Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,934,900 | C→T | G472E (GGA→GAA) | zwf ← | NADP(+)‑dependent glucose‑6‑phosphate dehydrogenase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,934,900 | 0 | C | T | 94.7% | 102.9 / NA | 38 | G472E (GGA→GAA) | zwf | NADP(+)‑dependent glucose‑6‑phosphate dehydrogenase |
Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (18/18); total (19/19) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACGCATGGTTTCCA > NC_000913/1934760‑1935038 | cTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTtcc < 1:712043/143‑1 (MQ=255) tGAAAGTGTAAAAGTTGTGCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTtccc < 1:76394/143‑1 (MQ=255) aaaGTGTAAAAATTGTTCTACAATCTGCGCAAGAGCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATCCCAGGAACGACCATCACGGGTAATCATCGCCACCGACCCACCGGGCCCCCac > 2:306004/1‑142 (MQ=255) gtAAAAATTGTTCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCCACGGGGTGCCGGGTTcc > 1:320799/1‑143 (MQ=255) tcaagaTTGTTCTCCAATCTGCTCAAGATCATGTTACC‑GGTAAATTAACCATAAAGGATAAGCGCAGATATTACGCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCg < 2:67839/138‑1 (MQ=255) aaaaaTGGTTCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCgg < 1:389045/143‑1 (MQ=255) aaaaTTGTTCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGCATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTACTCAACGCCACCGAGTCACCGGGATCCCACGCACCGGc > 2:312164/1‑143 (MQ=255) ctGTTCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCCTAACGGCTAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGa < 1:194419/142‑1 (MQ=255) tggtCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAGTCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGAt > 1:554978/4‑143 (MQ=255) tACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGt > 1:749531/1‑143 (MQ=255) tACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGt > 1:355251/1‑143 (MQ=255) tgaagcTGCGGAAGATC‑TGTTTCCTGGTATAATTAGTATGAAGGATAAGCGCAGATATTACTCACACTCATTCCATGAACGACGATCACGTGTAATGATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGtt < 2:565960/138‑1 (MQ=255) aTCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCg > 1:572127/1‑143 (MQ=255) cgcAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGGTGCGGTTTCGGCGca > 1:87097/1‑143 (MQ=255) aTCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGGTATTACTCAAACTCATTCCAGGAACGACCTTCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTg < 2:394653/143‑1 (MQ=255) tcctGTTACG‑GGTAAAATAACGATAAAGGATATGCGCAGATATTGCTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATTCGGTTTCGGCGCATCA‑TTGt < 2:763482/140‑1 (MQ=255) tCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGt < 1:465638/143‑1 (MQ=255) tCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCACGTTCCGGCCTGCTACGGTTTCGGCGCATCA‑TTGt > 1:658834/1‑143 (MQ=255) aCCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCCTCGCCGACGCCTCAGt > 1:647539/1‑143 (MQ=255) aCCACAAGGGAGACGCTCAGAGATTACTCAAGCTCATGCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGTAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGt < 1:361801/143‑1 (MQ=255) cATAAAGGATAAGCGCAGATAGTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGGTCCCAGGTTCCGGCCTGATGCGGTTTCGGCGCAGCA‑TTGTCCATCGCCCACGCCTCAGTaa > 1:843241/1‑143 (MQ=255) aTAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAAt < 2:749531/143‑1 (MQ=255) tAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATg > 1:625714/1‑143 (MQ=255) tAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCCGATACGGTTTCGGCGCCTCA‑TTCTTCCCCGCCACCGCCTCAGTAAtc > 1:115537/1‑142 (MQ=255) cAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTGGGCGCATCA‑CTGTCCATGGCCTACGCCTCAGTCATCGAGTGTGCCCAtt > 1:352293/1‑143 (MQ=255) tatTACTCAAACTCATTCCAGGAACAACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCa < 1:155236/143‑1 (MQ=255) tagtACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCGTCGGCGCCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCa < 1:716476/140‑1 (MQ=255) cTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCCCGTCTCCGTAATGGAGTCTACCCATTTCCAGGctt > 1:356530/1‑143 (MQ=255) cAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTGATGGAGTCTCCCCCTTCTCAGtcttct > 1:130707/1‑143 (MQ=255) aaaCTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGcttctt > 1:793441/1‑143 (MQ=255) gACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGt < 1:658254/143‑1 (MQ=255) cATCACGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACa < 1:377089/143‑1 (MQ=255) aCGGGTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACa > 1:585357/1‑143 (MQ=255) ggTAATCATCGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTg < 1:676564/143‑1 (MQ=255) gaaTCACCGCCACCGAGGCACCGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCAATTCCAGTCTTCTTCCACTTCGTCGCGACGTACAAACAGTGcc < 2:843241/142‑1 (MQ=255) tcatcGCCACCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGCTTTACG‑GACTCAGCTCTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGa < 1:856082/143‑1 (MQ=255) cGCCACCGCGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGCTCCCGCGCCTCA‑TCGTCCTTCGTGCACCACTCAGTCACTGCCTCGACCGATGTCCAGGCTTCTTCCAGTTCGTCGCGACGTACAAACAGTGCCTGAATAc < 2:381807/143‑1 (MQ=255) aCCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACg < 1:605358/143‑1 (MQ=255) aCCGAGGCAACGGGTTCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACg > 1:454332/1‑143 (MQ=255) gcgTCCTCATGTTCCGGCCTGATACGCTTTCGTCTCCTCA‑TTGTCCATCGCCCAAGCAACAGTAAGGGATTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACGCATGGTTTCca < 2:516198/141‑1 (MQ=255) | CTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTACC‑GGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCA‑TTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACGCATGGTTTCCA > NC_000913/1934760‑1935038 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |