New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 4532860 = | 140 (1.170) | 3 (0.030) | 3/268 | NT | 2.1% | coding (324/747 nt) | yjhP | putative methyltransferase |
? | NC_000913 | 4532900 = | 144 (1.240) | coding (284/747 nt) | yjhP | putative methyltransferase | |||||
Rejected: Frequency below/above cutoff threshold. |
ATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGGAAGAACTCGGCGTCAGCGAACGCGTACATTTTATTCATAACGATGCGGCCGGTTACGTCGCAAATGAAAAATGTGACGTGGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4533011‑4532860 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCC > NC_000913/4532900‑4533048 ATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGGAAGAACTCGGCGTCAGCGAACGCGTACATTTTATTCATAACGATGCGGCCGGTTACGTCGCAAATGAAAAATGTGACGTGGCGG < 1:1305096/150‑1 TGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGGAAGAACTCGGCGTCAGCGAACGCGTACATTTTATTCATAACGATGCGGCCGGTTACGTCGCAAATGAAAAATGTGACGTGGCGGC > 1:1725440/1‑150 GGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCACAGCGTCGCGCGGAAGAACTCGGCGTCCGCGACCGCGTACCTGTTCGTCAAAACGATCCGGCCGGTTACGGCGCAAATGAAACATGAGACGTGGCGGCC > 1:30176/1‑150 TGCGGCCGGTTACGTCGCAAATGAAAAATGTGACGTGGCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAAT > 1:960945/1‑150 CGGCCGGTTACGTCGCAAATGAAAAATGTGACGTGGCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGC > 2:1392298/1‑150 GGCCGGTTACGTCGCAAATGAAAAATGTGACGTGGCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCC > 1:868230/1‑150 GGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGc > 2:1138254/1‑149 GGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTACGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCAAGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGg > 2:377186/1‑149 GCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAG > 2:457654/1‑150 CCGCATCGTTATGAATAAAATGTACGCGTTCGCTGCCGCCGAGTGCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGAGGCCAGGCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCAGCTCGCCCGAGC < 1:475073/150‑1 CGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCC < 1:1615658/150‑1 CGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCC > 1:1986848/1‑150 CGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCC > 2:735785/1‑150 ATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGGAAGAACTCGGCGTCAGCGAACGCGTACATTTTATTCATAACGATGCGGCCGGTTACGTCGCAAATGAAAAATGTGACGTGGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4533011‑4532860 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCGCGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCC > NC_000913/4532900‑4533048 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |