| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 2,399,785 | Δ40 bp | 51.4% | coding (342‑381/2727 nt) | nuoG ← | NADH:quinone oxidoreductase subunit G |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2399784 | 21 (0.500) | 20 (0.480) | 18/262 | NT | 51.4% | coding (382/2727 nt) | nuoG | NADH:quinone oxidoreductase subunit G |
| ? | NC_000913 | 2399825 = | 17 (0.410) | coding (341/2727 nt) | nuoG | NADH:quinone oxidoreductase subunit G | |||||
CGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGATGCAGCGGTTCATTTCGTGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2399646‑2399784‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGCCGGTGTC > NC_000913/2399825‑2399962 CGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGATGCAGCGGTTCATTTCGTGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGAT < 1:8071/143‑1 ATCTGTGCCGTCAGAGTAATCTTGGGAGTAACGCACACAGCGGTAGCAGGCGATGCAGCGGTTCATTTCGTGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCC < 2:370200/143‑1 CTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGATGCAGCGGTTCATTTCGTGCGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTCACATGGCAGTTACCGCCCT > 2:164797/1‑143 TACCGTCAGCGGGAGGGTTGTAGTTACGCTCACGGCGGTAGCAGGCGTTGCGGCGGTTCATTTCGTGAGGGATGGATGGCCCCATATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTT < 2:593359/143‑1 TCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGTCGATGCAGCGGTTCATTTCGTGAGAGGTGACTTGCCCCAAATCCTGATTACGGTGGGGACGCTTAGTGAAACGGTAAGATGGCAGGTACCGCCCTCTTCACAc > 2:99381/1‑142 TAATCTTTGTAGTAACGCACACAACTATAGCAGGCGATGCAGCGGTTCATTTCGTGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGg > 2:500942/1‑142 ACAGCGGTAGCAGGCGATGCAGCGGTTCATTTCGTGAGAGATGGATGGCCCCAAATCCTGATTACGGTGTGGACGGTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGT < 1:561637/143‑1 AGCGGTAGCAGGCGATGCAGCGGTTCATTTCGCGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCA < 1:78441/143‑1 CGGTAGGAGGCGATGCAGCGGTTCATTTCGTGAGAGATGAATGGCCCCAAATCCTGATCACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGGACTTGGTCTTC < 2:178655/143‑1 TAGCGGGCGAGGCAGCGGTTCATTCCGTGAGAGATGAAGGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAAC < 1:491067/143‑1 TAGCAGGCGTGGCAGCGGTTCATTTCGTGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAAC < 1:355903/143‑1 TAGCAGGCGATGCAGCGGTTCATTTCGTGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAAC < 1:656368/143‑1 TTCGTGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTAGCGCCCTCTTCACATACCGGACAGTAGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCGTTCACGGga > 1:391614/1‑141 ATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTCCACGGACCTGTTTCGCc > 2:689056/1‑142 TGAATGTCCCCAAATCCTGATTACGGTGGGTACGTTTTGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTT < 1:337027/143‑1 GAAGGGCCCCAAATCCTGATTACAGTGGGTACGTGTGGTCAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTC < 1:38176/143‑1 cTCCTGAGTACGGTGGGTACGTTTGGGGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAAT < 1:499149/142‑1 CGGTGGGTACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGGTGGTCATCAACCACTCGACCACGCTTTCACGGAACGGTTTCGCTTCTTCGTCGTCAATGGAAATAAAG > 1:306834/1‑143 TACGTTTGGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCCTCGTCGTCAACGGAAATGAAGGTGCCAT > 2:459578/1‑143 TGGTGACACGGTAAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAG < 1:291595/143‑1 GGTGAAACGGTAAGATGGCAGTTACCGCCCTCTTCACATGCCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGC < 1:339380/143‑1 CGGTAAGCTGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTCGTTGGTCATCAACCTCTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGCCGGTGTC < 1:151584/143‑1 CGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGATGCAGCGGTTCATTTCGTGAGAGATGAATGGCCCCAAATCCTGATTACGGTGGGTACGTTTGGTGAAACGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2399646‑2399784‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGATGGCAGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGCCGGTGTC > NC_000913/2399825‑2399962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |