New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 78144667 (0.560)5 (0.040) 5/278 NT 5.2% intergenic (+2/‑131) lysZ/lysQ tRNA‑Lys/tRNA‑Lys
?NC_000913 = 2521361 116 (0.970)intergenic (+33/+232) lysV/xapR tRNA‑Lys/transcriptional activator of xapAB

Only 100 of 131 total aligned reads displayed.

GAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGC  >  NC_000913/2521212‑2521509
                                                                                                                                                     |                                                                                                                                                    
gaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTAc                                                                                                                                                      <  1:893614/150‑1 (MQ=255)
  gggggTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTa                                                                                                                                                    <  1:1755604/150‑1 (MQ=255)
  gggggTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGAGCTTTTATACTa                                                                                                                                                    >  2:1055264/1‑150 (MQ=255)
       gcggcggTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTGGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTACAGGCGCTTTTTTACTATCTGc                                                                                                                                               <  1:1786348/149‑1 (MQ=255)
         ggcggTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCCAGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGa                                                                                                                                             >  1:522052/1‑150 (MQ=255)
         ggcggTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGa                                                                                                                                             <  1:1901106/150‑1 (MQ=255)
          gcggTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGAt                                                                                                                                            <  2:1600499/150‑1 (MQ=255)
                 gATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCaaa                                                                                                                                     <  1:1038723/150‑1 (MQ=255)
                 gATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCaaa                                                                                                                                     >  2:1667308/1‑150 (MQ=255)
                 gATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCAGCGAAAATCaaa                                                                                                                                     >  2:187209/1‑150 (MQ=255)
                      cGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTc                                                                                                                                <  1:664579/150‑1 (MQ=255)
                       gTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGTGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCg                                                                                                                               <  2:1260603/150‑1 (MQ=255)
                       gTCAACACCCACGACTTCGGGTCGTTAGCTAAGTTGGTAGAGAAGTTGAATTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCg                                                                                                                               <  2:198661/150‑1 (MQ=14)
                        tcatcaCCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGa                                                                                                                              <  1:1333589/150‑1 (MQ=255)
                              cccaccACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgc                                                                                                                        >  1:1603383/1‑150 (MQ=40)
                              cccaccACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgc                                                                                                                        <  1:1547471/150‑1 (MQ=40)
                              cccaccACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCAAACCTgc                                                                                                                        >  2:511869/1‑150 (MQ=255)
                                caccacTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTAGACTTTTAATCAATTGGTCGCAGGTTCTAATCCTGAACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTATACTAACTGCGATACTCAAACAATAGAACCGgcag                                                                                                                      >  2:1466490/1‑150 (MQ=14)
                                    acTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAgg                                                                                                                  <  1:1813698/150‑1 (MQ=35)
                                          ggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgag                                                                                                            >  1:565632/1‑150 (MQ=32)
                                             cGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAACCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttg                                                                                                         >  2:463569/1‑150 (MQ=17)
                                              gTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga                                                                                                        >  2:8224/1‑150 (MQ=32)
                                              gTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga                                                                                                        <  2:1572118/150‑1 (MQ=32)
                                                tAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgc                                                                                                      <  2:1731840/150‑1 (MQ=32)
                                                  tcTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGATTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgcgc                                                                                                    >  1:1549692/2‑150 (MQ=17)
                                                  gCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgcgc                                                                                                    >  1:1756496/1‑150 (MQ=32)
                                                  gCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgcgc                                                                                                    >  1:1087119/1‑150 (MQ=32)
                                                   cTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgcgcc                                                                                                   >  1:1273869/1‑149 (MQ=17)
                                                   cTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa                                                                                                   >  1:1724078/1‑150 (MQ=32)
                                                    tCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAg                                                                                                  <  1:785357/150‑1 (MQ=32)
                                                     cAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGAAGCAGGTTTGAGTTGAGCGCAGc                                                                                                 >  1:1190137/1‑150 (MQ=17)
                                                              gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACg                                                                                        >  1:2041717/1‑150 (MQ=32)
                                                              gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACAATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGATCCCAGAGAAACAACg                                                                                        >  1:993351/1‑150 (MQ=255)
                                                               agCAGGTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAACGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACgg                                                                                       <  1:1257013/150‑1 (MQ=17)
                                                                 cAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAg                                                                                     >  1:1223084/1‑150 (MQ=32)
                                                                 cAGTTGACTTTTAATCAATTGGGCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCACAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAg                                                                                     <  1:100619/150‑1 (MQ=17)
                                                                   gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAAAGCGCACTAAAGGCGCTATTTAACTATATCGTATCCTAAAAGAATCCACCCAGCACCAGGGGTGAGATAAGCGAACGGAAACAACCGAGca                                                                                   >  2:798944/1‑149 (MQ=2)
                                                                   gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCTCTTTTTTACTATCTGCGCTACTCAAAAATTCGATCCTGCAGCAGGTTTGAGTTTAGCGCAGCGAAACAACGCAGcc                                                                                   >  1:417368/1‑150 (MQ=11)
                                                                   gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGcc                                                                                   >  1:698949/1‑150 (MQ=32)
                                                                   gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGcc                                                                                   >  2:187109/1‑150 (MQ=32)
                                                                     tGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAACGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGc                                                                                 <  1:325264/150‑1 (MQ=17)
                                                                     tGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGcgccgc                                                                                 >  1:553681/1‑150 (MQ=17)
                                                                      gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt                                                                                >  2:584909/1‑150 (MQ=32)
                                                                        cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCGGCAGAAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcg                                                                              >  1:1503529/1‑150 (MQ=17)
                                                                        cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCAACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGGTTGAGTTGAGCCCAGCGAAACACCGGAGCCGCTcg                                                                              >  1:982779/1‑150 (MQ=255)
                                                                             aaTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACattggtgggtcgtgcaggattcgaacctgcgaccaattgattaaaagacaactgctctaccaactgagctaacgacc                                                                         <  2:1204385‑M2/150‑78 (MQ=255)
                                                                              aTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGGTTTTTTACTATCTGCGATACTCAAAGATTCGACCCTGCAGCAGGTTTGAGTTGAGAGCAGCGAAACAACGGAGCCGCTCGCGGCGa                                                                        >  2:405961/1‑150 (MQ=12)
                                                                              aTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTCCAGCAAGTTTGAGTTGATCGAATCGCAACAACGGAGCCGCTCgcggcgc                                                                        >  2:106715/1‑149 (MQ=11)
                                                                                 aaTTGGTCGCAGGTTCTAATCCTGCACTACCCACCAATGAAAAAAAGCGCCCTAACGGCGCTTTTTTACTATCTGCGATACTCAAATATTCGAACCTGCAGCTGGTTTGAGTGGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACgg                                                                     <  2:1541947/150‑1 (MQ=11)
                                                                                      gTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa                                                                >  2:1197285/1‑150 (MQ=32)
                                                                                      gTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATAATCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGCGCCGCTCGCGGCGACGGCCCGa                                                                >  1:185578/1‑150 (MQ=17)
                                                                                      ctCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa                                                                >  1:1361326/2‑150 (MQ=17)
                                                                                        cGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAACGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAg                                                              <  1:173155/150‑1 (MQ=17)
                                                                                        cGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTAATATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAg                                                              <  2:726829/150‑1 (MQ=17)
                                                                                          cAGGTTCGAATCCTGCACGACCCACCAATGTAAAAACGCGCCCTAACGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAggg                                                            <  1:762742/150‑1 (MQ=17)
                                                                                          cAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAggg                                                            >  2:527123/1‑150 (MQ=32)
                                                                                          cAGGTTCGAATCCAGCACGACCCACCAATGTAAAACAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAACGATTCGACCCGGCAGCAGGTGTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAggg                                                            <  1:1434349/150‑1 (MQ=11)
                                                                                           cggTGCGAAACCTGCACGACCCACCAATGTAAAAAAGCGCCCTACAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGACCCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgc                                                           <  1:281082/149‑1 (MQ=255)
                                                                                              ttCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAGACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgcgcg                                                        >  1:1396138/1‑148 (MQ=17)
                                                                                                 gAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGCGCCGCTCGCGGCGACGGCCCGAAGGgcgagcga                                                     >  2:552455/1‑150 (MQ=17)
                                                                                                  aaaccTCCACGACCCACCAATGAAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAATTATTCGAACCTGCAGCAGGTTTGAGTGGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaa                                                    <  2:208140/147‑1 (MQ=11)
                                                                                                   aTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGATCGCATCGAAACAACGGAGCAGCTCGCGGCGACGGCCCGAAGGGCGagcgaag                                                   >  2:1502384/1‑150 (MQ=12)
                                                                                                    tCCTGCACGACCCACCGATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGAAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagc                                                  >  2:1953704/1‑150 (MQ=17)
                                                                                                       tGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAg                                               <  2:182813/150‑1 (MQ=32)
                                                                                                             aCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATcc                                         >  2:1185208/1‑150 (MQ=32)
                                                                                                              cccACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCCGCAGGGTTGAGTTGAGCGCATCGAAACAACTGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGAGAAGCGAGTCATCCt                                        >  2:1068910/1‑150 (MQ=11)
                                                                                                                 accaATGAACACACGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCa                                     <  2:1277004/150‑1 (MQ=255)
                                                                                                                  ccaATGTAAAAAAGCGCCCTAACGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCAc                                    <  1:1458890/150‑1 (MQ=17)
                                                                                                                     tagTAAAAAAGCGCCTTTAGGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGATCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACgcc                                 >  2:1978581/3‑148 (MQ=11)
                                                                                                                     aTGAAAAAAAGCGCCCAAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATGCGAACCTGCAGCAGGTTTGAGTTCAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGAc                                 <  1:592065/150‑1 (MQ=255)
                                                                                                                      tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGAcc                                <  2:1324015/150‑1 (MQ=32)
                                                                                                                      agcaaaatagcgCCTTTAGGGCGCTTTTTTACattggtgggtcgtgcaggattcgaacctgcgaccaattgattaaaagtcaactgctctaccaactgagctaacgacccatacgggtgttacctgaaagatttttactcggggccaatc                                >  1:707502‑M2/4‑32 (MQ=255)
                                                                                                                        tAAAAACGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACcca                              <  2:175290/150‑1 (MQ=17)
                                                                                                                        tAAAAAAGCGCCTTTAGGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGACGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGAAcca                              >  2:1228370/1‑150 (MQ=11)
                                                                                                                        tAAAAAAGCGCCTTTAGGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGGTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACcca                              >  1:1945614/1‑150 (MQ=255)
                                                                                                                        tAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTGGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACcca                              >  1:1175023/1‑150 (MQ=17)
                                                                                                                        tAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACcca                              >  2:1732460/1‑150 (MQ=32)
                                                                                                                         aaaaaaGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACccac                             >  2:206183/1‑150 (MQ=32)
                                                                                                                         aaaaaaGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACATGCAGCAGGTTTGAGTTGAGCGAAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGCGCGATGCGAGTCATCCTGCACGACcaac                             >  1:8319/1‑150 (MQ=11)
                                                                                                                         aaaaaaGCGCCCTAAAGGCGCTTTTTTACTATATGCGATACTCAAAGATTCGAACCTGCAGCAGGGTTGATTTGAGCGCAGCGAACCAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCATGCACGACccac                             >  1:406367/1‑150 (MQ=11)
                                                                                                                          aaaaaGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGACATCCTGCACGACccacc                            >  2:570169/1‑150 (MQ=17)
                                                                                                                                  cccTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaa                    >  1:1502920/1‑150 (MQ=32)
                                                                                                                                     tAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaaaaa                 <  2:1361325/150‑1 (MQ=32)
                                                                                                                                      aaaGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCTAAAAAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAg                <  1:427615/150‑1 (MQ=17)
                                                                                                                                       agtgcgctttTTTACattggtgggtcgtgcaggattcgaacctgcgaccaattgattaaaagtcaactgctctaccaactgagctaacgacccatacgggtgttacctgaaagatttttactcggggccaatctttaagattggtgggtc               >  2:306529‑M2/4‑15 (MQ=255)
                                                                                                                                         ggCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAgcgc             >  2:422511/1‑150 (MQ=32)
                                                                                                                                          gcgcTTTTTTACTATCTGCGATACTCAAAGATGCGACCCTGCAGCCGGTTTGAGTTGCGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGcc            >  1:1335409/1‑150 (MQ=255)
                                                                                                                                           ggcTTTTTTACTATCTGCGATAGTAAATGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCAGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGccc           <  2:220079/149‑1 (MQ=255)
                                                                                                                                           cgcTTTTTTACattggtgggtcgtgcaggattcgaacctgcgaccaattgattaaaagtcaactgctctaccaactgagctaacgacccatacgggtgtta                                                            <  2:1261508‑M2/101‑91 (MQ=255)
                                                                                                                                           cgcTTTTTTACattggtgggtcgtgcaggattcgaacctgcgaccaattgattaaaagtcaactgctctaccaactgagctaacgacccatacgggtgtta                                                            >  1:1261509‑M2/1‑11 (MQ=255)
                                                                                                                                            gcTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCt          <  2:732091/150‑1 (MQ=32)
                                                                                                                                             cTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTa         >  2:92268/1‑150 (MQ=32)
                                                                                                                                              aagtttacattggtgggtcgtgcaggattcgaacctgcgaccaattgattaaaagtcaactgctctaccaactgagctaacgacccatacgggtgttacctgaaagatttttactcggggccaatctttaagattggtgggtcgtgcagg        >  1:1292405‑M2/4‑8 (MQ=255)
                                                                                                                                                ttttACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAg      >  2:764118/1‑150 (MQ=32)
                                                                                                                                                ttttAATATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAg      <  2:1603382/150‑1 (MQ=17)
                                                                                                                                                 tttACTATCTGAGTTACTCAAAGATTAGTAGCTGCTGCAGGTTTGAGATGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg     <  1:1055265/150‑1 (MQ=11)
                                                                                                                                                 tttAATATCTGCTATAATCAAAGTTTCGAACCTGCTGCTGGTTTTAGTTTAGCGCAGCTAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg     <  1:1667309/150‑1 (MQ=11)
                                                                                                                                                  ttACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGTACGCCCCACCAATGTAAAAAAGCGCCATAAAGgc    >  2:616983/1‑150 (MQ=12)
                                                                                                                                                   tACTATCTGCTATACTCAAAGATTCTAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcg   <  2:1756495/150‑1 (MQ=14)
                                                                                                                                                    aCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGTCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcgc  >  1:142995/1‑150 (MQ=11)
                                                                                                                                                     |                                                                                                                                                    
GAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGC  >  NC_000913/2521212‑2521509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.