Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,959,457 T→G 7.2% intergenic (+12/+75) ilvC → / ← ppiC ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,959,4570TG 7.2% 723.0 / 13.5 256intergenic (+12/+75)ilvC/ppiCketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C)
Reads supporting (aligned to +/- strand):  ref base T (86/146);  new base G (22/2);  total (108/148)
Fisher's exact test for biased strand distribution p-value = 1.67e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 259 total aligned reads displayed.

GCTATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTC  >  NC_000913/3959308‑3959597
                                                                                                                                                     |                                                                                                                                             
gCTATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAt                                                                                                                                               <  2:2763236/150‑1 (MQ=255)
 cTATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATg                                                                                                                                              <  1:1423472/150‑1 (MQ=255)
 cTATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATg                                                                                                                                              >  1:3816520/1‑150 (MQ=255)
  tATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGc                                                                                                                                             >  2:3217216/1‑150 (MQ=255)
  tATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGc                                                                                                                                             >  1:4073672/1‑150 (MQ=255)
      ccGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGcccac                                                                                                                                         >  2:3096540/1‑148 (MQ=255)
       cGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCa                                                                                                                                        >  1:598723/1‑150 (MQ=255)
       cGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCa                                                                                                                                        >  1:1778845/1‑150 (MQ=255)
       cGGAAGGAGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGCa                                                                                                                                        >  2:577737/1‑150 (MQ=255)
         gAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCTCAcc                                                                                                                                      >  1:187298/1‑150 (MQ=255)
           aGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCAcccc                                                                                                                                    >  2:490234/1‑150 (MQ=255)
             gcgcGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGTTGGGGTCACCCCGa                                                                                                                                  >  1:1526559/1‑150 (MQ=255)
               gcgGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGAcc                                                                                                                                <  1:1953222/150‑1 (MQ=255)
               gcgGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGAcc                                                                                                                                <  1:2787028/150‑1 (MQ=255)
                cgGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGAccc                                                                                                                               <  2:1470264/150‑1 (MQ=255)
                  gTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCctc                                                                                                                             <  1:4158992/150‑1 (MQ=255)
                   tAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCTCACCCCGACCcac‑t                                                                                                                           >  1:2876935/1‑150 (MQ=255)
                    aGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCtc‑tc                                                                                                                          <  1:4105973/150‑1 (MQ=255)
                    aGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCtc‑tc                                                                                                                          <  1:649524/150‑1 (MQ=255)
                    aGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCtc‑tc                                                                                                                          <  2:1229927/150‑1 (MQ=255)
                     gATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑Tcc                                                                                                                         <  2:3927463/150‑1 (MQ=255)
                     gATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑Tcc                                                                                                                         <  1:77345/150‑1 (MQ=255)
                     gATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑Tcc                                                                                                                         <  1:2424525/150‑1 (MQ=255)
                      aTAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑Tccc                                                                                                                        >  2:1807724/1‑150 (MQ=255)
                       tAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCGACCCAC‑ACCca                                                                                                                       >  2:1359087/1‑150 (MQ=255)
                       tAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCGCACCCCGCCCCAC‑Acccc                                                                                                                       >  1:2587189/1‑149 (MQ=255)
                          cGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACag                                                                                                                    <  1:3706859/150‑1 (MQ=255)
                          cGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACag                                                                                                                    <  1:2292459/150‑1 (MQ=255)
                           gggCACCTGCGTGATGTGCACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑Tccctgtgg                                                                                                                   <  1:4306354/150‑6 (MQ=255)
                           gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTTAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑Tccctgtgg                                                                                                                   <  1:2920895/150‑6 (MQ=255)
                           gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑Tccctgtgg                                                                                                                   <  1:57693/150‑6 (MQ=255)
                           gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑Tccctgtgg                                                                                                                   <  1:2330343/150‑6 (MQ=255)
                           gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACagg                                                                                                                   <  2:3167871/150‑1 (MQ=255)
                           gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCTCACCCCCAcccac‑acccacacg                                                                                                                   >  1:122118/1‑148 (MQ=255)
                             gCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACcgggc                                                                                                                 >  1:3101658/1‑149 (MQ=255)
                              cAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGCACCCCGACCCTC‑ACCCACagggcg                                                                                                                >  2:3633173/1‑148 (MQ=255)
                                aCTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACagggagag                                                                                                              <  1:2195282/150‑1 (MQ=255)
                                 cTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACagggagagg                                                                                                             <  1:877612/150‑1 (MQ=255)
                                  tGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGCATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACagggagaggg                                                                                                            <  2:816266/150‑1 (MQ=255)
                                   tcGTGATGTGAACGAAGCGATTCGCAGCCATGCTATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACagggagaggga                                                                                                           <  2:2830524/149‑1 (MQ=255)
                                    cGTGATGTGAACGAAGCGATTCGCAGACATGCGATTGAGCATGTAGGTAATAAACTGCGCGGCTATATGACAGATATGAAACGTATTTATGTTGCGGGTTAAGTGCTCGCTGAGTCCCAAACCCCGAACCTCAACCCAca‑ggatagggag                                                                                                          >  1:689592/1‑150 (MQ=255)
                                      tGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCGACCCAC‑TCCCACCGGGAGGGGGAGaa                                                                                                        >  2:1034797/1‑150 (MQ=255)
                                      tGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCTCACCCCCACCCAC‑TCCCACAGGGAGAGGGAGaa                                                                                                        >  2:3067468/1‑150 (MQ=255)
                                         tgtgAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCGACCCAC‑ACCCACAGGGAGAGGGAGAAAac                                                                                                     >  1:2784374/1‑150 (MQ=255)
                                          gtgAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAaca                                                                                                    <  2:2505484/150‑1 (MQ=255)
                                                gAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCCACCCAA‑TACCACAGGGGGAGGGAGAAAAAACACAAg                                                                                              >  2:252664/1‑150 (MQ=255)
                                                     gATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAGCACTCAAGGCCtt                                                                                         <  2:62913/150‑1 (MQ=255)
                                                       ttCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTtct                                                                                       <  2:3972149/150‑1 (MQ=255)
                                                       ttCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCCCAACCCCCCCCAC‑ACCCCCCCGGAGCGGGGGGAAAAACACAAGGcccaga                                                                                       >  2:1476751/1‑146 (MQ=255)
                                                        tCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTtctc                                                                                      <  2:3839852/150‑1 (MQ=255)
                                                           cAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTg                                                                                   <  2:1457671/150‑1 (MQ=255)
                                                           cAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTg                                                                                   <  2:595300/150‑1 (MQ=255)
                                                             gCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGga                                                                                 <  1:1174780/150‑1 (MQ=255)
                                                               cATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGgaga                                                                               <  2:2742611/150‑1 (MQ=255)
                                                                 tGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAg                                                                             <  2:2037043/150‑1 (MQ=255)
                                                                 tGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCAC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCATCTCCGGGAGaac                                                                             >  1:1011445/1‑149 (MQ=255)
                                                                   cGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGc                                                                           <  2:3337008/150‑1 (MQ=255)
                                                                    gATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGcc                                                                          <  2:241813/150‑1 (MQ=255)
                                                                    gATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCAAACCCCCCCCCAA‑AAACACACCGCGAGGGAGCAAAAACAAAACGCCCACTCCTCGAGAACGcc                                                                          >  2:736963/1‑150 (MQ=255)
                                                                    gATTGAGCAGGTAGGGCAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCCCCCCCCCACCCAC‑ACCCACACGGCGAGGGCCAAAACACGCAAGGCCATCTCCGGGAGCAGGcc                                                                          >  2:3523949/1‑150 (MQ=255)
                                                                     aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCt                                                                         <  1:3024189/150‑1 (MQ=255)
                                                                     aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCAGGAGAAGGCCt                                                                         <  2:3364671/150‑1 (MQ=255)
                                                                        gAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACGCAAGGCCTTCTCCAGGAGAAGGCCTTga                                                                      <  2:4226235/150‑2 (MQ=255)
                                                                                aggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCACACCCCGACCCAC‑ACCCACAGGGAGAGGGAGAAAACACTCAAGGCCATCTCCGGGAGAAGGCCGTTCTATTAGtt                                                              >  1:1051734/1‑150 (MQ=38)
                                                                                aggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTAGTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCTCACCCCGACCCGC‑AACCCCCCGGCGAGGGATTAAACACCCATGGGCAGAGCAGGGAGAAGGCCTGGCTGTTAGtt                                                              >  1:422591/1‑150 (MQ=255)
                                                                                 ggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTg                                                             <  2:661703/150‑1 (MQ=255)
                                                                                   taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGCACCCCCACCCAC‑TCCCCCCGGGAGTGGGCGAACACACAAAAGGCCTTCACCTGGAGAAGGCCATGCTAATAGTTGCg                                                           >  2:4157237/1‑150 (MQ=255)
                                                                                    aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCGTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg                                                          <  1:2389051/150‑1 (MQ=255)
                                                                                        aaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa                                                      <  1:3918054/150‑1 (MQ=255)
                                                                                           tGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCa                                                   <  2:918250/150‑1 (MQ=255)
                                                                                                ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCACACCCCGACCCAC‑ACCCACCCGGGGGGGGGGCAAAAAAGCAATGCCGTCTCCGGGGGTAGGCCTTGCGATTAGTTGCGGGACAGCACCTTa                                              >  1:3488301/1‑150 (MQ=255)
                                                                                                 gCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTAACCCCGACCCGA‑TCCCCCAGGGCGAGGGCGACAACACACAAGGCCCTCTCCAGGAGGAGGCCGTGCTATTAGTTGCGGTACAGCCCCTTaa                                             >  2:3462817/1‑150 (MQ=255)
                                                                                                  cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTA‑TCCCACAGGGAGAGGGAGAAAAAACACAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCATAat                                            >  2:682386/1‑150 (MQ=255)
                                                                                                  cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCCACCCAC‑GACCACAGGGAGATGGAGAAAACACACAATGCCATCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCATAat                                            >  2:322130/1‑150 (MQ=255)
                                                                                                     tatGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatgat                                         <  1:357771/150‑1 (MQ=255)
                                                                                                      atGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatgatg                                        <  1:586912/150‑1 (MQ=255)
                                                                                                       tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgt                                       <  2:1852170/150‑1 (MQ=255)
                                                                                                       tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgt                                       <  1:3067469/150‑1 (MQ=255)
                                                                                                       tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgt                                       <  1:4100056/150‑1 (MQ=255)
                                                                                                        gACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCACACCCCGACCCAC‑ACCCACAGGGAGAGGGAGAAAAAACCCAAGGCCGTAACCAGGAGAAAGCCGTGCTATTAGTTGCGGTACAGCCCCGTAATGAtgtg                                      >  1:932322/1‑150 (MQ=255)
                                                                                                         aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGGGTGGGAGTAAACACTCTATGCCTTCTGCTGGAGAATGCCTTGCTATTTTTTTCGGTACAGCACCTTAATGTTGTGa                                     >  2:1095630/1‑150 (MQ=37)
                                                                                                         aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCACAACCCGAACCAA‑AACCACAGGGAGAGGGAGAAAACACTCAAGGCCGTCACCAGGAGAAGGCCGTGCTAATAGTTGCGGTACAGCACCATAattatggtt                                     >  1:3247845/1‑147 (MQ=255)
                                                                                                                    aCGTATTGCGGTTGCGGGTTAAGTGCGCGCGGATGCCCTCACCCCGACCCTC‑TCCCACCGGGAGAGGGAGACCACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg                          <  2:1949384/150‑1 (MQ=255)
                                                                                                                     cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg                         <  1:1738530/150‑1 (MQ=255)
                                                                                                                     cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg                         <  1:3401599/150‑1 (MQ=255)
                                                                                                                     cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg                         <  1:1645531/150‑1 (MQ=255)
                                                                                                                      gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTggg                        <  2:2241062/150‑1 (MQ=255)
                                                                                                                       tATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt                       <  2:3100484/150‑1 (MQ=255)
                                                                                                                        aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCGCCCCAC‑TCCCACAGGGAGAGGGAGTAAACACTCAACTCCTTCTCCTGGAGAAGGCCGAGCTATTATTTGCGGTAAAGCACCTTAAAGAATTGAAAAACGAACAGGgtg                      >  2:3731973/1‑150 (MQ=255)
                                                                                                                        aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCGACCCAC‑ACCCACAGGGCGAGGGCGAAAACACACAAGGCCAACTCCTGGAGAAGGCCTTGCGAGTAGTTGCGGTAAAGCACCTTAATGATTTGATATACGAACTGGgtg                      >  1:4232733/1‑150 (MQ=255)
                                                                                                                          tGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg                    <  1:3217216/150‑1 (MQ=255)
                                                                                                                            cTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCAC‑TCCCACCGGGCGAGGGAGAAAACACACAAGGCCATCACCTGGCGAAGGCCTGTCTATTAGTTGCGGTACAGCCACTTAATGATGTGATATCCGAACAGGGTGTGCa                  >  2:2682383/1‑150 (MQ=37)
                                                                                                                               ttGCGGGTTAAGTGCGCGCTGATTCCCGCAACCCCACCCAC‑TCCCACCGGGGGAGGGGGAAAAAACACAAGGCCGTATCATGGGGAAGGCCGTGCGATTAGTTTAGGGGCCGCACCATAAAGATGTGTTTTACGAAAGGGGTGTgcggcg               >  2:1902827/1‑150 (MQ=255)
                                                                                                                                tGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg              <  1:3447824/150‑1 (MQ=255)
                                                                                                                                 gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACCCTCAAGGCCGTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg             <  1:45973/150‑1 (MQ=255)
                                                                                                                                  cGGGTTAAGTGCGCGCTGATGCCCACAACCCGACCCAC‑AACCACAGGGGGAGGGAGAAAAAAAAAAAGGCCGTCACCGGGCGGACGCCTTGCGATTAGTTGCGGGACAGCCCCATAATGATGTGATATCCCAACGGGGTGTGCAGCGGGc            >  2:2045459/1‑150 (MQ=255)
                                                                                                                                    ggTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGATGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATTTGATATCCGAACTGGGTGTGCAGCGGGCCg          <  1:1791348/150‑1 (MQ=255)
                                                                                                                                      ttAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt        <  2:2263513/150‑1 (MQ=255)
                                                                                                                                       tAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc       <  2:164479/150‑1 (MQ=255)
                                                                                                                                            gcgcgcTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTc  <  1:2745235/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                             
GCTATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTC‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTC  >  NC_000913/3959308‑3959597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑