New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4372705 | 264 (1.020) | 3 (0.010) | 3/262 | NT | 1.1% | intergenic (+34/‑104) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein |
? | NC_000913 | = 4372719 | 271 (1.120) | intergenic (+48/‑90) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein | |||||
Rejected: Frequency below/above cutoff threshold. |
TCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4372549‑4372705 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccccAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTGG < NC_000913/4372719‑4372571 TCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGGAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACA > 1:3325338/1‑150 TGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAA > 1:661083/1‑150 TGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAA < 2:1330269/150‑1 TGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAA < 2:1330328/150‑1 TGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAA > 1:3172886/1‑150 TGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAA > 2:3810908/1‑150 GTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAAC > 1:1872740/1‑150 GTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAAC > 2:2284390/1‑150 GTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAAC > 2:2284395/1‑150 TGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACC > 1:1622577/1‑150 GCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCC > 2:3688146/1‑150 GCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCC > 2:3876835/1‑150 GCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCC < 1:2923857/150‑1 GCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCC > 2:3931724/1‑150 CTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGTTGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCTTGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCC < 1:711019/150‑1 CTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCC < 1:4100828/150‑1 CGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCAGACATTTCTGCCCGGGGG < 1:2155033/150‑1 ACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCCTGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCT < 2:2507946/150‑1 CGATGCCGCTGCCTGAGGCGCTGCGGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACCAACCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAAT < 2:4342179/150‑1 AAACCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCAT > 1:1915877/1‑150 AAACCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCAT > 1:3686898/1‑150 AAACCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCAT > 1:3450613/1‑150 AACCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATT > 2:1027001/1‑150 CCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCG < 2:4085428/150‑1 CCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGT < 1:1868114/150‑1 CCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGT < 2:4180090/150‑1 CCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGT > 2:2183977/1‑150 CCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTG < 1:3305237/150‑1 CCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTG < 2:4191291/150‑1 CCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTG < 1:3305207/150‑1 CCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTG < 2:3782241/150‑1 CCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTG < 1:393318/150‑1 CCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTG < 1:4063567/150‑1 CAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTGG < 2:1644593/150‑1 CAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTGG < 2:1477174/150‑1 CAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTGG < 1:587485/150‑1 CAGACATGTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTGG < 1:3017730/150‑1 TCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4372549‑4372705 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccccAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTGG < NC_000913/4372719‑4372571 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |