| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,314,233 | A→T | 9.8% | intergenic (+36/+111) | yjdP → / ← phnP | protein YjdP/5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,314,233 | 0 | A | T | 9.8% | 213.6 / 13.6 | 86 | intergenic (+36/+111) | yjdP/phnP | protein YjdP/5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base A (31/42); new base T (3/5); total (35/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.74e-01 | |||||||||||
TGAAGATCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAAC > NC_000913/4314092‑4314374 | tGAAGATCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAt > 2:345169/1‑143 (MQ=255) ggataTCGGCGCGGGCAGCTGGCCGATCTCCAGCGCCGGCTTGTTCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATg < 1:254399/139‑1 (MQ=255) gcggtCGCCGCAGGTAGCTGGACGATCGCCAGCGCCAGCGTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAAGGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATgg < 2:597613/139‑1 (MQ=255) gagctCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGGCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATgg < 2:677763/139‑1 (MQ=255) ggATCGCCGCAGGCAGCTGGACGTTCGCCAGCGACAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATggg < 1:260490/142‑1 (MQ=255) aGATCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATggg > 2:220229/1‑143 (MQ=255) ggtCGCCGCAGGCAGCTGGACGATCGCGAGCGGGAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCTCCCCATTgggg < 1:104909/141‑1 (MQ=255) gATCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATgggg < 1:500568/143‑1 (MQ=255) aTCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGGGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGggga > 1:789085/1‑143 (MQ=255) cgccgcAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGgggaga < 1:77044/143‑1 (MQ=255) cgccgcAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGgggaga < 1:276569/143‑1 (MQ=255) ggcgcAGGCAGCTGGACGAGCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGgggagag < 1:404989/141‑1 (MQ=255) gccgcAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATGAGGAGCGTCGGCACCTGGGGTATACAGAGCGGAGACTGGCAGATGAGTCTGCGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGgggagcg > 1:176157/1‑141 (MQ=255) gccgcAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGgggagag > 1:532478/1‑143 (MQ=255) cgcAGGCAGCTGGACGATCGCCAGCGTCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGAGGAGGTTGGGTATGGAGCAGGCATCGCCCCTCTCCCCATTGgggtgaggg < 1:290004/143‑1 (MQ=255) ggaggcagCTGGACGATCGCCAGCGCAAGCTTGATCAGGGGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGGGTAGGTATCGCCCCTCACCCCAATGgggagaggga < 2:291161/141‑1 (MQ=255) gcaggcggCTGGACGATCGCCAGCGGCAGATTGATCGGGAGCGTCGGCAACGGGGGGATGGAGAGCGGCGAACGGACGATGTGGATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCTCCCCATTGgggtgagggg < 2:11673/143‑2 (MQ=255) gcaggcagCTCGACGATCGCCAGCGCCAGCTTGATCAGGAGCGCCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCTCCCCATTGgggtgagggg < 1:480172/143‑2 (MQ=255) gcagCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGaaa < 1:775121/143‑1 (MQ=255) cagCTGGGCGAGCGCCGGCGCCAGCGTGAGCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGGGAATGGAAGATGAGTAGGGGCGATGAGGTGGGGTATGGAGCAGGCATCGCCCCTCACCCCACTGGGGAGAGGGAGaaaa < 1:42016/143‑1 (MQ=255) cgccagcgccagCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGCGAATGGGAGATGAGTATGGGCGGTGAGGTTGGGTAGGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGGGGGGGAGGAGGAgcgcgagat > 1:708221/1‑138 (MQ=255) gccagcgccagcTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATAtt < 2:474370/143‑1 (MQ=255) ccagcgccagcTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCACTCACCCCAATGGGGAGAGGCAGAAAACGAGCGCaaagctc > 2:441107/1‑138 (MQ=255) cgccagcTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAata > 1:667505/1‑143 (MQ=255) cccgtttGATCAGGAGCGTTGGAAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATc < 2:153548/138‑1 (MQ=255) agcTTGATCAGGAGCGTCGGCAAGTGGAGGATGAAGAGCGGAGAACGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGa < 1:376654/143‑1 (MQ=255) gcTTGATCAGGCGCCGTGGCAGCTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAg < 2:3143/143‑1 (MQ=255) gcTTGAGCAGGAGCGGCGGCAACGGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAg < 1:232300/143‑1 (MQ=255) ttgggcgggAGCGTCGGCAACTGGAGGATGAACAGCGGAGAATGGAAGGTGAGTATGGGCGAGGAGGTGGGGTATGGGGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGca < 1:285523/136‑1 (MQ=255) ttGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCCCACCCCAATGGGGAGGGGGACACAACGAGCGCAAGATTCAATATCGAGca > 2:232493/1‑143 (MQ=255) gcAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAAt < 1:640212/142‑1 (MQ=255) gAGCGTCGGCAACTGGAGGATGAAGAGCGGCGAATGGAAGATGACTATCGACGATGAGCGTGGGTATGGAGCAGACATCGCCCCACACCCCAAGGGGGAGAAGGAGAAAACGAGCGCAATATTCAAGATCGAACACAAGCgga > 2:59933/1‑142 (MQ=255) gAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAACATTCAACATCGAGCACAAGCGGt > 2:345130/1‑143 (MQ=255) cGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGAAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATAACGAGCACAATCGGTccc > 2:151634/1‑143 (MQ=255) gTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTcccc < 1:169594/143‑1 (MQ=255) tcgggcaCTGGCGGATGAAGAGGGGAGTATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCt < 2:272450/137‑1 (MQ=255) cGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGGAGAATCGGGCCCCTc > 1:508643/1‑143 (MQ=255) gCAACTGGAGGATGAAGAGCTGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGc < 1:320548/143‑1 (MQ=255) cAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGcc < 2:734636/143‑1 (MQ=255) gaggaTGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTg > 2:294679/1‑143 (MQ=255) gaTGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCGCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCAAGACGAATCGGACCCCTCGCCCCCCTgggg > 2:328384/1‑143 (MQ=255) aTGAAGAGCGGAGAATGGAAGATGGGTATGGGCGACGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAACACAATCGGTCCCCTCGCCCCTCTGGGga < 1:771625/143‑1 (MQ=255) tGAGGAGGGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGgag < 2:17145/143‑1 (MQ=255) gAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGAAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCCCCCCTCTGgagaga > 2:105443/1‑143 (MQ=255) aagacgggAGAATGGTAGATGAGGATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGagag < 1:158854/137‑1 (MQ=255) agagCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAgg > 2:138964/1‑143 (MQ=255) agCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGt < 1:431574/143‑1 (MQ=255) ggAGAATGGAAGATGAGTATGGGGGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGGCCCCTCGCCCCTCTGGGGAGAGGGTTAg < 1:502999/143‑1 (MQ=255) gagaCTGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg < 1:82018/143‑1 (MQ=255) gagaATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg < 1:345169/143‑1 (MQ=255) ggagtGGACGATGAGGATGGGCGATGAGGGTGGGTATGGAGCAGGCATCGCCCCTCACCCCGCTGGGGCAATCCACAAACTGGAGTCCACATGCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 2:584490/139‑1 (MQ=16) agaATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 1:72027/143‑1 (MQ=255) aaTGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCACTGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGCGAGGGTTAggggg > 1:102465/1‑141 (MQ=255) ggAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATCTCGAGCCCACTCGGTCCCCTCGCCCCTCTGGCGAGAGGGTTAGGGTgcag > 1:362471/1‑140 (MQ=39) ggAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgg < 1:355479/143‑1 (MQ=255) gaggAGTAGGGGCGATGGGGTGGGGCATGGAGCAGGCCTCGCCCCTCACCACAATGGGGAGAGGGAGAAAACGGGCGCCATATCCAATATCGAGCACAATCGGTCCCCGCGCGCCTCTGGGGAGAGGGTTAGGGTGAGGGGGc < 2:208360/140‑1 (MQ=37) gaTGGGCGATGAGGTGGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAgcgc < 1:670816/142‑1 (MQ=255) tggcgtaTGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATAGTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAgcgcgc < 1:100399/137‑1 (MQ=255) gggCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGCGCGCAATATTCAATATCGCGCACAATCGGACCCCTCGCCGCTCTGGGGAGAGGGTTGGGGGGAGCGGGGCAGCGCGca > 1:180477/1‑143 (MQ=255) ggCGATGAGGTTGGGTATGGAGCAGGCAGCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGcac < 2:501023/143‑1 (MQ=255) gCGATGAGGTTGGGTATGGAGCAGGGATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGCGGGTTAGGGTGAGGGGGCCAGCGCGcaca > 2:811077/1‑143 (MQ=255) gCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGcaca > 1:251789/1‑143 (MQ=255) gCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGcaca > 1:667891/1‑143 (MQ=255) aTGAGGTTGGGTGTGGGGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTc < 2:71214/143‑1 (MQ=255) aTGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTc < 2:461993/143‑1 (MQ=255) gtcgggTATGGGGGAGGCATCGCCCCTCACCCCAGTGGGGAGAGGGAGCAAACGGGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCctct < 2:166828/140‑1 (MQ=38) gTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGTGGAGAGGGAGACAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGGGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCctct > 1:521003/1‑143 (MQ=255) ggTATGGAGCAGGCATCGCCCCTCCCCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCtcatc < 2:698779/143‑1 (MQ=255) tATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGGGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGCGGGTTAGGGCGAGGGGGCAAGCGCGCACACTCCCTCTCATCAc > 2:647365/1‑143 (MQ=39) tATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCAc > 1:235190/1‑143 (MQ=255) aTGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACg < 1:138964/143‑1 (MQ=255) ggAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTACCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCGCGCCACGcc > 2:116418/1‑143 (MQ=255) gCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCAcc > 1:657958/1‑143 (MQ=255) caggtcgcGCCCCTCGCCCCAGTGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCAccc < 2:780106/136‑1 (MQ=255) gCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCCCATCCCGCCCCCCCac > 2:459307/1‑142 (MQ=255) aTCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGCGGGTTAGGGTGAGGGGGCCAGCGCGCCCCTTCCCTCCCATCACCCCACCCCAAtc > 1:87746/1‑143 (MQ=38) aTCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATACCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGCGAGGGTTAGGGGGAGGGGGCCAGCGCGCACACTCCCTCTCATCACGCCACCCCAAtc > 2:313245/1‑143 (MQ=255) ccTCTCCCCATTGGGGTGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCTGCTCATCACGCCACCCCACTCTccaca > 1:287634/1‑141 (MQ=38) ccTCTCCCCATTGGGGAGAGGGAGAAAACGAGCGCAATACTCAATATCGAGCACAATCGGTCCACTCGACCCTCTGGGGAGAGGGGTCGGGTGAGGGGGCCCGCGCGCCCCTTCCCTCTCACCCCGCCACCCAACTCAccatc > 2:505379/1‑143 (MQ=255) ccTCGCCCCAAGGGGGAGAGGGAGAAAACGAGCGCAATATTCAGTATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTccatc < 2:43739/143‑1 (MQ=255) tCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTccatccc < 2:526463/143‑1 (MQ=255) cACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTccatccca < 2:667505/143‑1 (MQ=255) cccccAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTccatcccat < 1:274503/142‑1 (MQ=255) aCCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCACCCGccagcccat > 2:645359/1‑143 (MQ=255) ccATTGGGGTGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTcc > 1:206337/1‑133 (MQ=255) ccATTGGGGTGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTcc < 2:206337/133‑1 (MQ=255) aaTGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCACTCTCCATCCCATCAAAc > 2:606480/1‑143 (MQ=255) | TGAAGATCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAAC > NC_000913/4314092‑4314374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |