| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 568,268 | IS1 (–) +9 bp | intergenic (+21/‑39) | renD → / → emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 258675 | NA (NA) | 46 (0.960) | 36/284 | 0.3 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 568268 = | 0 (0.000) | intergenic (+21/‑47) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE | |||||
| * | ? | NC_000913 | = 568276 | 0 (0.000) | 46 (0.970) | 40/282 | 0.2 | 100% | intergenic (+29/‑39) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
| ? | NC_000913 | = 1050545 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
CGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCC > NC_000913/1050405‑1050685 | cGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGa > 2:117211/1‑143 (MQ=17) ggTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAc < 2:526039/143‑1 (MQ=32) tataACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACACAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACaa < 1:494021/143‑1 (MQ=14) cTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGCACATAAAACACCATCAATAAGTTGGAGGCATTACCGACAAtacgtg > 2:464778/1‑142 (MQ=255) cTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGCGACATGACCgacagtttgaa < 1:24793‑M2/143‑12 (MQ=255) cTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaa < 1:159047‑M2/143‑12 (MQ=255) cTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAtacgta > 1:411595/1‑143 (MQ=35) tGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaac > 1:543645‑M2/1‑131 (MQ=255) tCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaa < 1:99822‑M2/143‑17 (MQ=255) tCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCAATATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAGACGTACGCtt > 2:365348/1‑143 (MQ=255) cTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTg > 2:283682/1‑143 (MQ=40) gAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCCTCGGGCATTATCCGAACCTAAAACACTATCAACAAGTTGGAGTCATTACCGACAATACGCACGCTTgcc > 2:90583/1‑141 (MQ=11) gAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactc < 1:684317‑M2/143‑20 (MQ=255) aGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGGTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGCACGCTTgaga > 2:66678/1‑143 (MQ=255) cagcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCa > 2:453490/1‑143 (MQ=255) caCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAGAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGACATTACCGAAAATACGGACGCTTGAGGTCAGGa > 1:98628/1‑143 (MQ=14) aCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCCATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgttt > 1:25557‑M2/1‑116 (MQ=255) ggCACGGCTGGGACGGACGTCGCTGCCGTTCCCAAAATCGGTGGAGCTGCATGACAACGTCATCGGGCATTATCTGAACATAAAACACCCTCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTc < 1:11665/143‑1 (MQ=17) cACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTa > 2:265762/1‑143 (MQ=255) ccgGCTGCGACGGAAGTCGCTGTCGTTCTCAAAACCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgattcatcatt > 2:827636‑M2/2‑109 (MQ=255) cGGCTGGGACGGAGGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAGAGTCATCGGGCATTATGTGAGCATACAACACTATCACTACGTTGGAGTCAGTACCtgcggtttgaactcaactgacctgtttcatcattg > 2:80894‑M2/1‑108 (MQ=255) ggCGGGGACGGACGTCGCTCTCGTTCTGAAAATCGGTGGAGCTGCCTGACAAAGTCATCGGGCATTATCTGTACATAAAACCCTATCAATAAGTTTGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgt > 2:433501‑M2/1‑107 (MQ=255) gCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgttccatcactgtc < 2:232735‑M2/143‑38 (MQ=255) ggAAGTCGCTGTCGTTCTCAAAATCTGTGTTGCTTCATGACATAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccatt > 1:763356‑M2/1‑98 (MQ=255) ggAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACTCTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccatt > 1:218000‑M2/1‑98 (MQ=255) aGTCGCTGTCGTTCTCACAATCGGTGTCGCTGCATGACAAAGTCATCGCGCATTATCTGAACATAAAACACTATCAATACGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgat > 2:492634‑M2/1‑95 (MQ=255) aGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgat < 1:745220‑M2/143‑49 (MQ=255) gCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAACACCCTTTCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCtt < 1:397172/143‑1 (MQ=255) cTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGCAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTtg > 1:335584/1‑143 (MQ=255) tGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccatcgatgttctt > 2:546020‑M2/1‑89 (MQ=255) tGTCGTCGTCACAATCGGGGGAGCGGCATGACACAGGCATCGGGCATTATCTGAACACAAAACACTAGCGAGAAGTTGGAGTCATTCCCGACAATACCTCCGGTTGGGATCAGGATTGTCTACTTTGAGTATAACATCCTtgt < 2:262417/143‑1 (MQ=18) ggtttttCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTtgt < 2:505818/138‑1 (MQ=255) gTCGTTCTCAAAATTGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAGCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTtgtg < 2:262471/143‑1 (MQ=255) gTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttt > 2:537913‑M2/1‑88 (MQ=255) gTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttt > 2:537390‑M2/1‑88 (MQ=255) tCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTCTCAAAACGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttctttt < 1:772326‑M2/143‑57 (MQ=255) gTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGaaa > 2:39496/1‑143 (MQ=255) tctcAAAATCGGTGGGGCTGCATGACAAGTTCATCGGGCATTATCTGAACAGTAAACACTATCAATATGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAAtc < 1:178189/143‑1 (MQ=25) tcAAAATCGGTGGAGCTGCATGACAACGTCATCGGCCATTATCTGACCATAAAAAACTGTCACTAAGTTGTAGTCATTACCGACAATACTTACGCTTGAGATCACGATCGTCTCCTTTGAGTATCACATCCTGGTGAAAtctc > 2:109483/1‑143 (MQ=18) tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatatac > 2:745220‑M2/1‑81 (MQ=255) tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatatac < 1:149691‑M2/143‑63 (MQ=255) tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAAtctc > 1:561220/1‑143 (MQ=255) tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGATGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcatcgtgttaccattcatgttcttctatatcc < 2:733112‑M2/143‑63 (MQ=255) aaaaTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATACGTTGCAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccatttatctccttttatataccg < 1:684295‑M2/143‑65 (MQ=255) aaaaTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTccc > 1:730460/1‑143 (MQ=255) aaaTCGGTGGAGCTGCATGACAACGTCATCGGGCATTATCTGAACATAACACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgctcccattgatgctcttttatacacact < 2:80879‑M2/143‑66 (MQ=255) aTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATCACCGACAATACGTACGCTTGAGATCAGGATTGTCCACTTTGAGTATAACATCCTTAGGAAATCTCCCttt > 2:29004/1‑143 (MQ=255) aGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgt > 2:756771‑M2/1‑68 (MQ=255) aGCTGCATGACAAAATCATGGGTTATTATGTGAACATAAAACATTATTAATAAGTGGGAGTCATTACCtacagtttgaactcaactcatctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgt > 2:642712‑M2/1‑68 (MQ=255) gCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCAtctc > 1:636988/1‑140 (MQ=255) cTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcaaaggaaggtcacagttgttcttctatctaccctcaatacccgttt < 2:835846‑M2/143‑78 (MQ=255) cTGCATGACAAAGGCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgttt > 2:5119‑M2/1‑66 (MQ=255) ggcATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttc > 1:10968‑M2/2‑65 (MQ=255) cATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCtt > 1:171700/1‑143 (MQ=255) gACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCa < 1:283682/143‑1 (MQ=255) gACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCa < 2:11814/143‑1 (MQ=255) aCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgctcccattgatgttcttttatataccctcaatacccgtttcatcgcg > 2:812218‑M2/1‑59 (MQ=255) cAAAGTCATAGGACATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACt < 1:636118/143‑1 (MQ=255) aaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACtat < 2:76811/143‑1 (MQ=255) aGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcac > 1:600998‑M2/1‑55 (MQ=255) gcgGGCACTATGTGAACATAAAACACTATCAATCAGTCTGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctgg > 2:544852‑M2/2‑50 (MQ=255) ggCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatatacgctcaatacccgtttcatggcggcgctctggcga < 1:40792‑M2/143‑97 (MQ=255) cATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgaca < 2:419204‑M2/143‑99 (MQ=255) aTTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgacac > 2:70425‑M2/1‑44 (MQ=255) tGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgacactcctta < 2:628378‑M2/143‑106 (MQ=255) aCATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgacactccttaaaa > 2:770504‑M2/1‑35 (MQ=255) cATAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgacactccttaaaaa > 2:475585‑M2/1‑34 (MQ=255) aTAAAACACTATCAATAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccatttatgttcttttatataccctcaatacccgtctcattgcgccactcttgcatccctccttaaaact < 2:465187‑M2/143‑111 (MQ=255) aTAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCGCATACCGCTTGCACTATATACTGCGGGTAGGAAAGgcgcg < 1:518942/143‑1 (MQ=255) aaaaCACGATCAATAGGTTGGATTCATGACCtacagtttgaactcaacgcacctgtttcatcattgtgttcccagtgatgttctttcatataccctcaatacccgtttcatcgcggcactctggcgacactccttaaaaatca > 2:290727‑M2/1‑31 (MQ=255) aTCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGaaa < 2:809436/143‑1 (MQ=255) aaTACGCTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAatat < 1:464778/143‑1 (MQ=255) aTAAGTTGGAGTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgacactccttaaaaatcagattcgtgcccc < 2:20244‑M2/143‑125 (MQ=255) aTAAGTTGGAGTCATTACCGACAATACGTACGCCTGAGATCAGGATGGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAAtata < 1:66678/143‑1 (MQ=255) aGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGa < 2:192729/143‑1 (MQ=255) gTCATTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgacactccttaaaaatcagattcgtgctcacctttccttc > 2:24793‑M2/1‑9 (MQ=255) gTCATTACCtacagtttgaactcaactcacctgtttcatcagtgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcagtctggcggcactccttaaaaatcagattcgtgctcacctttccttc > 1:591996‑M2/1‑9 (MQ=255) aTTACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgacactccttaaaaatcagattcgtgctcacctttccttccca < 1:134711‑M2/143‑138 (MQ=255) aTTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTCCGGGAAGGAAACGCGCGCAGAGGGAACTACCACATTGTTaccca > 2:785724/1‑139 (MQ=255) ttACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcactacccgcttcatcgcggcactctggcgacactccttaaaaatcagattcgtgctcacctttccttcccat > 2:227499‑M2/1‑5 (MQ=255) ttACCtacagtttgaactcaactcacctgtttcatcattgtgttcccattgatgttcttttatataccctcaatacccgtttcatcgcggcactctggcgacactccttaaaaatcagattcgtgctcacctttccttcccat < 1:807233‑M2/143‑139 (MQ=255) tACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAAGCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATc < 1:548414/143‑1 (MQ=255) aCCtacagttttaactcgtcacgtctgtttcatctttgttctcccattcatgttcttttatctaccctcaatatccgtttcatcgcggcactctggcgacactccttaaaaatcagattcgtgctcacctttccttcccattc > 2:662949‑M2/1‑3 (MQ=255) aCCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGCAGGAAAGGCGCGCAGAGGGAACTATAAGATAGTTGACTATcc > 2:457631/1‑143 (MQ=255) | CGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCC > NC_000913/1050405‑1050685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |