| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,832,800 | C→A | 5.7% | A580S (GCG→TCG) | yicI ← | alpha‑D‑xyloside xylohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,832,800 | 0 | C | A | 5.7% | 205.6 / 3.0 | 80 | A580S (GCG→TCG) | yicI | alpha‑D‑xyloside xylohydrolase |
| Reads supporting (aligned to +/- strand): ref base C (27/48); new base A (3/2); total (30/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.13e-01 | |||||||||||
TGCACATCGCCCGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCGTGTAAACGGCTATGGCTGGAGA > NC_000913/3832658‑3832940 | tGCACATCGCCCGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCCTCGGCGTACCCCGCGCGTTCGc > 1:549302/1‑143 (MQ=255) acaTCGCCCGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGTAACTCCATGATCATGGCACGCATCATCGGCATACCCAGCGCATTCGCAcg > 1:211441/1‑143 (MQ=255) acaTCGCCCGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCCCGCGTTCGCAcg > 2:254922/1‑143 (MQ=255) aTCGCGCGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACGAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCAcgcg < 2:383833/143‑1 (MQ=255) gcgcGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAg < 2:382845/140‑1 (MQ=255) gCCGGCTGCAGGGAACACCGGCG‑CAGTCATCACGTTGTGGGCTGACATGTATGGACGGCGAAGGTAATCACAAGCCGGATCGTCCGGGAACGCCATCATCATGGCGCGCATCATCGGGGTACCGCGCGCGTGCGAACgcgcgg < 2:347774/143‑3 (MQ=255) gCCCGCTTCGGTGAACACCGGCGCCGAGTAT‑GCGTTGTCGCCTAAGATGTCTGGACGGTCAAGGTAATCACAAGCCGGATCGTCCGCGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAg < 2:202333/143‑1 (MQ=255) cccGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCCGGAACTCCATCATCATGGCCCGCATCATCGGCCTACCCCGCGCGTTCGCACGCGCAGc > 2:153556/1‑143 (MQ=255) cccGCTCAAGTTAACGCCTGCG‑CAACCATCACGTTGCCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTGCGAACgcgcggg < 1:300751/143‑4 (MQ=255) cGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCtt > 1:506540/1‑143 (MQ=255) cTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGACCTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCa < 2:67898/143‑1 (MQ=255) ttCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGCACTCCATCATCATGGCCCGCATCCTCGGCGTACCCCGCGCGTTCGCCCGCGCAGCTTCAc > 1:420658/1‑143 (MQ=255) gTGAACGCCGGCG‑CACCCATCGCGTTGTCGCCTAACAGCTGTGGACGGTCAAGGTAATCACAAGCCGGATCGCCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATa < 2:810195/143‑1 (MQ=255) gAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACa < 2:724836/143‑1 (MQ=255) gAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTACGAGAGCGCGGCTCCGCGGTACa > 1:301163/1‑143 (MQ=255) acacCGGCG‑CAACCCTCACGTTGTCGCCTCACGTGTAGTGGCGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGa < 2:242176/143‑1 (MQ=255) cgccg‑cAACCAGCACGTTGTCGCCCAACATGTAGTGACGGCCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCAGCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACg < 1:105534/140‑1 (MQ=255) cGGCG‑CAACCGTCACGCTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACGCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACg < 2:372989/143‑1 (MQ=255) ggCG‑CAACCATCACTTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACgg < 2:442316/143‑1 (MQ=255) aaCCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGcatca < 1:813214/143‑1 (MQ=255) aTCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCCGCTTCCCGATGCCGCTACGGCACCATGCg > 1:34242/1‑143 (MQ=255) aTCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCg < 1:797654/143‑1 (MQ=255) cggctcaCATGTATTGACGAATATGGTTATCACGAGCCGGGTCGTCCGGGACCTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGt < 2:753569/137‑1 (MQ=255) cGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGt < 1:731434/143‑1 (MQ=255) cGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGt < 1:175701/143‑1 (MQ=255) gCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGCACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGCTACAGATACGGCATCATGCGGCATTTCAGtt > 1:200085/1‑143 (MQ=255) cTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGc < 2:153002/143‑1 (MQ=255) accATGTCTGGACTGTCAAGGTAATCTCACGCCGGATCGTCCGGGACCTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGt < 2:641941/141‑1 (MQ=255) aaCATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGt < 1:265493/143‑1 (MQ=255) aaCATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGt < 1:141124/143‑1 (MQ=255) cATGTATGGACGGTCAAGGGAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTga < 1:210120/143‑1 (MQ=255) aTGTACTCACGCTGAATGTAATCACAGTCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCATCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTgaa < 2:659658/143‑1 (MQ=255) gTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCCTCCTCATGGCCCGCATCATCGGCGTACCCCACGCCTTCGCACGCGCAGCTACACGAAACAGAAACGTCATCATGCGGCATTTCAGTTGCGTGCAGAAGCGcacca > 1:652914/1‑143 (MQ=255) aaGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACTCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACAt < 1:413993/143‑1 (MQ=255) aGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATc > 2:78984/1‑143 (MQ=255) tagtCACACGCCGGATCGTCCGGGAGCTCGAGCATCGTGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATcaca < 2:226726/140‑1 (MQ=255) tAATCACACGCCGGACCGTCCGGGATCTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATcaca < 2:825741/143‑1 (MQ=255) tAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATcaca < 1:392837/143‑1 (MQ=255) caaTCACAAGCCGGATCGTCCGGGGACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTGCGCACGCGCAGCTGCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATcaca < 1:555081/142‑1 (MQ=255) aaTCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAg < 2:476937/143‑1 (MQ=255) aTCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTCACCCCCTCGTTCGCACCCGCAGCCTCACGATCCCCATACGGCATCATACGGCACCTCAGTACCGCGCAGCAGCGCACCAAATCAGAgg > 2:738812/1‑143 (MQ=255) tCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGa < 1:717900/143‑1 (MQ=255) tCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTAGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGACAAAGCGCAACACATAACACGa > 2:641587/1‑143 (MQ=255) acaAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACt > 2:389020/1‑143 (MQ=255) caAGCCGGATCGTCCGGGAACTCCATCATCATGGTCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATCTCAGTTGCGAGAAGACCAGCACCACATCACAGGACtc > 2:662045/1‑143 (MQ=255) aaGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGAAtca > 2:449313/1‑143 (MQ=255) ggATCGTCCGGGACCTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCatcatc < 2:313753/143‑1 (MQ=255) cctCCGGCACCTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAg < 2:374322/141‑1 (MQ=255) cGTCCGGGAGCTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAg < 2:519092/143‑1 (MQ=255) cGTCCGGGACGTCCATCTTCATGGCCCGCATCATCGGCCCCCCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAg < 2:581354/143‑1 (MQ=255) cGTCCGGGAACTTCATTATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTGACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAg < 2:382265/143‑1 (MQ=255) gTCCGGGAACGCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAgg < 1:696610/143‑1 (MQ=255) cgccGGGATCTCCATCATCATGGCCCGCATCACCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTGCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAgg < 1:121925/141‑1 (MQ=255) tCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCCTGCGGCATTTCAGCTGCGCGAAAACGCGCCCCCCATCACAGGAATAATGATCCTAGGc > 2:791654/1‑143 (MQ=255) tCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGGAGGc > 1:823355/1‑143 (MQ=255) ccggtcaCTCCAGCACCGTGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGcc < 1:329716/137‑1 (MQ=255) ccGGGAACTCCATCATCATGGCCCGCATCAGCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATCCAGATACGGCATCATGCGGCAGTTCAGTGGCGTGAGGGCGCGCACCCCATCCCAGGACTCATCATCGCATGcc > 1:21968/1‑143 (MQ=255) gagcTCCATCATCATGGACCGCATCATCGGCGTACCCCGCGCGGTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCAGTTCAGTGGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACg < 1:90953/140‑1 (MQ=255) gaccTCCATCATCATGGCCCGCATCACCGGCGTGCCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCCAATACTTGGACTCATTATCGTAGGCCCACg < 2:722636/140‑1 (MQ=255) ccTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATCCGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGc < 1:65876/142‑1 (MQ=255) catcatcatGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGCTACGGCATCATGCGGCATTTCAGTCGCGTGAAGCAGCGCACCACATCACAGGACTCCCCAGCGTCGGCCCACGGcagcc > 1:315362/1‑140 (MQ=255) tcatcatGGCCCGCATCATCAGCGTACCCCGAGCGTGCGCACGCGCAGCTTCACGATACAGATACGGCATCATGAGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCACACGGCACCCGa > 2:627107/1‑143 (MQ=255) gCCCGCCTCACCAGCGACCCCCGCGCGTTGGCACGCGCAGCTTCCCGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGAttt < 2:752778/143‑1 (MQ=255) gCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCATCTTCACGATACAGATACGGCATCATCCGGCATTTAAGTTGCGAGAAGAAGCGCACCAAATCACAGGACTCATCACCATACGACCCCGGCACAAGATAGGAtat > 2:193343/1‑141 (MQ=255) catcGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCgt < 1:757624/143‑1 (MQ=255) catcGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACACAACATCGTAGGCCCACGACACACGATACGACTCGCTACCgt > 2:400521/1‑143 (MQ=255) tcGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCgtgt < 2:475767/143‑1 (MQ=255) tcGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCgtgt < 1:449313/143‑1 (MQ=255) gCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGACGCGCACCACATCACAGGACTCATCATCGTCGGCCCACGGCACACGATCAGACTTGCTGCCGTGTaca > 1:631374/1‑141 (MQ=255) gCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACACCACCGGCCTCATCATCGTAGGCCCACGGCACACGATGAGAGTTGCTACCGTGTaaa > 2:624111/1‑143 (MQ=255) cGTACCCCGCGCGTTCGCACGCGCAGCTGCACGATACAGATACGGCGTCATGCGGCATTTCAGTTGCGTGAAGAAGGGCACCACATCTCAGGACTCAGCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCGTGTAAAc < 2:23553/143‑1 (MQ=255) tcccccGCGTGTTCGCACGCGCAGCCTCACGACACAGCTACGGCCTCATGCGGCATTTCAGTCGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCGTGTAAACgg < 1:552101/141‑1 (MQ=255) tACCCCGCGCGTTCGCACTCGCAGCTCCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCGTGTAAACgg < 2:506540/143‑1 (MQ=255) gctgcgcgTGCGAACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCGCACGATAAGACTTGCTCCCGTGTACACGGCtc > 1:470199/4‑142 (MQ=255) ccGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATCAGATTTGCTACCGTATAAACGGCTAt > 2:317099/1‑143 (MQ=255) ccGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTGGCGACCGTGGAAACGGCTAt > 2:5206/1‑143 (MQ=255) tgcgcgTGCGAACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCAACAACGAAGGCACAGGGCACACGATAAGATTTGCTACCGTGTAAACAGCTaag > 2:242983/2‑141 (MQ=255) cgcgcgTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACCCATCATCGTAGGCCCACGGCACACGATAAGATCTGCTACCGTGTAAACGGCGAtc > 1:169602/1‑142 (MQ=255) gcgcgTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGAATTGCTACCGTGTAAACGGCTATga > 2:278282/1‑142 (MQ=255) gcccgTTCGCACGCTCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCGTGTAAACGGCTATgg < 2:592642/140‑1 (MQ=255) cGCACGCGCAGCTTCTCTATACAGATACGGCATCATGCGGCATTTCAGTTGCTTGAAGAAGCGCACCACATCACATTATTTATCATCGTAGGCACACGGCAAATGATAAGATTTGCGACCGTGTAAACGGCTATGGCTGgaga < 1:626742/143‑1 (MQ=255) | TGCACATCGCCCGCTTCAGTGAACACCGGCG‑CAACCATCACGTTGTCGCCTAACATGTATTGACGGTCAAGGTAATCACAAGCCGGATCGTCCGGGAACTCCATCATCATGGCCCGCATCATCGGCGTACCCCGCGCGTTCGCACGCGCAGCTTCACGATACAGATACGGCATCATGCGGCATTTCAGTTGCGTGAAGAAGCGCACCACATCACAGGACTCATCATCGTAGGCCCACGGCACACGATAAGATTTGCTACCGTGTAAACGGCTATGGCTGGAGA > NC_000913/3832658‑3832940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |