| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,884,303 | G→T | 20.4% | M372I (ATG→ATT) | yeaV → | putative transporter YeaV |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,884,303 | 0 | G | T | 20.4% | 35.7 / 5.7 | 25 | M372I (ATG→ATT) | yeaV | putative transporter YeaV |
| Reads supporting (aligned to +/- strand): ref base G (12/8); new base T (3/2); total (15/10) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.87e-01 | |||||||||||
GTGCTGGAAACACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTGCTTCGCTGGAAACGATGAAAACCACCGT > NC_000913/1884163‑1884443 | gTGCTGGAAACACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATggc < 1:682121/143‑1 (MQ=255) gCTGGAAACACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATggcgg < 2:51947/143‑1 (MQ=255) tGGAAACACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCCTACCTGGGCGTGATGATTATTTTCCTTGCCGCGAATATGGATGCAGTGGCCTACAGCAGGccggcg > 2:305802/1‑143 (MQ=255) ggAAACACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGACGCATACCTGGGCGTGATGATTATTTGCCTTGACTCGCATAGGGAGGCAGTAGCCAACAACATGttggcgg > 2:962/1‑142 (MQ=255) aaCACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGAGAATATTACTGTCCTCGCATGCGGATGCACGCGCCTACACCAGGGCGGCGAcga > 2:7521/1‑141 (MQ=255) cacTGGGCGTCGAAACAGCTGTTCAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATTGCGTCGACCAGt < 2:590185/143‑1 (MQ=255) ggcgAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGGGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCCACCAGTACGCGTac > 1:44703/1‑142 (MQ=255) aaaCAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAAtctc > 1:705357/1‑143 (MQ=255) gTCGCTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTg < 1:46847/143‑1 (MQ=255) tCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATTGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTgg > 1:228538/1‑143 (MQ=255) tCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTgg < 1:255202/143‑1 (MQ=255) tCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTgg > 2:552586/1‑143 (MQ=255) ttGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATATCCAGGAAGGTGACGATCCTGACCGTGGGCt > 2:372036/1‑143 (MQ=255) ttCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGCAGGTGACGCTCCTGACCGTGGGCTGCGTCTTTTCTGGTGCgt > 1:292321/1‑143 (MQ=255) gaTACCTGGGCGTGATGATGATTTTCCGTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCAct < 2:447917/142‑1 (MQ=255) tGGGCGTGATGATTCTTTTCCTTGCCTCGCATGTGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATc < 2:359118/143‑1 (MQ=255) gatgatTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGAAAAATAAGAGGAAGCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTGTGGTGCGTGGTGATCACTCTGATGCCGCttt > 1:518321/1‑143 (MQ=255) gatTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCa > 1:791953/1‑143 (MQ=255) attattTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATTGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGAATAGACTAGTTCGTGGGGATCACTCTGATCCCGCTTTccct > 2:360121/1‑141 (MQ=255) ttattTGCCTTGCCCCGCATCTGGATGCAGTGGCCTACACCAGGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATc < 1:141272/143‑1 (MQ=255) ggCCTAGCAGAGGGACGTAGTCGCGTACGCCATGGCGGGGACCGGTACGCGTCATCGCCAGGAAGGTGCCGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCg < 2:237089/142‑1 (MQ=255) cTCGCATATGGATGCAGTGGCCTACACCATTGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTCCTCGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTg > 2:80291/1‑143 (MQ=255) cTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTg < 1:552586/143‑1 (MQ=255) tCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGAGCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGCTCCCGCCTTCCATCTTGTGTACCGGTGc > 2:610938/1‑143 (MQ=255) aGTGGCCTACAGCATTGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTCTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTGCTTCGCTGGAAACGa < 1:298432/143‑1 (MQ=255) cTACACCATGGCAGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGACTGCGTCTTTTCTGGTGCGTGCTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTGCTTCGCTGGAAACGATGaaaa > 1:227644/1‑143 (MQ=255) aTGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTGCTTCGCTGGAAACGATGAAAACCACcgt < 1:32112/143‑1 (MQ=255) | GTGCTGGAAACACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTGCTTCGCTGGAAACGATGAAAACCACCGT > NC_000913/1884163‑1884443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |