| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,264 | A→C | 5.2% | intergenic (+34/‑183) | typA → / → yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,264 | 0 | A | C | 5.2% | 348.7 / 6.2 | 122 | intergenic (+34/‑183) | typA/yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (63/50); new base C (4/3); total (67/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
Only 100 of 123 total aligned reads displayed.
CATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGAT > NC_000913/4060119‑4060413 | cATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGc > 2:1014727/1‑150 (MQ=255) aTCGATGATGACGAACTGGGAGCAGTGACTCCGACCTCTATCCGTATGCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCa < 1:899135/150‑1 (MQ=255) cGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTAATCGTAAACGTCACCTGACGGACAACGATCGTCGCCGCGACACCCGCGCACCGAAAGCCGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGAGATGGCAgg > 2:1853635/1‑150 (MQ=255) gatgatGACGAACTGGTAGAAGTGACTCCTTCCTCTATCCGTTTTCGTAAACGGCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGGAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑t < 2:1688315/150‑1 (MQ=255) gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGG‑‑t < 1:204450/150‑1 (MQ=255) atgatgACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑tt > 2:1187764/1‑150 (MQ=255) tgatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑ttt > 1:129765/1‑150 (MQ=255) tgaCGAACTGGTAGAAGTGCCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑tgtttt > 1:1097724/1‑150 (MQ=255) taCGAACTGGGAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑ttttttt < 1:1101096/149‑1 (MQ=255) gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑ttttttt > 2:1305563/1‑150 (MQ=255) ccGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑tttttttt < 2:1788984/149‑1 (MQ=255) aCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAACCTGCCATCGCTGGCAGG‑‑tttttta < 2:992807/150‑2 (MQ=255) aCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑tttttttt > 1:1568950/1‑150 (MQ=255) aCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑tttttttt < 1:711949/150‑1 (MQ=255) cGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑ttttttttt > 1:182504/1‑150 (MQ=255) cGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATATCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑ttttttttt > 2:494737/1‑150 (MQ=255) atcTGTTAGAAGTGAATCCGACCTCTATCCGTATTCGTAATCGTCACCTGACGTAAAACGATCGTCTCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGc < 1:434587/148‑1 (MQ=255) aCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGcc < 1:1014727/150‑1 (MQ=255) tGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGCCGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGCCAGG‑‑TTTTTTTTAGCCTg > 2:1192061/1‑150 (MQ=255) gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTc > 2:973834/1‑150 (MQ=255) tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCg < 2:807575/150‑1 (MQ=255) aGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGACTGTcct > 2:1769876/1‑148 (MQ=255) aGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAg > 1:1839981/1‑150 (MQ=255) cTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAATCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGcac > 2:1657749/1‑150 (MQ=255) cTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTTTGCCTGTCGTGAgcgc > 2:874756/1‑150 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGcaca < 2:254744/150‑1 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGcaca > 2:1346449/1‑150 (MQ=255) ccGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCacac > 1:1729164/1‑150 (MQ=255) cGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACAcc < 2:1020380/150‑1 (MQ=255) ccTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAAt > 1:756012/1‑150 (MQ=255) tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGc > 2:1041282/1‑150 (MQ=255) ctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGT‑TTTTTTTTTGCCTGTCGTGAGCGCACCCCAATGc > 2:1110107/1‑150 (MQ=255) tATCCGTATTCGTAAACGTCACCTGACGGAAAACGATGGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa < 2:602162/150‑1 (MQ=255) aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 1:1177809/150‑1 (MQ=255) aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 1:1339726/150‑1 (MQ=255) gTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtc < 1:1448138/150‑1 (MQ=255) cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTccat > 2:1486708/1‑148 (MQ=255) tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTta < 2:523918/150‑1 (MQ=255) tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTta < 2:1564043/150‑1 (MQ=255) tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTta > 2:592801/1‑150 (MQ=255) aCGTCACCAGACGGAAATAGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATaa < 2:1150119/150‑1 (MQ=255) cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCGCACCAATGCGTGTATCGCCCTTATAAg > 2:118093/1‑150 (MQ=255) cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt > 2:532092/1‑150 (MQ=255) tCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGtg > 1:1817213/1‑149 (MQ=255) cACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCt > 1:1512009/1‑150 (MQ=255) aCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGCGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtg < 2:1113018/150‑1 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGCGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg > 1:1227174/1‑150 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg < 2:1616075/150‑1 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg > 2:1492672/1‑150 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg < 2:1220492/150‑1 (MQ=255) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGTTTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCTGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACTCCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTa > 1:302456/1‑150 (MQ=255) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTa < 1:26722/150‑1 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑GTTTTTTTTGCCTGTCGTGAGCGCACACCAATTCGAGTTTGTGCCGTATAAGTAGTTGGTTAc > 2:1128142/1‑150 (MQ=255) gAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACg > 1:627314/1‑150 (MQ=255) gAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTAAGTCAT‑AAAAAACCTGCCAGCGATGGCAGC‑‑TGATTTTTAGCCTGTAGTGAGCGCACACCAAGGCGACTATCTCCCTTATAAGTCTGTGGGTACg > 2:256732/1‑150 (MQ=255) aaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGACAGAGATGGCAGG‑‑TTTTTTTTTGCATGTCGTGAGCGCACACCAATGCGAGTATATCCCTTATAAGTCTGTGGTTACGTCa > 2:1054158/1‑150 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagt > 2:1688537/1‑149 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga > 1:1048999/1‑150 (MQ=255) cgccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc > 1:460051/1‑150 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCtt > 1:1172555/1‑150 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCATTATAAGTCTGTGGTTACGTCAATAGAGAGCtt > 1:1353560/1‑150 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGACTGTCGTGCGCGCACACCAATGCGAGTATCTACCTTATAAGTCTGTGGTTACGTCAATAGAGAGCtt > 1:349851/1‑150 (MQ=255) cgcgCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTg < 1:532092/150‑1 (MQ=255) gcgcCACCCGCTCACCGAAAGTCGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTTCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTg < 2:1211605/150‑1 (MQ=255) gcgcCAACCGCGCACCTAAAGACTTTTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCTTGGGAAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTg < 2:1376206/150‑1 (MQ=255) gcgcCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTTTCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTg > 1:1445970/1‑150 (MQ=255) gcgcCAACCGCGCACCGAAAGACCATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGAAGGCAGG‑‑TTTTTTTTTGCCTGTAGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGATACGTCAATAGAGAGCTTTg < 2:1217707/150‑1 (MQ=255) cgcCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCGGCCAGCGTTGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGt < 2:451599/150‑1 (MQ=255) gcCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGta > 1:1087204/1‑149 (MQ=255) ccAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTca < 2:688119/150‑1 (MQ=255) cAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTTGTTACGTCAATAGAGAGCTTTGTcac < 2:129765/150‑1 (MQ=255) ccGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATTAGTCTGTGGTGACGTCAATAGAGAGCTTTGTCACAAt > 2:1041431/1‑150 (MQ=255) gcgcACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTa > 1:1021633/1‑150 (MQ=255) gcACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATc < 1:19792/150‑1 (MQ=255) gaactgAATGACGATTATTTTCTTTTTTTAGTCTT‑AAAAAACCTGCCAGCGATGGAAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCGGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATc < 1:1269319/145‑1 (MQ=255) ccGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCTAGCGATGGCAGG‑‑TTTTTTTTTGCCTTTCGTGAGCGCAAACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGCGCTTAGTCACAATTATCTGc > 2:289892/1‑150 (MQ=255) gAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGT‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCa > 1:828242/1‑150 (MQ=255) gACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTc < 2:1128937/150‑1 (MQ=255) aTTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATAc < 1:570221/150‑1 (MQ=255) aaTTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGcc > 1:1329533/1‑150 (MQ=255) aTTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCg < 2:131165/150‑1 (MQ=255) tCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTa > 2:718025/1‑150 (MQ=255) cAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCAAAATTATCTGCAAAGTCATACGCCGTTAATTGctttcttt > 2:1214506/1‑150 (MQ=255) aaaaaaaaaCCTGCCATCGCTGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGctttcttt > 2:591382/4‑150 (MQ=255) t‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCttttt > 1:1201401/1‑150 (MQ=255) aaaaaaaCCTGCCATCGCTGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCttttt > 2:1545287/2‑150 (MQ=255) aaaaaaCCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGGTTTCtttttt > 1:173814/1‑150 (MQ=255) aaaaaCCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg < 2:1473544/150‑1 (MQ=255) aaaaaCCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg < 2:572512/150‑1 (MQ=255) aaaaaCCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg < 1:1178418/150‑1 (MQ=255) aaaaCCTGCCATCGCTGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATTAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTgg > 1:220246/1‑150 (MQ=255) aaaaCCTGCCATCGCTGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTgg > 1:1299123/1‑150 (MQ=255) aaaaCCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTgg < 2:1340852/150‑1 (MQ=255) aaaaCCTGCCAGCGAGGTCAGG‑‑TTTTTTTTTGCCTGTCGTGAGAGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTgg < 2:903945/150‑1 (MQ=255) tggcAGCGATTGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATCAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACTCCGTTAATTGCTTTCTTTTTTGgcgtaag < 1:305696/147‑1 (MQ=255) tGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGgcgtaag > 1:531094/1‑150 (MQ=255) aGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGgcgtaagcgta < 2:1568950/150‑1 (MQ=255) gCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGgcgtaagcgtaa > 1:1316612/1‑150 (MQ=255) gATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGa < 2:646328/150‑1 (MQ=255) aTGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGAt < 2:577011/150‑1 (MQ=255) | CATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGTAAGCGTAAGAT > NC_000913/4060119‑4060413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |