| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4213168 = | 157 (1.320) | 11 (0.100) | 8/276 | 9.7 | 6.9% | intergenic (+9/‑66) | rrfE/yjaA | 5S ribosomal RNA of rrnE operon/stress‑induced protein |
| ? | NC_000913 | 4213199 = | 153 (1.390) | intergenic (+40/‑35) | rrfE/yjaA | 5S ribosomal RNA of rrnE operon/stress‑induced protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TACTGAAGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4213327‑4213168‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggggtttttTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATCGC > NC_000913/4213199‑4213346 TACTGAAGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATAGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGTCCTTATGGAC > 2:752848/1‑150 CTGAAGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCG > 1:1166861/1‑150 CTGAAGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCG > 1:37416/1‑150 GAAGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGG > 1:1115647/1‑150 GAAGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACACCGGCCTTATGGACCGGG > 2:866279/1‑150 AGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGT < 1:848779/150‑1 AGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAATAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGT < 1:737373/150‑1 AGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAATAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGT < 1:744081/150‑1 AGGCAGCGTCTACTGACACATCACGTTTCCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCATTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGT > 2:55806/1‑150 AGGCAGCGGCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGAGTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGT > 2:65433/1‑150 GGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAATTAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTT > 2:100449/1‑150 GGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTT > 2:1815448/1‑150 GGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTT > 2:1315360/1‑150 GGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAACATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTT > 1:2029/1‑150 GCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAGATAATTGATATGCAAAAAACCCCGGCCTTAAGGACCGGGGTTT > 1:133727/1‑150 GCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTTT > 2:1566358/1‑150 CCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGT > 2:1541005/1‑125 CCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGT < 1:538774/125‑1 CCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGT < 1:1541005/125‑1 CCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGT > 2:538774/1‑125 ATGCAAAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAG > 2:718054/1‑150 TGCAAAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGA > 2:416351/1‑150 CAAAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACG > 2:454032/1‑150 AAAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGC > 2:1903048/1‑150 AAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCT > 2:445916/1‑150 AAAAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTATGTATATCCAAATTCGTCGTAATCAAAATACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCATGAGACGCT > 2:1739066/1‑150 AAACCCCGGCCTTATGGACCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGC > 1:576168/1‑150 CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGGGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCT > 1:1433274/1‑150 GGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGT > 1:1584819/1‑150 GGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTAGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGT > 1:269628/1‑150 GGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATATCATGTCAGTTATGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGT < 2:278266/150‑1 GGGGTTTTTTGCATAGCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGGGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGa < 1:1383423/150‑2 GGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTT < 2:476151/150‑1 TTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAAT < 2:1887828/150‑1 TTTTTGCATATCAATTATTTGCTTGATGAAGGGATTCTCATGTCAGTGCTGTATCTCCAAATTCGTCGTAATCAATTTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATC < 2:1697032/150‑1 TTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATC < 2:1669199/150‑1 TTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATC > 2:1194083/1‑150 TTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATC < 2:948987/150‑1 TTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATCGC > 2:942215/1‑150 TACTGAAGGCAGCGTCTCCTGACACTTCACGTTTGCTTTCAAGATCGCGAACAGTAATTTGATTACGACGAATTTGGATATACAGAACTGACATGAGATTCCCTTCATCATGCAAATAATTGATATGCAAAAAACCCCGGCCTTATGGACCGGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4213327‑4213168‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggggtttttTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATCGC > NC_000913/4213199‑4213346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |