| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 289,257 | T→A | 9.2% | intergenic (‑95/+44) | yagI ← / ← argF | CP4‑6 prophage; putative DNA‑binding transcriptional regulator/ornithine carbamoyltransferase 2, chain F; CP4‑6 prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 289,257 | 0 | T | A | 9.2% | 178.6 / 7.1 | 73 | intergenic (‑95/+44) | yagI/argF | CP4‑6 prophage; putative DNA‑binding transcriptional regulator/ornithine carbamoyltransferase 2, chain F; CP4‑6 prophage |
| Reads supporting (aligned to +/- strand): ref base T (51/13); new base A (4/3); total (55/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTCGTCCGTC > NC_000913/289109‑289403 | gTTGAACAGGTCGAGGATCTGCAACGCACGTTCAGCAGACTGAATAATCGGCATAATGCTGGCATGTACACGCTGGAAATAAGGCGAAAACGTACATTATTCGGG‑ATGAAAAATCAATGAAATGGAGCAGGTGTTCTCCCTCTCCCtgtg > 2:1806422/1‑150 (MQ=255)gTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGTCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCtgtg < 1:34757/150‑1 (MQ=255) aCATGTCGAGGAGCTGCAACGCACGTTCAACAGACTGAATAATAGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGgaga < 2:899956/150‑1 (MQ=255) cAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGagag > 2:1706654/1‑150 (MQ=255) tgttCGAGTATTTGAAACCAAAGTTCAAAATATTTAATATTGGGAATATTGCTGCCATTACCAGCATGTAATTAAGGCTAAAAGGTACCTTTTTCGGG‑ATTAAAATTAAAT‑CAATGGAGCCGGTGTTCTCCCTCTCCCACAGGGAGAggg < 2:692661/147‑1 (MQ=255) aGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCACAGGGAGAgg < 1:1664049/150‑1 (MQ=255) gggcGAGGAGCGGCCACGGACGGTCAACAGACTGAATAAGCGGCATAATGCCGGCTTGTCCACGCTGGAATTATGGCGAAAACGTACCTTTTTCGGG‑ATGCAAAATCAATGAACTGGAGCCGGTGTTCTCCCTCTCCCACAGGGAGAggg < 2:145164/147‑1 (MQ=255) ggTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGT‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAggg > 2:896603/1‑150 (MQ=255) gTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAggga > 1:1822780/1‑149 (MQ=255) cGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCg > 2:1590873/1‑150 (MQ=255) cGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCg > 2:661365/1‑150 (MQ=255) cGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCg > 1:222438/1‑150 (MQ=255) aGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCTTGTCCCCGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAAGGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCggg > 1:1222226/1‑150 (MQ=255) aGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCggg > 2:236518/1‑150 (MQ=255) ggATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTGCCTTTTTAGGG‑ATGGTAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCATGTGGGAGAGGGCCgggg > 2:267625/1‑150 (MQ=255) ggATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCgggg > 1:203661/1‑150 (MQ=255) tCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGa > 2:134831/1‑150 (MQ=255) tCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGa > 1:264005/1‑150 (MQ=255) tGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAACTCAATGAAATGGAGCCGCTGTTCTCCCTCTCCCTGAGGGAGAGGGCCGGGGTGAgg > 2:484370/1‑150 (MQ=255) tGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAgg > 2:1835927/1‑150 (MQ=255) tGCAACCCACGTTCAACAGACGGAATAATCGGCATACTGCTGGCATGTCCACGCTGTAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAAGGGAGCCGGTGTTCGCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAgg < 1:1593188/150‑1 (MQ=255) ctgaaCGCACGTTCAACATACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAgg < 2:695384/147‑1 (MQ=255) cAACGCTCGTTCAACAGACAGAATAAACGGCAATATCCTGGCAGGTCCACGCGGGAATTAAGGCGAAAACGTTCCTTTTTCGGG‑ATGAAAAATCAATGTAATGGAGCCGTTGTTCTCCCTCTCCCTGTGGGAGAGGGCCTGGGTGAGGGc < 2:220061/150‑1 (MQ=255) cAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGc < 1:989469/150‑1 (MQ=255) aaCGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa > 2:1317741/1‑150 (MQ=255) ccGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATCAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTTTGGGAGAGGGCCGGGGTGAGGGCAc < 2:1209661/149‑1 (MQ=255) cGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTAGCTTTTTCGGG‑ATGAAAAATCAATTAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAcc < 2:1085078/150‑1 (MQ=255) tCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGTTGAGGGCACCAACgcgc > 2:923132/1‑150 (MQ=255) cAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCACCgcgcc > 2:192586/1‑149 (MQ=255) aaCAGACTGAATAATCGGCATAATGCTGGCATGCCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAATAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACgcgctc > 2:19875/1‑148 (MQ=255) tGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGAccc > 2:1213674/1‑150 (MQ=255) gAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCa > 2:1087377/1‑150 (MQ=255) atCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCAc > 2:1426993/1‑150 (MQ=255) ggCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTcc > 2:1185716/1‑150 (MQ=255) ccATAAGGCTGCCATGCCAACCCGGCAATTACGGC‑AAAACCGACCCTTTTCGGGTATAAAAAATCATTCAAATGGCGCCGGTGTGCTCCCCCTCCCTGGGGGTGAGGGCCGGGGGGAGGGCACCAACGCGCAGCGGACCCAATCACTccc < 2:961134/149‑1 (MQ=255) tGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAAAGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCg > 1:1814545/1‑150 (MQ=255) tGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTg > 1:59420/1‑150 (MQ=255) ggCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGATGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGc > 1:224329/1‑150 (MQ=255) cATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCAGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCca > 2:392576/1‑150 (MQ=255) ccACGCTGGAATTAAGGCGAAACCGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCCACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCatcatc > 2:635269/1‑150 (MQ=255) ccACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCATCGGACCCAATCACACCCCAAGCGTTGCcatcata > 1:1120687/1‑149 (MQ=255) cACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCAtcatca > 2:1788625/1‑150 (MQ=255) cTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACGCCCCAAGCGTTGCCATCATCACCGc > 2:377745/1‑150 (MQ=255) aaTTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGTGCACCAACGCGCAGCGGACCCAATCACTCCCCACGCGTTGCCATCATCACCGCCTTa > 1:175498/1‑150 (MQ=255) aGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACACCCCAAGCGTTGCCATCATCACCGCCTTAATCGt > 2:1660716/1‑150 (MQ=255) ggCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTa > 1:1117499/1‑150 (MQ=255) tACCTTTTCGGGT‑ATTAAAAATCAATTAATTCGCGCCGGTGTCCCCCCTCTCTCTGGGTGTGTGGGCGGGGTTGCGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGt < 2:110143/150‑1 (MQ=255) ccTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGCCCCAATCACTCCCCCAGCGTTGCCTTCATCACCGCCTTACTCGTATGCCTCCGGttt > 1:891586/1‑150 (MQ=38) ccTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGttt > 1:1690564/1‑150 (MQ=255) ggg‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTg > 1:786681/1‑150 (MQ=255) gg‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGATTTCCGCCTgg > 2:174746/1‑150 (MQ=255) aTGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTc > 2:1610736/1‑150 (MQ=255) aTGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTc > 1:1052731/1‑150 (MQ=255) tGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCg > 1:582522/1‑150 (MQ=255) tGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCg > 2:1100483/1‑150 (MQ=255) caaaaaTCAATGAAAGGGCGCCGGTGTCCCCCCTCTCCCTGTGGGCGTGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGa < 1:5108/149‑1 (MQ=255) aaaaTCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCGTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAac > 2:837945/1‑150 (MQ=255) aaaaTCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGACGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAac < 2:1822780/150‑1 (MQ=255) aaaaTAAATTAAATGGAGCCGGTGTTCTCCCGCTCCCGGTGGGAGTGGGCGGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAac < 2:1058060/150‑1 (MQ=255) cAAAGAAATCGAGCCGGTGATCTCCATCTCCCGGTGGGAGAGGGCCCGGGTGAGGGCACCAACGCGCAGCGGCCCCAATCACTCCCCAAGCGTTGCCATCTTCACCGCCTTAATCGTTTGCTTCCGGGTGTCGCCCTGGTCGAACACgcg > 2:1085184/1‑148 (MQ=255) gAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCCCCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTc > 1:1365928/1‑150 (MQ=255) aaTGGAGCAGGTGTTCTCACTCTCCCTGTGGGAGAGGGCCGGGGTGCGGGCACCACCGCGCAGCGGACCCCATCACTCCCCAAGCGTTGCCATCATCCCCGCCTTAAGCGTATGCAGCCGGTTTTCCGGCTGGTCGAAAGAGATGCTcgc > 2:992734/1‑150 (MQ=37) agggtgCCGGGGTTCTCCCTCTCCCGGTGGCTGCGGGCCGGGGTGCGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACTGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTcgcc < 2:264005/145‑1 (MQ=255) tGGCGCCGGGGCTCACCCTCCCCCTGTGGGAGTGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGTTcgccg < 2:20957/150‑1 (MQ=255) gtTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCCAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCaaa > 1:1060123/1‑150 (MQ=255) ccggccctctcccaCAGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGCCCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATACGGTTTTCCGCCTGGTAGAACACGATGCTCACCGCCGACTCAAac > 2:1503211/5‑150 (MQ=255) tctccctctcccTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAaca > 2:707356/1‑150 (MQ=255) ggccctctcccaCAGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCCCTCCCCAAGCGTTGGCATCATCGCCGCCTTAATCGTATGCAGGCGGGTTTCCGCGTGGTCGATCACGATGCTCGCCGGCGAGTCAAaccc > 1:242965/3‑148 (MQ=255) ggccctctcccaCAGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGCCCACGCTGCTCGCCGCCGCCTCAAacac > 1:1823869/3‑150 (MQ=255) ctccctctccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTCTGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGACGACTCaacccc > 1:813914/1‑146 (MQ=255) ctccctctccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAacac > 2:1764818/1‑150 (MQ=255) cctctccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAAGCACCCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAAGACCTc > 2:1207784/1‑150 (MQ=255) tccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTcgtcc > 2:245422/1‑150 (MQ=255) ccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTAGGCATCCGGTGTTCCGCCTGGTCGACCACGATGCTCGCCGCCGACTCAAACCCATcgtcgg > 1:916325/1‑148 (MQ=255) ctGTGGGAGAGGGCGGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGTTCGCCGCCGACTCAAACACCTcgtccgtc < 2:1066538/150‑1 (MQ=255) | GTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGG‑ATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTCGTCCGTC > NC_000913/289109‑289403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |