New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)87 (0.750) 71/290 0.7 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

TTCTCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCG  >  NC_000913/1299351‑1299646
                                                                                                                                                   |                                                                                                                                                    
ttctCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAat                                                                                                                                                    <  2:1879059‑M1/150‑3 (MQ=255)
    cAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAATTGCTAAataata                                                                                                                                                >  1:1078918‑M1/1‑144 (MQ=255)
    cAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCATGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                                                                                <  1:1308076‑M1/150‑7 (MQ=255)
       aTTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATACTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatc                                                                                                                                             <  2:1576714‑M1/150‑10 (MQ=255)
           cAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaatt                                                                                                                                         <  2:1761129‑M1/150‑14 (MQ=255)
             tttagttatAAGTATTTACTTAACTGCTTCTCCTCACCATCTTGTTATTTTCGACACATCATAATCCTGGGCTTGCTGAAGAATAATTTAAATGATATTATTATTTCCTCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgt                                                                                                                                       <  1:209129‑M1/149‑16 (MQ=255)
             gttagttaTAAGGATTTCCTTCACTGCTTCTCCTCACCATCATGTTATTTTCGACACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGACTATGGTAGAGGAAAGTGCTAAataataatcaattgt                                                                                                                                       >  1:94243‑M1/1‑135 (MQ=255)
               tagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                                                                     <  1:1445708‑M1/150‑18 (MQ=255)
               tagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                                                                     >  1:1661122‑M1/1‑133 (MQ=255)
                   tataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCCCATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTATTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                                                                                 >  2:1164426‑M1/1‑129 (MQ=255)
                    ataAGGATTTCCTTAACTTCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatta                                                                                                                                <  2:675331‑M1/150‑23 (MQ=255)
                     taAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataataaattgttaaattat                                                                                                                               >  1:659804‑M1/1‑127 (MQ=255)
                       aGGCTTTCCTAAACTTCATCTCCTCCCCCACATCTTATATTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAAATGAAATGATATTATTAAATCCACTCCCTTTTGTAGAGGAAAGTGCTAAataataatcaattgttaaattattg                                                                                                                             <  2:1175921‑M1/150‑26 (MQ=255)
                         gATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                                                                           <  1:931902‑M1/150‑28 (MQ=255)
                          aTTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                                                                          >  1:561192‑M1/1‑122 (MQ=255)
                          aTTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCATGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGATAAataataatcaattgttaaattatagtga                                                                                                                          >  1:206380‑M1/1‑122 (MQ=255)
                              ccTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGAAGAGGAAAGTGATAAttaataatcatttgttaaattattgggatttt                                                                                                                      >  2:58036‑M1/1‑118 (MQ=255)
                               cTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattta                                                                                                                     >  1:773265‑M1/1‑117 (MQ=255)
                               cTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCGTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAttaataatcaattgttaaattattgtgcatttc                                                                                                                     >  2:92882‑M1/1‑117 (MQ=255)
                                       cTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                             >  1:235873‑M1/1‑109 (MQ=255)
                                       cTTCTCCTCACCATCATGTTATTTTCACCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                             >  2:1431909‑M1/1‑109 (MQ=255)
                                        ttCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgga                                                                                                            <  2:1845315‑M1/150‑43 (MQ=255)
                                          gtggtcacccTCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCTCTGCGTTTGTTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaac                                                                                                          <  2:485813‑M1/146‑45 (MQ=255)
                                          ctcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattttgcatttcactactggaac                                                                                                          >  2:87708‑M1/1‑106 (MQ=255)
                                          ctcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaac                                                                                                          <  1:1442030‑M1/150‑45 (MQ=255)
                                          ctcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaac                                                                                                          >  1:773036‑M1/1‑106 (MQ=255)
                                          ctcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaac                                                                                                          <  2:1831815‑M1/150‑45 (MQ=255)
                                          ctcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAATAATTCCACTGCCTTTGGTAGAGGAAAGTGCTTAataataatcaattgttaaattattgtgcatttcactactggaac                                                                                                          <  2:997982‑M1/150‑45 (MQ=255)
                                           tcatcaccATCATTTTATTTTCGCCACATCATAATCCTTGGCTTTCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                         <  1:1270914‑M1/147‑46 (MQ=255)
                                           tactcacCATCAAGTTATTTTCGCCACATCATAATCCTGCGCTTGCTGAAGAAAAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGTAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                         <  2:47754‑M1/148‑46 (MQ=255)
                                            cctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                                                                        <  1:1853927‑M1/150‑47 (MQ=255)
                                            cctaACCATAATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAATAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                                                                        <  1:906601‑M1/150‑47 (MQ=255)
                                            actcaCAATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                                                                        <  2:1179270‑M1/149‑47 (MQ=255)
                                              tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgta                                                                                                      <  1:1777265‑M1/150‑49 (MQ=255)
                                                 ccATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                                                                   <  2:737250‑M1/150‑52 (MQ=255)
                                                    tcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcaga                                                                                                >  1:645150‑M1/1‑96 (MQ=255)
                                                      atGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaa                                                                                              <  2:645150‑M1/150‑57 (MQ=255)
                                                        gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaag                                                                                            >  2:310483‑M1/1‑92 (MQ=255)
                                                           aTTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                         <  2:1400704‑M1/150‑62 (MQ=255)
                                                                cGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATGAATTCCACTGCCTTTGGTAGCGGAAAGTGCGAAataataatcaattgttaaattattgtgcatttcactacttggactgtaatcagaaaagatatacat                                                                                    >  1:1158478‑M1/1‑84 (MQ=255)
                                                                   cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgct                                                                                 >  1:496504‑M1/1‑81 (MQ=255)
                                                                     catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                                                                               >  2:244240‑M1/1‑79 (MQ=255)
                                                                      atgataatCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggatctgtaatcagaaaagatagacatgcttag                                                                              <  2:1838535‑M1/147‑73 (MQ=255)
                                                                       tcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                                                                             >  1:1044013‑M1/1‑77 (MQ=255)
                                                                        catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcc                                                                            <  2:1809742‑M1/150‑75 (MQ=255)
                                                                        catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcc                                                                            >  2:306968‑M1/1‑76 (MQ=255)
                                                                            aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                                                                        <  2:1710817‑M1/150‑79 (MQ=255)
                                                                            aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                                                                        >  1:1778760‑M1/1‑72 (MQ=255)
                                                                            aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                                                                        <  2:820699‑M1/150‑79 (MQ=255)
                                                                              ccTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctc                                                                      >  2:903238‑M1/1‑70 (MQ=255)
                                                                                  ggCTTGCTTAAGAATAATTGAAATGATATTAATAAATCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgaaatcagaaaagatagacatgcttagccaatctctatt                                                                  <  2:263079‑M1/150‑85 (MQ=255)
                                                                                        cTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattg                                                            <  2:1524605‑M1/150‑91 (MQ=255)
                                                                                         tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattga                                                           <  2:642972‑M1/150‑92 (MQ=255)
                                                                                           aagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat                                                         <  1:943066‑M1/150‑94 (MQ=255)
                                                                                            agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaatt                                                        <  1:1534265‑M1/150‑95 (MQ=255)
                                                                                             taataattGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattg                                                       <  1:878842‑M1/149‑96 (MQ=255)
                                                                                               ataatTGAAATGATATTATTATTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa                                                     <  1:1164426‑M1/150‑98 (MQ=255)
                                                                                                 aatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaag                                                   <  1:1528113‑M1/150‑100 (MQ=255)
                                                                                                  atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagatatgcttagccaatctctatttgattgaattgaaaga                                                  >  1:436279‑M1/1‑50 (MQ=255)
                                                                                                  atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaaga                                                  >  2:597900‑M1/1‑50 (MQ=255)
                                                                                                  atTGAAATGATATTATTAATTCCAATGCATTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaaga                                                  >  2:1005938‑M1/1‑50 (MQ=255)
                                                                                                       aaTGATATTATTAATTCCACTGCCTTTGGTAGATGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactacttgaactttaatcagaaaagatagacatgcttagccaatctctatttgatttaattgaatgatgttt                                             <  2:1382021‑M1/150‑106 (MQ=255)
                                                                                                        aTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttg                                            <  2:969547‑M1/150‑107 (MQ=255)
                                                                                                             attattAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaatttaaagatgtttgttaag                                       >  2:1738604‑M1/1‑39 (MQ=255)
                                                                                                              ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaagg                                      <  1:310483‑M1/150‑113 (MQ=255)
                                                                                                               tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaatatgtttgttaagtc                                     >  1:740174‑M1/1‑37 (MQ=255)
                                                                                                                  taATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatg                                  >  1:694784‑M1/1‑34 (MQ=255)
                                                                                                                   aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgg                                 >  1:1887008‑M1/1‑33 (MQ=255)
                                                                                                                   aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgg                                 >  2:1482258‑M1/1‑33 (MQ=255)
                                                                                                                    aTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgga                                <  2:1661122‑M1/150‑119 (MQ=255)
                                                                                                                    aTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgga                                <  1:1517615‑M1/150‑119 (MQ=255)
                                                                                                                       ccACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgc                             >  1:1382396‑M1/1‑29 (MQ=255)
                                                                                                                        cACTGCCTTTGGTTGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgca                            >  1:1031525‑M1/1‑28 (MQ=255)
                                                                                                                           tGCCTTTGGTAGAGGAAAGTGCTAAaaaataatcaattgttaaattattctccacttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatatgaatgaatagaaagatgcttcttaaggcatggatgcaagc                         <  2:261634‑M1/150‑126 (MQ=255)
                                                                                                                            gCCTTTGGTAGGGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagct                        >  1:176‑M1/1‑24 (MQ=255)
                                                                                                                              cTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctat                      <  1:1774854‑M1/150‑129 (MQ=255)
                                                                                                                              cTTTGGTAGAGGAAAGTGATAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatgtgattgaattgaaagatgtttgttaaggcatggatgcaagctat                      >  2:1465791‑M1/1‑22 (MQ=255)
                                                                                                                               tttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctata                     <  1:1431909‑M1/150‑130 (MQ=255)
                                                                                                                                 tGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatatcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctataga                   <  2:1009462‑M1/150‑132 (MQ=255)
                                                                                                                                   gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagatt                 <  2:1412360‑M1/150‑134 (MQ=255)
                                                                                                                                    tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattc                >  1:208063‑M1/1‑16 (MQ=255)
                                                                                                                                     agagGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattct               <  2:1078918‑M1/150‑136 (MQ=255)
                                                                                                                                       agGAAAGTGCTAAaaaataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctga             <  2:558230‑M1/150‑138 (MQ=255)
                                                                                                                                         gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgata           <  2:451143‑M1/150‑140 (MQ=255)
                                                                                                                                          aaaGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaacgatgtttgttaagtcatggatgcaagctatagattctgatac          <  1:306968‑M1/150‑141 (MQ=255)
                                                                                                                                             gTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggt       >  1:1186232‑M1/1‑7 (MQ=255)
                                                                                                                                             gTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaagcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaagtcatggatgcaaactatagattctgatactgt       >  1:143923‑M1/1‑7 (MQ=255)
                                                                                                                                                cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggtcaa    >  1:1125930‑M1/1‑4 (MQ=255)
                                                                                                                                                 tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggtcaat   >  1:4662‑M1/1‑3 (MQ=255)
                                                                                                                                                  aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggtcaata  >  2:373115‑M1/1‑2 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TTCTCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCG  >  NC_000913/1299351‑1299646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.