Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,239,609 T→G 8.4% intergenic (+64/‑335) alx → / → sstT putative membrane‑bound redox modulator/sodium:serine/threonine symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,239,6090TG 8.4% 1093.3 / 43.6 378intergenic (+64/‑335)alx/sstTputative membrane‑bound redox modulator/sodium:serine/threonine symporter
Reads supporting (aligned to +/- strand):  ref base T (233/90);  new base G (9/20);  total (244/134)
Fisher's exact test for biased strand distribution p-value = 2.53e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 389 total aligned reads displayed.

GGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATT  >  NC_000913/3239461‑3239758
                                                                                                                                                     |                                                                                                                                                     
   cGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAg                                                                                                                                                   <  2:4535680/150‑1 (MQ=255)
       gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGgag                                                                                                                                               >  1:7413281/1‑150 (MQ=255)
         gtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGagag                                                                                                                                             >  1:8471377/1‑150 (MQ=255)
         gtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTGGAAGGGagag                                                                                                                                             <  1:59627/150‑1 (MQ=255)
         gtTTGGCATTCTGGTGATGACGTTTAGTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGagag                                                                                                                                             <  2:5363426/150‑1 (MQ=255)
          tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAgg                                                                                                                                            <  2:6118669/150‑1 (MQ=255)
          tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTGGAAGGGAGAgg                                                                                                                                            <  2:2449173/150‑1 (MQ=255)
          tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTGGAAGGGAGAgg                                                                                                                                            <  2:7895197/150‑1 (MQ=255)
               cATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCgg                                                                                                                                       >  2:7230185/1‑150 (MQ=255)
                  tcagttgatgaCGTTTATTATCAACGCCTGTGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATATTTAATATGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACAGTTTTCT‑CCCTCTCCCTTCAAGGGAGAGGGTCGGGGt                                                                                                                                    >  1:8275684/6‑150 (MQ=255)
                  tCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGt                                                                                                                                    >  1:8679337/1‑150 (MQ=255)
                    tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                  >  1:235351/1‑150 (MQ=255)
                    tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                  >  1:5222105/1‑150 (MQ=255)
                     ggTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAg                                                                                                                                 >  2:3867718/1‑150 (MQ=255)
                      gTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAgg                                                                                                                                <  2:4337783/150‑1 (MQ=255)
                      gTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAgg                                                                                                                                <  2:1894090/150‑1 (MQ=255)
                          tgaCGTTTATTATCAACGCCTGGTTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTaa                                                                                                                            <  2:2100284/150‑1 (MQ=255)
                           gaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAt                                                                                                                           >  1:3205539/1‑150 (MQ=255)
                             cGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTGTTCT‑CCCTCTCCCTTCCAGGGCGAGGGTCGGGGTGAGGGTAAttt                                                                                                                         >  2:7433560/1‑150 (MQ=255)
                              gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                        >  2:6532433/1‑150 (MQ=255)
                               tttATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                       >  1:7830035/1‑150 (MQ=255)
                                 tattatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTTAGGGTAATTTTTCg                                                                                                                     <  2:4076547/150‑1 (MQ=255)
                                  attatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGc                                                                                                                    >  1:1401569/1‑150 (MQ=255)
                                   ttatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCa                                                                                                                   >  2:2235360/1‑150 (MQ=255)
                                     atCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                                                                                                 >  1:8210213/1‑150 (MQ=255)
                                      tCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                                                                                >  2:7754968/1‑150 (MQ=255)
                                         aCGCCTGGGTGAATTATCGGCATGATAAGCCGCGGGGGGGATAATTTTTAATCTGCCTCAGCCGGGTCCCCTGTCATTAACATGAGCACCGTGTTCT‑CCCTCTCCCTTCCAGGGAGAGGGGCGGGGTGAGGGTAATTGTTCGCACCGATg                                                                                                             >  2:8993037/1‑150 (MQ=255)
                                                gtttaaTTTTCGGCTTTTTAAGCTGGGGGTTGTTTATTTTTTAATCTGCCTAAGCGGTGTACCCTTTAATTAACATGAGCACGTTTTTCC‑CCCTCCCCCTCCCGGGGAGCGGGTGGGGTTGTGGGAAATTTTTCGCACCGATGCTGGCCt                                                                                                      <  2:551021/146‑1 (MQ=255)
                                                    atttATCGGCAGGATAAGCTGGGGGGTGTATATTTTTTAATCTGCCTAAGCGGTGTACCCTGTAATTAAAATGAGCACGTTTTTCT‑CCCTCCCCATCCCCGGGTGTGGGTCGGGGTTCGGTTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                  <  2:3590319/148‑1 (MQ=255)
                                                    aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGTCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                  >  1:3678055/1‑150 (MQ=255)
                                                    aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                  >  1:157085/1‑150 (MQ=255)
                                                    aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                  >  2:8466392/1‑150 (MQ=255)
                                                    aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTACCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                  <  2:5726087/150‑1 (MQ=255)
                                                    aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGCCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCTCCGATGGTGGCCTGTTc                                                                                                  >  2:8194950/1‑150 (MQ=255)
                                                      ttATCGGCATGATAAGCAGGGGGGTGTATAATTTTTAATCGGCCTACGCCGTGTACCCGGTCATTAACATGAGCACGGTTTTCT‑CCCTCGCCCTTCCCGGGAGAGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                                <  2:5181221/150‑1 (MQ=255)
                                                         tCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTc                                                                                             >  2:6406454/1‑150 (MQ=255)
                                                                gATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCTCCGATGCTGGCCTGTTCCCCTCACCCTaa                                                                                      >  1:2331043/1‑150 (MQ=255)
                                                                   aaGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCACACCCTAAccc                                                                                   >  1:4268325/1‑150 (MQ=255)
                                                                     gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctc                                                                                 >  2:6022040/1‑150 (MQ=255)
                                                                      cagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctct                                                                                >  1:8580057/1‑150 (MQ=255)
                                                                          ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTcccc                                                                            >  2:4617949/1‑150 (MQ=255)
                                                                               gtatatTTTTTAATCTGCCTACGCGGTTTACCCTGTCTTTAACATGAGCACCTTTTTCC‑CCCTCCCCCTTCCGGGGTGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCGccccgtttg                                                                       <  1:2081018/148‑6 (MQ=21)
                                                                                gATAATTTTTAATCTGCCTAAGCGGTGTACCCTGTCATTAACATGAGCACCGTTTCCT‑CCCTCTCCCTGCCAGGGTTAGGGTCGGGTTGAGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                                                                      <  2:1261007/150‑1 (MQ=37)
                                                                                gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCACACCCAAACCCTCTCCCCAAACgg                                                                      >  1:7109838/1‑150 (MQ=255)
                                                                                  tattttttATTGTGCCTACGGTGTTTACCCTTTCATTAAATTTAGCACGTTTTTCT‑CCCTCTCCCTTCCTGGGTGTGGGTGGGGTTTTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg                                                                    <  2:8088847/147‑1 (MQ=16)
                                                                                  tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg                                                                    >  2:588231/1‑150 (MQ=255)
                                                                                   attttttAATCGCCCTCCGCGGTGTACACTTTCTTTAAATTCCGCACCTTTGTCT‑CCCACACCGTGCCCGGGTGTGTGTGGGGGTCCGGGCAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGc                                                                   <  1:5525778/148‑1 (MQ=12)
                                                                                     tttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGGCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCgc                                                                 >  2:8791040/1‑149 (MQ=255)
                                                                                      ttttATTCTGCCTACGCCGTGTACCGTGCAATTAACATGAGCACCGTTTTCC‑CCCTCTCCCTTCCCGGGTGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAg                                                                <  2:5698053/150‑1 (MQ=25)
                                                                                       tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgg                                                               >  1:754689/1‑150 (MQ=255)
                                                                                       tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGGTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTCATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgg                                                               >  2:3127334/1‑150 (MQ=255)
                                                                                            tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACt                                                          >  1:9038212/1‑150 (MQ=255)
                                                                                              tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                        >  1:947356/1‑150 (MQ=255)
                                                                                                ccTACGCCGTGTCCCCTGACTTAAACAGGCCCACCGTTTACC‑CCCCCGCCCTTCCTGGGTGTGGGTGGGGGTGTGGGCAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                      <  1:4627613/150‑1 (MQ=18)
                                                                                                 cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg                                                     >  1:799822/1‑150 (MQ=255)
                                                                                                 cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg                                                     >  1:1071649/1‑150 (MQ=255)
                                                                                                  tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGa                                                    >  2:9263440/1‑150 (MQ=255)
                                                                                                   acgCCGTGTACCCTGTCATTAACTTGAGCACCGTTTTCT‑CCCTCTCCCTTCCCGGGAGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAg                                                   <  1:2364079/148‑1 (MQ=255)
                                                                                                           tACCCTGAATTTAAAATGAGCACCGTTTTCC‑CCCTCCCCCTTCCAGGGAGAGGGTCGGGGTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCttttt                                           <  1:3867718/150‑1 (MQ=21)
                                                                                                             cccTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTg                                         >  1:9187525/1‑150 (MQ=255)
                                                                                                              ccTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGa                                        >  2:6933764/1‑150 (MQ=255)
                                                                                                              ccTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGa                                        >  1:7242267/1‑150 (MQ=255)
                                                                                                              ccTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTGTTTTGa                                        >  1:8105216/1‑150 (MQ=255)
                                                                                                               gggTCATTAAAATGTGCACCGTTTTCT‑CCCTCTCCGTTCCTGGGCGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                       <  2:3061740/148‑1 (MQ=25)
                                                                                                               cTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                       >  1:6753300/1‑150 (MQ=255)
                                                                                                                tGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtg                                      >  2:1810434/1‑150 (MQ=255)
                                                                                                                    aTTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttgt                                  >  1:4402157/1‑150 (MQ=255)
                                                                                                                    aTTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttgt                                  >  2:4894054/1‑150 (MQ=255)
                                                                                                                       aaCATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcat                               >  1:3364050/1‑150 (MQ=255)
                                                                                                                         cATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcatca                             >  2:6952033/1‑150 (MQ=255)
                                                                                                                           ggcgCACGGTTTGCT‑CCCTCCCCCTGCCAGGGTGTGGTTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGt                           <  2:5112758/147‑1 (MQ=25)
                                                                                                                            gAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTc                          >  1:6894196/1‑150 (MQ=255)
                                                                                                                             aGCACCGTTTTCT‑CCCTCTCCCTTCCCGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                         <  1:7001235/150‑1 (MQ=255)
                                                                                                                              ccacgttttcCT‑CCCTCCCCCTCCCCGGGTGTGGGGGGGGGTGTGGTAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTg                        <  1:196087/144‑1 (MQ=25)
                                                                                                                              ccACCTTTTACA‑CCCACTCCATACCAGGTATAGGGTCGGGTTTAGGTAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTg                        <  2:8018180/149‑1 (MQ=25)
                                                                                                                               cACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGGTCCCCTCACCCGAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCCAGTCCTGGTTTGTTGTTGTCATCAGTCggg                       >  2:8611547/1‑150 (MQ=255)
                                                                                                                                cgggTTTTCC‑CCCTCTCCCTCCCGGGGTGTGGGGGGGGTTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGa                      <  1:1033759/147‑1 (MQ=25)
                                                                                                                                aCCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGa                      >  2:6762685/1‑150 (MQ=255)
                                                                                                                                aCCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCACTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTTATGTTTTCATCAGTCTGGa                      >  1:6359118/1‑150 (MQ=255)
                                                                                                                                aCCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCACACCCTAACCCTCTCCCCCAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTTATGTTGTCATAAGTCTGGa                      >  1:4116829/1‑150 (MQ=255)
                                                                                                                                  cGTTTTCCCCCCTCCCCCTCCGCGGGTGTGGGGGGGGGTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGaa                     <  2:1675422/150‑1 (MQ=25)
                                                                                                                                   gTTTTCT‑CCCTCTCCCTTCCCGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGc                   <  2:8570608/150‑1 (MQ=255)
                                                                                                                                    ttttCC‑CCCTCCCCCTCCCTGGGTGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGcc                  <  1:8392818/150‑1 (MQ=25)
                                                                                                                                        ct‑ccctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCAc              >  1:2199502/1‑150 (MQ=255)
                                                                                                                                            cctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt           >  2:3707061/1‑150 (MQ=255)
                                                                                                                                             ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg          >  2:1549104/1‑150 (MQ=255)
                                                                                                                                             ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg          >  1:1832510/1‑150 (MQ=255)
                                                                                                                                             ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg          >  1:5639637/1‑150 (MQ=255)
                                                                                                                                             ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCGCCCCCTAACCCACTCCCCAAACGGGGCGCGGGGCCTGACCGAGTCCTTTTTTGATGTTGTCCTCAGTCTGGAAGCCGCACGTTg          >  1:2501348/1‑150 (MQ=255)
                                                                                                                                             ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTAACCTCACCCTAACCCACACCCCAAACGGGGCGAGGGGACGGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGTAAGCCGCACGttt          >  1:299847/1‑149 (MQ=255)
                                                                                                                                             ctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg          >  1:261527/1‑150 (MQ=255)
                                                                                                                                              cctccctTCCGGGGTGAGGGTCGGGGTGCGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg         <  2:252451/149‑1 (MQ=255)
                                                                                                                                                tccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCCCGTTGGCt       >  2:4826510/1‑150 (MQ=255)
                                                                                                                                                tccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCGCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGGTGGCt       >  1:6282609/1‑150 (MQ=255)
                                                                                                                                                  cctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCttt     >  2:9117454/1‑150 (MQ=255)
                                                                                                                                                  cctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCttt     >  2:266171/1‑150 (MQ=255)
                                                                                                                                                   ctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTa    >  1:5114040/1‑150 (MQ=255)
                                                                                                                                                    ttCCGGGGTGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGACTTTAt   <  2:1144120/150‑1 (MQ=37)
                                                                                                                                                    ttCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAt   >  2:5012983/1‑150 (MQ=255)
                                                                                                                                                    ttCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAt   >  2:3375759/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATT  >  NC_000913/3239461‑3239758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑