New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1514036	33 (0.600)	3 (0.060)	3/250	NT	8.2%	coding (206/942 nt)	ydcU	putative ABC transporter membrane subunit YdcU
	?	NC_000913	= 1514069	36 (0.690)					coding (239/942 nt)	ydcU	putative ABC transporter membrane subunit YdcU

ATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTGGTATATGGCGCGCTATA  >  NC_000913/1513898‑1514176                                                                                                                                             |                                                                                                                                             aTAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATGTCACCATGTCGGTAA‑‑CGCCGGaagtt                                                                                                                                          >  2:237487/1‑140 (MQ=255) aTAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGACACGCTAATGTGGTTTGGCATTGTCTATTTCTTCTCACTGCTAACAATGTTATGGCAGGGATTTTATACTTTTGACGATTTCAACATGTTGGTAA‑‑CGCTGGAACTg                                                                                                                                          >  2:755487/1‑143 (MQ=255)   aaTCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCCGGTCGGTAA‑‑CGCCGGAACTGAc                                                                                                                                        >  2:416216/1‑143 (MQ=255)       cGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTATATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGGTTTCACCATGTCGGTAA‑‑CGCCGGAGCTGACGGTg                                                                                                                                    >  1:556113/1‑143 (MQ=255)                   tgTTTTTACTGCTGCTTGGCCCGCTAATGTTGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGt                                                                                                                        <  2:84425/143‑1 (MQ=255)                   tgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGt                                                                                                                        <  2:494218/143‑1 (MQ=255)                    gTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTg                                                                                                                       >  1:892475/1‑143 (MQ=255)                          gcagctgctTGGCCCGCTCGTGTGGCTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTCA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGt                                                                                                                 <  2:271271/140‑1 (MQ=255)                                 cTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGCATATCCGTGCGCTGTTTAAtcc                                                                                                          <  1:370391‑M2/143‑4 (MQ=255)                                              tgtgGTTTGGCGTTGTTCTTTTCATCTCGCCGCAGAAATTTTTTTGGCAGTTATTTTATACTTTGGACTTTCTTTCCATTTCGGTAT‑‑CTCCTTAACTGACGCTGGCGAATATCTGTGCGCTGTTTTATCCGGCGAATTACGAc                                                                                             <  2:858151/143‑1 (MQ=255)                                                 gggttggcGTGGTCTATTGCCGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGGCGATTCAACCATGTC‑GTAATTCGCCGGAttaaacagcgcacggatattcgccagcgtcagttccggcgttaccgacatg                                                                                           <  2:14398‑M1/140‑52 (MQ=255)                                                          ttGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCCGGGCTTTGAGAAGGTTGAGGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGc                                                                                 >  1:546992/1‑143 (MQ=255)                                                          ttGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGCATATCCGTGCGCTGTTTAATCCGGCGACTTACGACATGATTCTCCGc                                                                                 >  2:870939/1‑143 (MQ=255)                                                           tGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CCCCAGCAAAGACAGTGGCGAATATCCGTGCGCGGTTTAATCCGGCGAATTACGACATCATTCTCCGCa                                                                                >  1:243271/1‑143 (MQ=255)                                                            gTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCAc                                                                               <  1:116121/143‑1 (MQ=255)                                                              cTATTTCGGCTCGCTGCCGACAATGTTATGGCAGGGATTTTATACTTGTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGc                                                                             <  2:892475/143‑1 (MQ=255)                                                               tctttCGCCCCGCTGCTGCCCCTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATAGCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCt                                                                            <  2:590687/141‑1 (MQ=255)                                                                         cGCTGCTGACACTGTTATCGCAGGGATTTTATACTTTTGACGACTTCTCCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTTCGCTGTGTAATCCGGTGAATTACGACATCATTCTCCGCACGCTGACTATGGCt                                                                  <  1:270518/143‑1 (MQ=255)                                                                          gctgctGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGATAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGACTAACGACATCATTCTACGCACGCTGACTATGGCtg                                                                 >  2:314885/1‑143 (MQ=255)                                                                             gctgACACTGTTATGGCATGAAGTTTCTACTTTTGCCGCTGTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTgg                                                              <  2:739106/143‑1 (MQ=255)                                                                                     tGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATAATTCTCCGCACGCGGCCTATGGCTGTGACCGTCCCt                                                      >  2:240106/1‑143 (MQ=255)                                                                                           ggCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCGGTCACCATcccc                                                >  2:755963/1‑143 (MQ=255)                                                                                             cAGGGATTTTCTACCTTTGTCTATTTCACCATGTCGTTAA‑‑CGCCGGAACTGACGCTCGCGAATATCCGTGCGCTGTTTAATCTGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAg                                              <  2:422709/143‑1 (MQ=255)                                                                                             cAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAttaaacagcgcacggatattcgccagcgtcagttc                                                                                                           <  2:773311‑M1/82‑36 (MQ=255)                                                                                             cAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAttaaacagcgcacggatattcgccagcgtcagttc                                                                                                           >  1:773311‑M1/1‑47 (MQ=255)                                                                                                 gATGTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGcc                                          <  2:110232/143‑1 (MQ=255)                                                                                                      tttaCTTTTGACGATTTTCTCATGTCGGTAA‑‑CGCGGGAACTGACGCTGGCTAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCTCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCt                                     <  2:220895/141‑1 (MQ=255)                                                                                                         actcgtGACGATTGCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGc                                  <  1:43946/138‑1 (MQ=255)                                                                                                           ttttGAGGATTTCACCATGTCGGTCA‑‑CGCCGGAACTGACGCTGGCGACTATCCGTGCGCTGTTTATTATAGTGAGGTTCAAAATGTGTTTTCTGACGCTGACTATGGCTGTGGCAGGCACTATCGCCAGCGCCATTCTGGCtt                                <  2:754215/143‑1 (MQ=255)                                                                                                             ttGTCGATTTCACCATGTCGGTAT‑‑CGCCGGAGCGGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCtttt                              <  2:315423/143‑1 (MQ=255)                                                                                                             ttGACGCTCTCTCCCTGTCGGTAA‑‑CGCCGTAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCtttt                              <  1:846376/143‑1 (MQ=255)                                                                                                             ttGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTGGGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCtttt                              >  2:1031609/1‑143 (MQ=255)                                                                                                                aCGATTCAACGATGTCGTTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCa                           <  2:611948/143‑1 (MQ=255)                                                                                                                        cgcATGTCGGTAA‑‑CGGCGGAGCTGTCGGTGGTGTATATATGTGGGTTGTTTGTTCAGGCGGATTGCGGCATTGTTATCCGCACGTTGTCTATGGCTGTGGCGGTAGGTTTCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTg                   <  2:375891/141‑1 (MQ=255)                                                                                                                        aCCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTg                   <  1:875651/143‑1 (MQ=255)                                                                                                                          cATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAAtccggcgaattacgacatggttgaatcgccaaaagtataaaatccctgccataacagtgtcagcagcgagcggcaatagaccacgccaaccc                 <  2:14398‑M2/143‑93 (MQ=255)                                                                                                                             gTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTGGtata              >  2:393116/1‑143 (MQ=255)                                                                                                                               cGGTAA‑‑CGCCGGAACTGACGCTGGCGCATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTGGTATATg            >  1:730932/1‑143 (MQ=255)                                                                                                                                ggTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATACTCCGCATGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTGGTATATgg           >  2:320164/1‑143 (MQ=255)                                                                                                                                       cGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCTCGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTGGTATATGgcgcgc      <  2:626919/143‑1 (MQ=255)                                                                                                                                           ggAttaaacagcgcacggatatgcgccagcgtcagttccggcgttaccgacatggtgaaatcgtcaaaagtataaaatccctgccataacagtgtcagcagcgagccgaaatagacaatgccaaaccacattagcgggccaag  <  1:370391‑M1/143‑141 (MQ=255)                                                                                                                                            gAACTGACGCTGGCGAATATCCGTGCGCTGTTTAAtccggcgttaccgacatggtgaaatcgtcaaaagtataaaatccctg                                                              >  1:773311‑M2/1‑35 (MQ=255)                                                                                                                                            gAACTGACGCTGGCGAATATCCGTGCGCTGTTTAAtccggcgttaccgacatggtgaaatcgtcaaaagtataaaatccctg                                                              <  2:773311‑M2/82‑48 (MQ=255)                                                                                                                                             |                                                                                                                                             ATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAA‑‑CGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTGGTATATGGCGCGCTATA  >  NC_000913/1513898‑1514176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.