| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,966,374 | C→T | 5.1% | intergenic (‑183/+19) | flhB ← / ← cheZ | flagellin export apparatus, substrate specificity protein/chemotaxis regulator, protein phosphatase for CheY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,966,374 | 0 | C | T | 5.1% | 387.1 / 5.4 | 118 | intergenic (‑183/+19) | flhB/cheZ | flagellin export apparatus, substrate specificity protein/chemotaxis regulator, protein phosphatase for CheY |
| Reads supporting (aligned to +/- strand): ref base C (60/52); new base T (3/3); total (63/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TGATGCCAGAGCGCAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGACTCCTGTTCCG > NC_000913/1966225‑1966523 | tgatgCCAGAGCGCAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGc > 1:549379/1‑150 (MQ=255) gatgCCAGAGCGCAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGcc > 1:1161169/1‑150 (MQ=255) gCCAGAGCGCAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCcaca < 2:1934556/150‑1 (MQ=255) gCCAGAGCGCAAAGCGTGCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCcaca < 2:1440034/150‑1 (MQ=255) ccAGAGCGCAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCcacaa > 2:1612959/1‑149 (MQ=255) agagCGCAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCa > 1:1415608/1‑150 (MQ=255) gagCGCAAAGCGTTCCATCGTTTGAGTAAGGGGCAAACCAGGCGGGATTTAGGGCTTTTGCGGCGACACCTCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTCTCAGACCGCCTGATATGACGTGGTCACGCCACATCAg < 1:198316/150‑1 (MQ=255) gcgcAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGc < 1:935969/150‑1 (MQ=255) cacAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATGTGGCGTGACCACGTCATATCAGGcg < 2:808912/148‑2 (MQ=255) agcAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTATGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGAGGCGACATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCa > 1:390839/2‑150 (MQ=255) cAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAAt > 1:192518/1‑150 (MQ=255) aaaGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATa < 1:710994/150‑1 (MQ=255) aaaGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGGCATCGCCTTATCAGACCGCCGGATGTGGCGTGACCACGTCATATCAGGcggtc < 2:1543613/150‑5 (MQ=255) aaGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATaa > 1:1954093/1‑149 (MQ=255) aaGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATAc > 1:27878/1‑150 (MQ=255) aGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACa > 1:215649/1‑150 (MQ=255) gTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAAt < 1:1757855/150‑1 (MQ=255) ttCAATGGTTTGAGTAAGTTTATTTACATGAGGGATTTAGGGCTTTTGGTGCCACACATCAAGCTTAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCATAACGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATc < 2:75532/150‑1 (MQ=255) ggTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATc > 2:349653/1‑150 (MQ=255) tGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAg < 1:1198001/150‑1 (MQ=255) tGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAg < 1:149539/150‑1 (MQ=255) tGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAg < 2:1003464/150‑1 (MQ=255) aaGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTAt > 1:606990/1‑150 (MQ=255) gggCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCca > 1:1529980/1‑150 (MQ=255) cAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCTTCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCGACATCAGTCAATACAAAACAAAATCCACGACTATCaaaca > 2:1817417/1‑150 (MQ=255) cAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCcaaca < 1:616796/150‑1 (MQ=255) cAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCcaaca < 1:767017/150‑1 (MQ=255) aCAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATc < 1:1389315/150‑1 (MQ=255) cAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCg < 2:1870753/150‑1 (MQ=255) aGGCGGGAGTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGt < 2:258942/150‑1 (MQ=255) ggCGGGATATAGGGCTTTTGCTGCCAGACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCGTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTc < 2:100402/150‑1 (MQ=255) gCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTcc < 1:1931495/150‑1 (MQ=255) gCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTcc > 2:26084/1‑150 (MQ=255) gATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCt < 2:2007772/150‑1 (MQ=255) tttAGGGCTTTTGCTGCCACACCTCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCCTCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCCAGCCTATCCATCAAATCGTCCACGTGa > 2:1396177/1‑150 (MQ=255) aGGGCTTTTGCTGCCACACATCAAGCTTAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATcc < 1:727457/150‑1 (MQ=255) aGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATcc < 2:1981058/150‑1 (MQ=255) aGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATcc < 2:1378269/150‑1 (MQ=255) ggCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACACATCGTCCACCTGATCCTg > 1:552213/1‑150 (MQ=255) tgctgcCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACATGATCCTGACTGGc > 2:1914151/1‑150 (MQ=255) tgcCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTAc < 2:1683140/150‑1 (MQ=255) tgcCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTAc > 2:713247/1‑150 (MQ=255) gcCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTAcc > 1:2017183/1‑150 (MQ=255) ccACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACca > 2:1160089/1‑150 (MQ=255) cacacaTCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACcac < 2:157099/150‑1 (MQ=255) aTCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCCCACCgg > 2:60139/1‑150 (MQ=255) tCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGc < 2:806882/150‑1 (MQ=255) tCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGc > 1:1622455/1‑150 (MQ=255) aGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCttt > 1:1135229/1‑150 (MQ=255) gCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTg < 2:549379/150‑1 (MQ=255) gggtgCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGAGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGt < 1:1244200/148‑1 (MQ=255) tgCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACAACACCGGCTTTGCTGGTAta > 2:1301953/1‑149 (MQ=255) gCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCg > 1:1607122/1‑150 (MQ=255) gCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCg < 1:1073826/150‑1 (MQ=255) gCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCg > 1:10728/1‑150 (MQ=255) cGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCTCCTGATATGAAGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGa > 2:1432444/1‑150 (MQ=255) gTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATACTGACTGGCTACCACACCGGCTTTGCGGGTATCGAc > 1:1055971/1‑150 (MQ=255) tttGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCCCACCGGCTTTGCTGGTATCGAcc > 2:141825/1‑150 (MQ=255) tttGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGAcc < 1:970228/150‑1 (MQ=255) tttGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGAcc < 1:1581017/150‑1 (MQ=255) tCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAg < 2:27878/150‑1 (MQ=255) ggATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGGCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGt < 2:1455941/150‑1 (MQ=255) gcggcgTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCAt < 1:1913114/150‑1 (MQ=255) cggcgTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCAtt > 2:217934/1‑150 (MQ=255) cggcgTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCAtt > 2:38486/1‑150 (MQ=255) cggcgTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCAACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCAtt > 2:301705/1‑150 (MQ=255) cggcgTCATCGCCGTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAACTCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCAtt < 2:588786/150‑1 (MQ=255) ggcgTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTa > 1:485781/1‑150 (MQ=255) ggcgTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCAAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTa > 1:593890/1‑150 (MQ=255) cgTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAg > 1:731799/1‑150 (MQ=255) cATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGACCATTAAGCaa > 1:258323/1‑150 (MQ=255) aTCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCAAACAAATCGTCCACCTGATCATGACTGGCTACAACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCaaa > 1:1022931/1‑150 (MQ=255) ccTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAActct > 1:688241/1‑150 (MQ=255) ttATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTgg < 1:242530/150‑1 (MQ=255) tATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGt < 2:342954/150‑1 (MQ=255) cAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGtttt < 1:372464/150‑1 (MQ=255) gACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGAATATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCa > 2:1462697/1‑150 (MQ=255) attgCCTGATGTGGCGTGACCACGTCATATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATGCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTCAGTTCCATTAAGAAAACTCTGGTATTCAc > 1:306276/4‑150 (MQ=255) ccTGATATGACGTGGTCACGCCACATCAGGCAATACTATTCAAAATCGTAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCAGTCCGGCTTTGCTGTTATCGACCTGAGGTCCATTAAGCAATCTCTGGTTTTCACGttt < 1:97559/150‑1 (MQ=255) ccTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGttt > 1:172104/1‑150 (MQ=255) gATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTgg < 1:220211/150‑1 (MQ=255) gATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTgg > 2:388005/1‑150 (MQ=255) atGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGAcg < 1:349653/150‑1 (MQ=255) tGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGAcgc > 1:1870695/1‑150 (MQ=255) gACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCTTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGAcgcg < 1:1009628/150‑1 (MQ=255) gACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGAcgcg > 2:1378943/1‑150 (MQ=255) gACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGAcgcg < 1:149548/150‑1 (MQ=255) gACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACAACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCATACTCTGGTTTTCACGTTTTGGAcgcg > 1:1726695/1‑150 (MQ=255) gACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATACATCAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGAcgcg < 1:1435105/150‑1 (MQ=255) gACGAGGTCACGCCACATCAGGCAATACAAATCAAAATCCCAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCCACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGAcgcg < 1:143441/150‑1 (MQ=255) aCGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGGTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGa > 2:1239496/1‑150 (MQ=255) cGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGAc > 2:1790/1‑150 (MQ=255) cGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGAc < 2:10728/150‑1 (MQ=255) gtgaccACGTCATATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGACt > 1:11930/6‑150 (MQ=255) tgaccACGTCATATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGACTc > 2:1940998/5‑150 (MQ=255) gTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGCTCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGcctcct > 1:31335/1‑150 (MQ=255) cACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGACTCCTGt > 2:548165/1‑150 (MQ=255) cGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGCCTCCTGTTc > 1:882470/1‑150 (MQ=255) cGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGACTCCTGTTc < 2:1529979/150‑1 (MQ=255) ccACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGACTCCTGTTCCg < 2:598075/150‑1 (MQ=255) | TGATGCCAGAGCGCAAAGCGTTCAATGGTTTGAGTAAGGGGCAAAACAGGCGGGATTTAGGGCTTTTGCTGCCACACATCAAGCATAGTGTGCGTTTGTCGGATGCGGCGTCATCGCCTTATCAGACCGCCTGATATGACGTGGTCACGCCACATCAGGCAATACAAATCAAAATCCAAGACTATCCAACAAATCGTCCACCTGATCCTGACTGGCTACCACACCGGCTTTGCTGGTATCGACCTGAGGTCCATTAAGCAAACTCTGGTTTTCACGTTTTGGACGCGACTCCTGTTCCG > NC_000913/1966225‑1966523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |