| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,446,362 | Δ1 bp | 7.6% | intergenic (+156/+16) | ydbL → / ← feaR | DUF1318 domain‑containing protein YdbL/DNA‑binding transcriptional activator FeaR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,446,362 | 0 | A | . | 7.6% | 274.5 / 17.0 | 92 | intergenic (+156/+16) | ydbL/feaR | DUF1318 domain‑containing protein YdbL/DNA‑binding transcriptional activator FeaR |
| Reads supporting (aligned to +/- strand): ref base A (47/37); new base . (3/4); total (50/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.36e-01 | |||||||||||
ATATCGGGATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGAAAGCCGATGCCTGCCAGTTTTTCATCATCTG > NC_000913/1446220‑1446502 | atatGGTGATAACGCTACAGTAGAAGGAGAGTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGGCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACa < 1:334653/143‑1 (MQ=255)acagcGGGATAACGCTACAGGAGAAGGCGAGTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGGCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACa < 1:221875/139‑1 (MQ=255) tCGGGATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGc > 1:561417/1‑143 (MQ=255) cGGGATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATAGCTGTTTTAACTAATTGGCGTTGCC‑GTACATGCa > 1:458127/1‑143 (MQ=255) gtgATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCaa < 2:163554/141‑1 (MQ=255) gggATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCaa < 2:258216/143‑1 (MQ=255) gggATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCaa > 1:862680/1‑143 (MQ=255) gggATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCaa < 2:649794/143‑1 (MQ=255) ggATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTATTGCCCTGAAAAAAGGATCATCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACAAGCAAc > 2:693313/1‑143 (MQ=255) gATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTAC‑TGCAACg < 2:725816/143‑1 (MQ=255) gATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACg < 1:896039/143‑1 (MQ=255) gATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACg < 1:899310/143‑1 (MQ=255) aTAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTAC‑TGCAACGc < 2:534025/143‑1 (MQ=255) tAACGCTGCAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACGCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTAC‑TGCAACGcc < 2:669579/143‑1 (MQ=255) cGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTCTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCC‑At > 2:1061328/1‑143 (MQ=255) tACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑Attag > 1:259833/1‑143 (MQ=255) ggAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑Attagttag > 2:91695/1‑143 (MQ=255) agaAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTAC‑TGCAACGCCA‑Attagttaaaa < 1:425162/143‑4 (MQ=255) gaAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCgg > 2:487381/1‑143 (MQ=255) aGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGaa < 1:6601/143‑1 (MQ=255) ggCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGact > 1:985412/1‑141 (MQ=255) cGATTGCTCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAAttt < 2:518584/143‑1 (MQ=255) cGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAAttt < 1:354070/143‑1 (MQ=255) aTTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTAc > 2:992825/1‑143 (MQ=255) ttGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCACCGCCA‑ATTACTTAGCGGAATTTACg > 2:447993/1‑143 (MQ=255) ttGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACg > 1:1035995/1‑143 (MQ=255) tCTATTTTCCTGAAACAAGGTGAATATTCAGGAACGCCTGTCAAATTGCCTTTTGCCCGGAAAAATGCATAGGCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGa < 2:1028156/143‑1 (MQ=255) tCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGACGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGa > 2:949041/1‑143 (MQ=255) tATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATa > 1:747347/1‑143 (MQ=255) aTTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTCGTTAGCGGAATTTACGTCGAtcc > 1:232792/1‑141 (MQ=255) ttCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGTGTTGAT‑GTCGAAGCAACACCA‑CTTGGGTAGCAGAATTTACGTCGATACTCg > 1:769181/1‑143 (MQ=255) ttCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTCAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCg > 1:533950/1‑143 (MQ=255) cggAAACGAGGGGAATATGCAAAGACTCCTTTAAAATTGCCTTTTGCCCATAAGAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTTCA‑GTACATACAACTCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCt < 2:581252/141‑1 (MQ=255) cTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCt < 1:84802/143‑1 (MQ=255) tGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAACTGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTCCATGCAACGCCC‑ACTAGTTAGCGGAATTTACGTCGATACTCGCCTg > 1:161191/1‑143 (MQ=255) tGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTg > 2:26874/1‑143 (MQ=255) aaaCAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGc < 1:562536/143‑1 (MQ=255) aCAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGt > 2:173549/1‑143 (MQ=255) aGGTGTATATTCAAGACCTCCTGGCAAATTGCCTTTTGCTCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCAt < 2:942234/143‑1 (MQ=255) ggTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATc < 1:407527/143‑1 (MQ=255) tGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCCACGCCA‑ATTAGTTAGCGGAAGTTACGTCGATACGCGCCTCGCGACATccc > 2:586771/1‑143 (MQ=255) tGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATccc > 1:605594/1‑143 (MQ=255) gAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCa > 1:743978/1‑143 (MQ=255) atatTCAAAATCTCGTGTGAACTTGGCTTGTGCCGTTAAAAATGGATAGTGAAATATCTGTTTTAACTAATGTGCGTGGCA‑GTACATGCAACGACACACACCGTATTGG‑AGGTACGTCGATACTCGCCTGGCGTCATCCCaaa < 2:227730/143‑1 (MQ=255) cAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGGCTGGCGTTCGCTCAAAGCGtt > 2:629617/1‑143 (MQ=255) cAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGtt > 2:102472/1‑143 (MQ=255) aaaatcccTGTCAAAGTGCCTTTTGCCCTGAAAAATGCATACTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCCACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc < 1:282880/137‑1 (MQ=255) aaaaCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc < 1:992825/143‑1 (MQ=255) aaaaCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATACAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc > 1:534017/1‑143 (MQ=255) aaCTCCTGTCAACTTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCtt < 1:18799/143‑1 (MQ=255) tGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATAc > 1:704718/1‑143 (MQ=255) gTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATAcc > 2:785113/1‑143 (MQ=255) ggaaaTTGCATTTTGCGCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCg < 1:1065955/141‑1 (MQ=255) atgttGCCTGTGGCTCTGTACAATGGCTAGTCAAGTATCTGTTTTAACTAAGTGGCGTTGCA‑GTACATGTAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGtt < 2:505802/140‑1 (MQ=255) ccTTTGGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑TTACATGCAACGCCA‑ATTAGTTAGCGCAATTTACGTCGATACTCGCCTGGCGGCATCCCAAAGCGTTGCTTAAATACCGTTGaaaaa < 1:342025/143‑1 (MQ=255) ctgttGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAAt < 1:379907/140‑1 (MQ=255) cTTTTGCCCTTAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCCACGCCA‑AGTGTTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAAt < 2:126424/143‑1 (MQ=255) ccTGACAAATGCATAGTCAAATAGCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACTCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTg < 2:521546/143‑1 (MQ=255) ccTGAAAAATTCATAGTCAAATATCGGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCAGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTg < 2:23184/143‑1 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTACATACCGTTGAAAAATGAccacg > 2:697435/1‑139 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAACTACCGTTGAAAAATGACTCTg > 1:345208/1‑143 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTg < 1:988393/143‑1 (MQ=255) cTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAACTGACTCTgg > 1:905686/1‑143 (MQ=255) tGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTCAATACCGTTGAAAAATGACTCTggc > 1:958097/1‑142 (MQ=255) aaggCATAGCCAAACAGCTGTTTTAACTAATTGTCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGaa < 1:155214/140‑1 (MQ=255) gCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGACA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTCAATACCGTTGAAGAATGACTCTGGTCAGAAAAt > 2:957846/1‑143 (MQ=255) atagagaaaTATACGTTTGAACTAATGGGCATTGCA‑GTACAGGCANCGCCA‑ATTAGTTAGCGGAATTTACGTCGANACTTGCCTGGCGTCATCCNAAAGCGNTGCTTANATACCGTTGAAAAATGACTCTGGTCAGAAAATcc < 2:658032/137‑1 (MQ=255) aaaggcAAATATCGAGTTGAACTAAGTGGCGTTGCA‑CTACATCCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTACCTACCGGTGAAAAATGACTCTGGTCAGAAAATcc < 2:1041755/138‑1 (MQ=255) aTAGTCAACTATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATcc < 1:235226/143‑1 (MQ=255) tAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTTGGGTGGTCACACCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATccc < 2:1035995/143‑1 (MQ=255) tAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATccc < 1:425511/143‑1 (MQ=255) gTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGACGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAATCTGGTCAGAAAATccccc > 2:105585/1‑142 (MQ=255) tCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑CTTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAACTGACTCTGGTGGGAAACTCACCaa > 2:1057965/1‑143 (MQ=255) tCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCTTCACCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGACAATACCCaa > 2:123107/1‑143 (MQ=255) tCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAGATGACTCTGGTCAGAAAATCCCCac > 2:417244/1‑142 (MQ=255) tCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCaa < 2:492386/143‑1 (MQ=255) tCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCaa > 1:598942/1‑143 (MQ=255) cAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAAt < 1:15310/143‑1 (MQ=255) tatCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGaaa < 1:378299/143‑1 (MQ=255) ttgaaCTAGTTGCCGTTCCA‑GTCCCTGCACCGCCA‑GTTAGTTAGCGGAATTTACGTCGATCCTCGCCTGGCGTCTTCCCAAAGCTTTGCTTACATACCGTTGAAAAATGACTCTGGTCAGAAAACCCCCAATGAAAGCCGAtg < 2:331180/140‑1 (MQ=255) tAACTAATTGGCGTTGCATGTAC‑TGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGAAAGCCGAtccc > 2:537125/1‑143 (MQ=255) tAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTCAATACCGTTGAAAAATGACTCTGGTCAGACAATCCCCAATGAAAGCCGAtgcc > 2:929177/1‑143 (MQ=255) aCTAATTGGCGTTGCATGTAC‑TGCAACGCCA‑ATTAGTTAGCGGATTTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTCAATCCCGTTGAAAAATGACCCTGGTCAGAAAATCCCCAATGAAAGCCGAtgcctg > 2:428256/1‑143 (MQ=38) cTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGAAAGCCGAtgcctgc > 1:225737/1‑143 (MQ=255) aTTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGCTCCTTAAATACCGTTGAACAATGACTCTGGTCCGAAAACCCCCCATGAACGCCGCtgcccgcccg > 2:802205/1‑141 (MQ=255) ttGGCGTTGCATGTAC‑TGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGAAAGCCGATGCCTGCCAGt > 1:110899/1‑143 (MQ=255) ggCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGATTCTGGTCAGAAAATCCCCAATGAAAGCCGATGCCTGCCAGttt < 1:173549/143‑1 (MQ=255) gCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGAAAGCCGATGCCTGCCAGtttt > 1:208905/1‑143 (MQ=255) ttGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTCCGTCGATACTCGTCTGGCGACATCCCACAGCGTTGCCTAAATACCCTTGAAAAATGACCCTGGCCAGAAAATGCACAATCAAAACCGATTCCTCCGAGTTATtca > 2:88703/1‑143 (MQ=255) gCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTCGTCAGAAAATCCCCAATGAAAGCCGATGCATGCCAGTTCatcatc > 2:857368/1‑143 (MQ=255) cA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAACATCCCCAATGAAAGCCGATGCCTGCCAGCTTTtcacca > 2:1048085/1‑143 (MQ=255) cA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGAAAGCCGATGCCTGCCAGTTTTtcatca > 2:697254/1‑143 (MQ=255) gTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGAAAGCGGATCACGGCCACTTCTTCatcctc > 2:5982/1‑143 (MQ=255) aCATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGCTACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAGTACCGTTGAAAAATGCCTCTGGTCAGAAAATCCCCAATGAAAGCCGATGCCTGCCAGTTTTTCATCATCTg < 2:437313/143‑1 (MQ=255) | ATATCGGGATAACGCTACAGGAGAAGGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCA‑ATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAATCCCCAATGAAAGCCGATGCCTGCCAGTTTTTCATCATCTG > NC_000913/1446220‑1446502 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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |