150‑1 (MQ=255) ccGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCGGATGATCTTCGcca < 1:1234859/150‑2 (MQ=255) cGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCtt > 1:1460845/1‑150 (MQ=255) gCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTa < 2:209922/150‑1 (MQ=255) gCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTacac > 1:705919/1‑150 (MQ=255) aCTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACtt > 2:1788712/1‑150 (MQ=255) cTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACttt > 2:215237/1‑150 (MQ=255) caCTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGttt < 1:1281169/150‑1 (MQ=255) acttacttTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTc < 1:1732285/150‑1 (MQ=255) cttTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGAGTGCCTGGCGAAGATCATCCGATCTTCGCCTTACACGTTTGTTTCAGAtt > 2:312448/1‑150 (MQ=255) ttGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTc < 1:854492/150‑1 (MQ=255) ccGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTAGCTGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCtgt > 1:1499348/1‑150 (MQ=255) cGGGAACTGGGATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCGTTGTTGAGGAAAGACAGTCCACGCGCTTGATAGCCTGGCGAAGAGGATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCtgtg < 2:1123311/150‑1 (MQ=255) gggAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGa < 2:515854/150‑1 (MQ=255) ggAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGAc < 2:559748/150‑1 (MQ=255) cTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATAc < 1:148302/150‑1 (MQ=255) cTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATAc > 1:52782/1‑150 (MQ=255) cTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATAc > 2:1712807/1‑150 (MQ=255) cTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATAc > 1:1100734/1‑150 (MQ=255) ggCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTa > 1:975244/1‑150 (MQ=255) cATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATc > 2:649193/1‑150 (MQ=255) cATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATc > 1:1870730/1‑150 (MQ=255) gCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGAt < 1:1611264/150‑1 (MQ=255) cGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGAtg > 1:1006535/1‑150 (MQ=255) cGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGc < 2:1867548/150‑1 (MQ=255) gCCATTTATTTGCTTGCTGGATGCCTGATTTCAGCAATGACCGCTTTTTTGATGAAAGACAGTCAACTCGCTTGATATCCTTTCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCg < 1:1262043/150‑1 (MQ=255) ccATTTATTTGCTTGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCgg < 2:1545636/150‑1 (MQ=255) ccATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCgg < 1:152879/150‑1 (MQ=255) cATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGt < 1:649193/150‑1 (MQ=255) atttatttGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTa < 1:277221/150‑1 (MQ=255) atttatttGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTa < 2:1288395/150‑1 (MQ=255) atttGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTg < 2:975244/150‑1 (MQ=255) ttGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTa < 2:1534485/150‑1 (MQ=255) ttGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCGGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTa < 1:1031342/150‑1 (MQ=255) tGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTAt > 1:950079/1‑150 (MQ=255) gctggctgGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGGCAACGCGCTTGATAGGCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGTTAATTGTATg < 1:1626050/150‑1 (MQ=255) gctgactgGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATg > 1:1154801/1‑150 (MQ=255) cttgcttgATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGAGCGTGATAGCCTGGCGAATTTCATCCGATCTTCGACTTAAACTTTTGTTTCACATTTCTGTGAAATACTATCGGATGTGCGGTAATTGTATgg < 1:497054/147‑1 (MQ=255) tGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGgaga < 1:787257/150‑1 (MQ=255) gCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGac > 1:164334/1‑150 (MQ=255) ccTGATTTCCGCAATGACCGCTTAGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCtgtg > 1:721987/1‑108 (MQ=255) ccTGATTTCCGCAATGACCGCTTAGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCtgtg < 2:721987/108‑1 (MQ=255) cggATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGacac < 2:503209/148‑1 (MQ=255) gATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGacacac > 2:179959/1‑150 (MQ=255) ccGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGaa < 1:215237/150‑1 (MQ=255) cGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGaat < 1:1788712/150‑1 (MQ=255) aTGACCGCTTTGTGGATGAAAGACAGTCAACGCGCTCGATAGCCGGGCGAAGAGCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAataata < 2:239052/150‑1 (MQ=255) gACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAg > 2:899523/1‑150 (MQ=255) aCCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAgg < 2:1335413/150‑1 (MQ=255) aCCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAgg < 2:1534049/150‑1 (MQ=255) ccGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAggg > 2:174820/1‑150 (MQ=255) tttGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTcc < 1:408616/150‑1 (MQ=255) tgttgATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTGACATTTCTGTGACATAGTATCTGATGTGCGGTAATTTTATGGAACAGGAGAAACACATGAATAATAAGGGCTCCgg > 2:857636/1‑150 (MQ=255) tgttgATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCgg > 1:1530702/1‑150 (MQ=255) ttgATGAAAGACAGTCAACGCGCGTGATAGCCTGGCGAAGATCATCCGATCTTCGACTTACAATTTTTTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATTATAAGGGCTACGGTc < 2:1284504/150‑1 (MQ=255) tgatgaAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCt < 1:1700116/150‑1 (MQ=255) tatgaAAGACAGTCAACGCGCTTGATAGCCTGTCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAACGGCTCCGGTCTg < 2:505559/149‑1 (MQ=255) tgaAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGAc > 2:1157784/1‑150 (MQ=255) gaAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTTCACTTTTGTTTCACATTTATGTGACATACTATCGGATGTGCGGTTATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGAcc > 2:518268/1‑150 (MQ=255) gaAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGAcc > 1:788065/1‑150 (MQ=255) gaAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGAcc < 2:1328607/150‑1 (MQ=255) caaaGACAGTCCACGCGCTTGCTACCCTGGCGAAGATCATCCGATCCTCGCCGTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATCAATAATAAGGGCTCCGGGCTGAcc < 2:1005275/149‑1 (MQ=255) gACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAg < 1:1131255/150‑1 (MQ=255) gACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAg > 2:1186247/1‑150 (MQ=255) aCAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACAATCGGATGTGCGGTAAATGTAGGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGc < 2:332009/150‑1 (MQ=255) aCAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCGTACACTTTTGTTTGACATTTCTGTGACATACTATCGGATGTGCGGTATTTGTATGGAACAGGAGACACACATGAATATTAAGGGCTCCGGTCTGACCCCAGc < 2:1633316/150‑1 (MQ=255) gTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGCCACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCa > 1:568706/1‑150 (MQ=255) gTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCCGCTcc > 2:1831368/1‑149 (MQ=255) gTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCa > 2:1728638/1‑150 (MQ=255) tCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAg > 1:1062532/1‑150 (MQ=255) cAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGGTGTGCGGTAATTGTATGGTACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAgg > 1:56784/1‑150 (MQ=255) gcgcTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAATGGCTCCGGTCTGACCACAGCTCAGGCAcg > 1:1555361/1‑149 (MQ=255) cgcTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTg < 1:1569996/150‑1 (MQ=255) ctggATAGCCTGGCGAAGATCATCCTATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGa < 2:313649/147‑1 (MQ=255) tGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATa > 1:755257/1‑150 (MQ=255) tGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATa > 2:1292051/1‑150 (MQ=255) tGATAGCCTGGAGAACATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATa < 2:1345217/150‑1 (MQ=255) agaggcTGGCGAAGATAATCCGATCTTCGCCTTACAATTTTGTTTCACATTTCTGTGACATACTATCTGATGTGCGGTAATTGTATGCATCAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATaaa < 2:127018/145‑1 (MQ=255) aGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACt > 1:1830898/1‑150 (MQ=255) aGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACt > 1:1053701/1‑150 (MQ=255) aggCGAAGATCGGATGATCTTCGACTTACACTATTGTTACACATTTCTGTGACATACTATAGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTCACCCCAGCTCAGGCACTGGATAAACTCGAc > 2:393208/2‑150 (MQ=255) ggCGAAGATCGGATGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGTACCAGGAGACACACATGAATAATAAGGGATCCGGTCTGACCCCAGATCATGCACTGGAGAAACTCGAcg > 1:296845/1‑150 (MQ=255) cGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGAcgcg > 1:1822456/1‑150 (MQ=255) cGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGAcgcg < 1:1790577/150‑1 (MQ=255) aGATCATCCTATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGACGCGCTg < 2:310201/150‑1 (MQ=255) gATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGACGCGCTGt > 1:10140/1‑150 (MQ=255) catcCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGATTAATAAGGGCTCCGGTCTGACCCCCGCTCAGTCACTGGATAAACTCGACGCGCTGTATg > 2:367402/1‑150 (MQ=255) ccGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGc < 2:566440/150‑1 (MQ=255) | CACCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGATAGCCTGGCGAAGATCATCCGATCTTCGCCTTACACTTTTGTTTCACATTTCTGTGACATACTATCGGATGTGCGGTAATTGTATGGAACAGGAGACACACATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGC > NC_000913/2054829‑2055127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |