| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,229,177 | A→C | 17.4% | intergenic (+112/+261) | yohP → / ← dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,229,177 | 0 | A | C | 17.4% | 257.9 / 5.9 | 148 | intergenic (+112/+261) | yohP/dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Reads supporting (aligned to +/- strand): ref base A (28/75); new base C (16/9); total (52/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.70e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 153 total aligned reads displayed.
ACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATG > NC_000913/2229029‑2229326 | tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑G‑AGGGggc > 1:1030792/1‑150 (MQ=255) ggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGggcg < 1:2606975/150‑1 (MQ=255) gtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGggcgg < 2:147120/150‑1 (MQ=255) tgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑G‑AGGGgggggc > 2:1571500/1‑150 (MQ=255) gACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGcc < 2:3100198/150‑1 (MQ=255) gACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGcc < 2:879044/150‑1 (MQ=255) aCTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCa < 1:1503176/150‑1 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCACGGAGCGCG‑C‑CCGGGGCGGcccac > 1:3532158/1‑147 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑g‑ggggggggggcgag > 1:3308449/1‑145 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑CGGGGGCGGcccaa > 2:2995193/1‑147 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCCAt > 1:941069/1‑150 (MQ=255) gTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATcgcc < 1:1653182/150‑1 (MQ=255) tttAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCACGGAGCGCG‑C‑GGGGGGCGGCCCCAcgccgcc > 1:3540306/1‑150 (MQ=255) tttAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCC‑CGGGGGGGGCCAACcgcgcc > 2:4172775/1‑147 (MQ=255) tAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATcgccgccgc < 1:4103283/150‑1 (MQ=255) tAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATcgccgccgc < 1:3941637/150‑1 (MQ=255) aGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑CGGGGGGGGCCAAAAGCcccccccc > 2:2416831/1‑150 (MQ=255) aGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCCATAGCCCCCGccc > 2:2417561/1‑150 (MQ=255) aGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGccc < 2:1296906/150‑1 (MQ=255) tgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑G‑GGGGGGGGGGCCAAAGCccccccccccc > 2:4076834/1‑149 (MQ=255) tgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑G‑ACGGGGGGGGCAATAGCCGccccccccc > 1:3851388/1‑149 (MQ=255) atTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑ACGGGGCGGCCAAAAGCCGcccccccccccac > 2:568811/1‑145 (MQ=38) ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CGGGGGGGGGGCCAAACccccccccccccccccc > 2:865035/1‑145 (MQ=255) ttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑CAGGGGCGGCCCATAGCCGCCCCCCCCCGcccccc > 2:2580036/1‑150 (MQ=38) aattaattAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCggg < 2:1945919/150‑1 (MQ=255) aattaattAATGTCATCAGGTCCGAAAATAACGAGAATATTTAAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGATTCATATAATCACTGGAGCAAGGAGCGCG‑C‑CTGGAGAGGGCAATGGCCGCCCACCCCCGCACACCCcgg > 1:2571271/1‑150 (MQ=255) ttaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑G‑AGGGGGGCGCCAAACGCCCCCCCCCCCAGCAACCCCCGGCACTgg > 1:2447014/1‑150 (MQ=255) atGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGa < 2:1029045/150‑1 (MQ=255) atcaGGACCTAAAATAACGATAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGATTAATATAATCACTGGCGAATGGAGCGCG‑C‑CGGGGGCGGCCAACCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑aaa < 1:2389808/150‑1 (MQ=25) tcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑G‑GGGGGGGGGGCAAAACCCCCCGCCCCCACCACCCCCCCGCGCTGG‑CGGAC‑aaaa > 1:2168875/1‑150 (MQ=25) tcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑CGGGGGGGGCCCAAAGCCCCCCCCCCCCGCCCCCCCCCGCGCGGG‑CGCAC‑aaaa > 2:4178616/1‑150 (MQ=25) tcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑CGGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGG‑CGAAC‑aaaa > 2:2840801/1‑150 (MQ=255) aGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑CCGGGGCGGGCCCACCCCCCCCCCCCCCCCCCCCCCCGCCCCGGG‑CGAaa‑aaaaaa > 2:564815/1‑148 (MQ=255) aGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCCGGCTCTGG‑CGAAC‑AAAATc > 2:2877097/1‑150 (MQ=255) aGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTGCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAAACGCCGCCGCCCCCGGCCCCCCCCGGCGCGGG‑CGCAC‑AAAATc > 2:2479207/1‑150 (MQ=25) gTCCGAAAATACCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATcgc < 2:1238936/150‑1 (MQ=255) tCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATcgcc < 2:3922399/150‑1 (MQ=255) ccGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCAGG‑CGAAC‑AAAATcgccg > 2:2915174/1‑150 (MQ=255) ccGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑ACGGGGCGGCCAAAACCCCCCCCCCCCAGCCCCCCCCCGCGCAGG‑CGCAC‑acaaaacccc > 2:4214856/1‑144 (MQ=25) aTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTgcgc < 2:2253379/150‑1 (MQ=255) aTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTgcgc < 2:2253353/150‑1 (MQ=255) aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑G‑GGGGGGGGGCCCCACAGCGCCGGCCCCCGCCCCCCCCCCGGCGGG‑GGGCCAAAAATCGCCGCTGCGCgg > 2:1858132/1‑150 (MQ=255) agaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGcc < 2:2299499/150‑1 (MQ=255) tcgctctTCCTGTTGCGCTCCTGTCATGGGAATTGCTACATATAACCCCTGGCGCACGGCGCGCG‑C‑GGGGGGCGGCCAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATcc < 1:1710032/147‑1 (MQ=14) tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCCATCCCCCCCCCCCCCACCACCCCCCGGCTCAGG‑CCAAC‑AAAAAACCCCCAGCGCGGTGCCCACCGCTTATacca > 2:3588962/1‑149 (MQ=18) tcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCCATACCCGCCCCCCCCACCAACCCCCGGCTCATG‑CGAAA‑AAAAAACCCCCAGCCCGGTGCCCACCGCAGATCCCATa > 2:2133803/1‑150 (MQ=12) tcACCCTGTGGCGCTCCTGACATGTGCTTTGCTTCATATAATCACTGGCGCACGGCGCGCG‑C‑CGGGGGCGCCCAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 1:1428158/150‑1 (MQ=17) ccATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑CGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 1:2555703/149‑1 (MQ=255) aTCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACg < 2:1344555/150‑1 (MQ=255) tgtgGCGCTCGTGTCTTGTGCTTTGCTTCATATAATCAGTGGCGCATGGTGCGCG‑C‑CGGGGGCGGCCAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑a < 1:934745/150‑1 (MQ=17) tGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCACGGAGCGCG‑C‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑a < 1:3147106/150‑1 (MQ=255) tGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑a < 2:2601029/150‑1 (MQ=255) tGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACGGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑a < 2:2954871/150‑1 (MQ=255) ggcTCCTGTCTTGTGCATTGCTTCATATAATCCCTGGCGCACGGTGCGGG‑C‑CGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCggg < 1:776710/149‑1 (MQ=17) cgcTCCTGTCTTGTGCTTTGCTTCATATAATCACTGGCGCATGGAGCGCG‑C‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCggg < 1:776623/150‑1 (MQ=255) cTCCTGTCTGGTGCTTTGCTTCATATAATCAGTGGCGCACGGAGCGCG‑C‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTc < 1:1853015/150‑1 (MQ=17) cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCATGGAGCGCG‑C‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTc < 1:3469719/150‑1 (MQ=255) tCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑CCGGGGCGGCCAAAAGCCGCCCCCCCCCGCACCCCCCGGCTCGGGCCGAAA‑AAAAAC‑CCCCAGCGCGGTGCCCACCGCGTATACCATACGGCTAACCgggcg > 2:1752358/1‑148 (MQ=12) tCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATAGCCGCCGCCCCCTGCACCCCCCGGCTCTGG‑CGAAC‑AAAAACGCCCCGGCGCGGTGCCCTCCGCGTATCCCATACGGCT‑ACCCGGTCg > 2:2912175/1‑150 (MQ=17) tCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATAGCCGCCGCCCCCAGCACCCCCGGGCTCTGG‑CGAAA‑AAAATAGCCGCAGCGCGGTGCCCACGGCTTATCCCATAAGGCT‑AACCGGTCg > 2:735810/1‑150 (MQ=17) ccTGTCTTGTGCTTTGCTTAATATAATCACTGGCGCACGGAGCGCG‑C‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCgg < 1:1906497/150‑1 (MQ=14) ccTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCTCCGCTGCGCGGTGCCCTCGGATTATCCCTTACGGCT‑ACCGGGTCgg < 2:2365088/150‑1 (MQ=255) ccTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCgg < 2:431194/150‑1 (MQ=255) cTGTCTTGTGCATTGCTTAATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCggg < 1:3033713/150‑1 (MQ=255) cTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCggg < 2:3258075/150‑1 (MQ=255) cTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCggg < 2:3532158/150‑1 (MQ=255) cTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCggg < 2:941069/150‑1 (MQ=255) cTGTCATGTGCATTGCTTCATATAATCACGGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCggg < 2:3428879/150‑1 (MQ=255) tCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCCATCGCCCCCGCCCCCAGCACCCCCCGGCGCTGG‑CCAAC‑AAAATCCCCGCAGCCCGGGGCCCACGGCGTATACCTTACCGCT‑ACCCGGTCGGgcgc > 2:1041871/1‑150 (MQ=17) tCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCCAAAGCCCCCCCCCCCAGCACCCCCCGGCGCTGG‑CGGAC‑AAAAACGCCCCGGCGCGGTGGCCACCGCTTATCCCGTAAGGCG‑AACCGGTCGGgcgc > 2:357048/1‑150 (MQ=12) cATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGcgcg < 1:345378/150‑1 (MQ=255) aTGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGa < 2:3055392/150‑1 (MQ=255) tgtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAg < 1:2417561/150‑1 (MQ=255) tgtgCATTGCTTCATATAATCACGGGCGCAAGGAGCGCG‑C‑CGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAg < 1:4178616/150‑1 (MQ=255) ttGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCATTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACa < 2:4434/150‑1 (MQ=255) gCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATc < 2:2830478/150‑1 (MQ=255) ttCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATccc < 2:3443525/150‑1 (MQ=40) tCATATACTCCCTGGCGCACGGAGCGGG‑C‑CGGGGGCGGCCAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCt < 1:4201573/150‑1 (MQ=11) atatAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGt < 2:3366036/150‑1 (MQ=38) atatAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGt < 2:3366098/150‑1 (MQ=38) aaTCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTaaaa < 1:3974748/150‑1 (MQ=34) cACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgc < 2:4207488/150‑1 (MQ=32) aCTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgcg < 2:3130511/150‑1 (MQ=32) cTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACgcgc < 2:3167296/150‑1 (MQ=32) cTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACgcgc < 2:2571913/150‑1 (MQ=32) cTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACgcgc < 1:3994032/150‑1 (MQ=32) gcAAGGAGCGCG‑C‑AGGGGGCGGCCAATCCCCCCCCCCCCCAGCACCCCCCGGCTCTGG‑CGAAC‑AAAATAGCCGCGGCGCGGTGCCCTCGGCGTATCCCATACCGCT‑AACCGGTCGGGCGCGAGGTAACAACCCAGTAAAACCCGCCCGCa > 2:3960275/1‑150 (MQ=11) cAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAg < 1:2627440/150‑1 (MQ=32) cAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAg < 2:3499643/150‑1 (MQ=32) aGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc < 2:1455886/150‑1 (MQ=32) aGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc < 1:4214856/150‑1 (MQ=32) gAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCca < 1:1201089/150‑1 (MQ=32) cgcg‑c‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcacac < 1:480486/150‑2 (MQ=17) gcg‑c‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATc > 2:663986/1‑150 (MQ=32) gcg‑c‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATc > 2:1977749/1‑150 (MQ=32) gcg‑c‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATc > 2:2719489/1‑150 (MQ=32) cg‑c‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATcc < 1:3537400/150‑1 (MQ=32) aGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtg < 2:3989722/150‑1 (MQ=32) aGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtg < 1:3497083/150‑1 (MQ=32) aGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtg < 2:3989600/150‑1 (MQ=32) | ACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑C‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGG‑CGAAC‑AAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCT‑ACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATG > NC_000913/2229029‑2229326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |