| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,261 | G→T | 6.3% | intergenic (+31/‑186) | bipA → / → yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,261 | 0 | G | T | 6.3% | 222.5 / 3.7 | 88 | intergenic (+31/‑186) | bipA/yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| Reads supporting (aligned to +/- strand): ref base G (37/45); new base T (2/4); total (39/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.99e-01 | |||||||||||
CATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGC > NC_000913/4060119‑4060400 | cagcGATGATGACGAACTGGTACAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAATCGATCGTCGCCGCTCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg < 2:604388/140‑1 (MQ=255)cATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGACAGACGAATAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg > 2:604512/1‑143 (MQ=255) cGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGa < 1:573767/143‑1 (MQ=255) atgatgACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAAAGATGGTCGCCGCGCCAACCGCGCACCGAAAGACGATCAATGTCGGTGTTTAGTCAGCAAAAACCTGCCcgcggcg > 1:762062/1‑140 (MQ=255) gatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGc < 1:331142/143‑1 (MQ=255) gatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGc > 2:68558/1‑143 (MQ=255) atgaCGAACTGGTAGAAGCGCCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCa < 1:37011/143‑1 (MQ=255) tgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAg < 2:52188/143‑1 (MQ=255) tgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATGCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAg < 1:430223/143‑1 (MQ=255) gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAACACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTCCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAgg > 2:699460/1‑143 (MQ=255) gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGCCACCTGACGGGAAACGATCGTCGCCGCGCCAACCGCGCACCGAACGACGATTAATTCCGTTTTTTAGTCATAAAAAACCTCCCAGCGCTGGCAgg > 2:175075/1‑143 (MQ=255) aaCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACATGCCAGCGATGGCAGG‑tttt > 2:725270/1‑143 (MQ=255) aCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTACACGTCACCTGACGGAAAACGCTCGTCGCCGGGCCCACCGCGCACCGAAAGACGCTTAATCCCGTTTTTTGGTCATGTAACACCTGCCAGCGATGGCAGG‑ttttt > 2:314157/1‑143 (MQ=255) tGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttttttt > 1:731387/1‑143 (MQ=255) tGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttttttt > 1:759781/1‑143 (MQ=255) gggataaGTTACTCCGACCTCTATCCGTAGTCGTAAACGTCACCTGACGGGAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttttat < 1:560547/138‑3 (MQ=255) gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAGCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAACACACCTGCCAGCGATGGCAGG‑ttttttttt > 1:622962/1‑143 (MQ=255) tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTg < 2:731387/143‑1 (MQ=255) aaGTGACTCCGCCCTCTATCCGTATGCTCAAACGTCACATGACGGAAAGCGATCGTCGCCGCGCCAACCGCTAACCGAAAGACGATTAATTTCTTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCt < 2:444628/143‑1 (MQ=255) tgccTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTc < 1:549359/140‑1 (MQ=255) aCTCCGCCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAACCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAACACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGt < 1:38453/143‑1 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAACAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGa > 2:224852/1‑143 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGCTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TCTTTTTTTGCCTGTGGTGa > 2:452300/1‑143 (MQ=255) gACCTCTAGCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAgcg < 1:461254/143‑1 (MQ=255) tctATCCGTATTCGTAAACGTCACCTGACGGAACACGATCGTAGCCGCGCCAACCGCGCACCGAAAGACGCTTACTTTCGTTTTTTAGTCATAAAAAACATGCCAGCGATGGCAGG‑CTTATTTTTGCCTCTCGTGAGCGgacg > 2:99806/1‑142 (MQ=255) aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGGCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCa < 1:652429/143‑1 (MQ=255) cGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATg > 2:17930/1‑143 (MQ=255) cGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATCAATCTCGTTTTTTCGTCATAACAAACCTGCCAGCGAAGGCCGG‑TATCTTTTTGCCTGTCGTGAGCGCACCCCAGTg > 2:168549/1‑143 (MQ=255) ggtgggaaaCGTCACCTGAGGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTCCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa < 2:353496/137‑1 (MQ=255) atccGTAACCGACACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAGAGATGATTATTTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa < 1:223716/140‑1 (MQ=255) aTTCGTACACGTCACCCGACTGAAAACGATCGTCTCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa < 2:546891/143‑1 (MQ=255) aTTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCTCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa < 2:797882/143‑1 (MQ=255) aTTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa > 1:591470/1‑143 (MQ=255) aTTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa < 1:215391/143‑1 (MQ=255) tgcGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 2:512518/141‑1 (MQ=255) tccGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 2:645961/141‑1 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAt > 1:670569/1‑143 (MQ=255) tAAACGTCACCTGACGGTAAACGATCGTCGCCGCCCCAACCGCCCCCCGAAAGACGCTTACTTTCGGTTTTTCGTCAGCAAAACCCTGCCAGCGATGGCAGG‑TTTTGTTTTGCGTGGCGTGACCCCACACCCGTGCgcgcacc > 2:545971/1‑137 (MQ=255) aaaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCACCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtct < 1:682298/143‑1 (MQ=255) aaaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTGATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACCCACATGAGAGTAtct > 2:277858/1‑143 (MQ=255) cggcACCTGGCGGAAAACGATCGTCGCAGCACCAACAGCGCATCGAAAGAAGATAAATATAGTATTTCAGTCAGAAAAAACCGGCCAGCGATGGCAGG‑TATTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTccc < 2:139454/140‑1 (MQ=255) ccTGACGGAAAACGAGCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTACGTTTTTTAGTCATAAAAAACCTGCCCGCGATGGCAGG‑TTTTTTTTTGCCTGTCGCGAGCGCACACCAATGCGAGCATCTCCCTtatc > 2:142377/1‑142 (MQ=255) cTGACGGAATACGATTGTCGCCGCGCCGACCGCTCACCGAAAGACGATTTATTTCGTTTTTTAGTCATAAAAAGCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCGTATaa < 2:507793/143‑1 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTc > 1:252719/1‑143 (MQ=255) cGGAAATCGATCGTCGCCGCGCCAACCGCGCACCGACAGACGATTAATTTCGTTTTTTACTCATAAACAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCt < 2:62692/143‑1 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTTTTGTTAGCGCACAACAATACGAGTATCGCCCTTTCAAGtata > 2:721557/1‑140 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTGTTTGTCGGTCGTGAGGGCACACCAATGCGAGTATCTCCCTTATAAGTCtg > 2:617444/1‑143 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCTCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 1:173214/143‑1 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg > 1:254265/1‑143 (MQ=255) aaaaCGATCGTCCCCGGGTCCACCGCGCACCGAAAGACGATTAGTTGCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 2:559946/143‑1 (MQ=255) acaCGCTCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAGACCTGCCAGCGATGGCAGGTTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 2:706562/141‑1 (MQ=255) aaaCGATCGGCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTGTAGTCATAAAATAGCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGGGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg < 2:531952/143‑1 (MQ=255) accGATCGTCGCCGCGCCAGCCGCGCACCGTGAGACTATTAATTTCGTTTTTTAGTCATAAAATACCTGCCAGCGGTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGTGAGTATCTCCCTTATAAGTCTGTGGt < 2:629467/141‑1 (MQ=255) aaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGCGTATATCCCTTATAAGTCTGTGGt > 1:510191/1‑143 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAAATTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑CTTTTTTTTGCCTGTCGTGCGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCa > 1:672127/1‑143 (MQ=255) tcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATACAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCTTGTCGTGAGCGCACACAAATGAGAGTATCTCCCTTATAAGTCTGTGGTTACGTcca > 1:99401/1‑141 (MQ=255) ggcggcgcCAACCGCGCATCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCGGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAt < 2:76201/139‑1 (MQ=255) cgtcgcgCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAATTACCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAt < 2:40841/140‑1 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATag > 1:360910/1‑143 (MQ=255) gcgcCAACCGCGCACCGAAAGACGATTAATTTCGTTTTGTAGTCATAAAAAACCTGCAAGCGATGGCAGG‑TTTTTTTTTGACTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTAAAAGTCTGTGGTTACGTCAATagag < 1:44770/143‑1 (MQ=255) ccAACCGCGCACCGAAAGACGATTACTTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGCGCGCACACCAATGCGAGTCTCTCCCTTATACGTCCGTGGTTCCGCCCATACAgcgc > 2:155173/1‑143 (MQ=255) aCCGCGCACCGAAAGACGATTAATTACGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCtct > 1:361275/1‑141 (MQ=255) cgcgCACCGAAAGACGATTACTTTCGTTTTTTAGTCATAAAAAGCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTCTAATTCTATGGTTACGTCAATAGAGAGCTTTGt < 2:253130/143‑1 (MQ=255) gcgcACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTGTGTc > 1:102590/1‑143 (MQ=255) cgcACCGAGAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTca < 2:689294/143‑1 (MQ=255) cGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAtt < 1:231702/143‑1 (MQ=255) cGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAtt > 1:453701/1‑143 (MQ=255) aaaGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTAt < 1:805624/143‑1 (MQ=255) aGACGCTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTGTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCCCCATTATCt < 2:629478/143‑1 (MQ=255) aCGATTAATTTCTTTTTTTAGTCATAAAAATCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGc < 2:750951/143‑1 (MQ=255) aCGATTAATTTCTTTGTTTATTCACAAGAAACCTGCCAGCGATCGCAGG‑TTTTTGTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGc < 2:666183/143‑1 (MQ=255) aCGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGc < 1:104581/143‑1 (MQ=255) aCGATTAATTACAATTCTAAGTCATGCAGAACCTGCCAGCGATCGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGc < 1:553419/143‑1 (MQ=255) ttCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATa < 1:343007/143‑1 (MQ=255) gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACATTAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGc > 2:220672/1‑143 (MQ=255) ttttttAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCTTGTCGTGAGCGCACACCAATGAGAGTATCTCCCTTATACGTCTGTGGTTACGTCAGTAGAGCGCTTTGTCACAATTATCTGCAAAGTCATACGcc > 1:786726/1‑143 (MQ=255) ttttttAGTCATAAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTCTCACCATTATCTGCAAATTCATACGcag > 1:105354/1‑141 (MQ=255) ttttttAGTCATAAAAAACCTGCCAGAGATGGCAGG‑TTTTTTTTTGCCTGTAGTGAGCGCACACCAATGAGAGTATCTTCCGTATAAGTCTGTGGTTAAGTAAATAGAGATATTTGTCACACTTATCTGCTAAGTCCTaatcc > 2:349972/1‑139 (MQ=255) gtttAGTCAGAAAGAGCGTGCCAGAGAGGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGt < 1:720444/142‑1 (MQ=255) tAGTCATAACACCCCTGCCCTCGTTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTaa < 1:731206/143‑1 (MQ=255) tCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAAtt > 1:505766/1‑143 (MQ=255) aaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCAAACCCATGCGAGTATCGTCCTTATAAGTCTGTGGTTACTTCAATAGAGAGTCTTGTCCCCATTAGCTGCAAAGCTCTACGCCGTTTATTGcg > 2:309492/3‑142 (MQ=255) tAAAAAACCTTCCAGCGATGGGAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGctt < 1:68558/143‑1 (MQ=255) aaagaCCTGCCAGCGATGGCAGG‑TTCCTTTTGGCCTGTCGTGAGCGCACACCAATACGAGTATCTCGCAGATAAGTCTGTGGGTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGctttc < 2:14883/143‑1 (MQ=255) gccTGCCAGCGAGTGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCtttt < 2:104686/142‑1 (MQ=255) aCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGACTTTCTCCCTTATAAGTCTGTGGTTACGTCGATAGAAAGCTTAGTAACAATTATCTGGAAACTCATACGACGTACGTTGgtttctcta > 2:509452/1‑140 (MQ=255) tGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCCCAAACCTGAATCGCTCTCTGTGATAAGTCTGTGGTGACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg < 1:186447/143‑1 (MQ=255) tGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg > 1:501807/1‑143 (MQ=255) tGCCAGCGATGGCAGG‑TTTTTTCTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg < 1:17930/143‑1 (MQ=255) ccAGCGATGGCGGG‑TTTTGTCTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGgc < 2:520132/143‑1 (MQ=255) ccAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTACTAAGTCAGGGGTTACGTCAATAGAGAGCATTGTAACAATTATCTGCAAAGACATACGCCGTTAATTGCTTTCTTTTTTGgc > 1:366774/1‑143 (MQ=255) | CATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGC > NC_000913/4060119‑4060400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |