New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4053578 =NA (NA)3 (0.060) 3/250 NT NA noncoding (1/37 nt) other REP294b
?NC_000913 4053609 = NA (NA)noncoding (32/37 nt) other REP294b

Only 100 of 144 total aligned reads displayed.

ATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCGATACCAGATTAATTATTGATTC  >  NC_000913/4053467‑4053751
                                                                                                                                              |                                                                                                                                              
agttgcccgccgcacagcgcaaactgccgttgctgccgtgctgtgtgccgcaatgattgggctgtttagctgaagctcgttgtttatgccggatgcggagaaagtcgtaggcctgataagacgcgaccagcgccgcatcaggc                                                                                                                                                <  1:656484‑M2/1‑1 (MQ=255)
agttgacagccacacaccgcaaactgccgttgcggccgtgctgtgtgccgcaatgagtgggctgtttagctgaagctcgttgtttatgccggatgcggagaaagtcgtaggcctgataagacgcgaccagcgccgcatcaggc                                                                                                                                                <  2:163722‑M2/1‑1 (MQ=255)
    gCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTAc                                                                                                                                            >  1:1013975/1‑143 (MQ=255)
     cTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTAATCAGGCCTACg                                                                                                                                           >  2:596640/1‑143 (MQ=255)
      tGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGa                                                                                                                                          >  2:514000/1‑143 (MQ=255)
       gagaACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGAc                                                                                                                                         >  1:208269/1‑143 (MQ=255)
        agaACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACt                                                                                                                                        >  1:925970/1‑143 (MQ=255)
        agaACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACt                                                                                                                                        <  1:469292/143‑1 (MQ=255)
          aaCAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACttt                                                                                                                                      <  2:385480/143‑1 (MQ=255)
          aaCAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGGTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACttt                                                                                                                                      <  2:577978/143‑1 (MQ=255)
           aCAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTGGAAATTATTGCTTTTGTAGGCCGGACAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTtc                                                                                                                                     <  1:537587/143‑1 (MQ=255)
             acgATTGCCTGAGGCGCTGGGCAACAAAAACTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTTGCGTCTTATCAGGCCTACGACTTtctc                                                                                                                                   <  1:80667/141‑1 (MQ=255)
             aaGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTtctc                                                                                                                                   >  1:363838/1‑143 (MQ=255)
             aaGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTtctc                                                                                                                                   <  2:35745/143‑1 (MQ=255)
                 ttGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCa                                                                                                                               >  1:494325/1‑143 (MQ=255)
                    ccTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTCCGACTTTCTCCGCATcc                                                                                                                            >  2:450217/1‑143 (MQ=255)
                      tGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGccagcgg                                                                                                                          >  2:623512/1‑137 (MQ=255)
                      tGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTCATCAGGCCTACGACTTTCTCCGCATCCgg                                                                                                                          >  2:702259/1‑143 (MQ=255)
                      ggtcgcgcTGGGCATCAAAGCCTGTGTAAGATCTTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGATCATGAGGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCgg                                                                                                                          <  2:149503/139‑1 (MQ=25)
                           cgcTGGGCAACAACGCCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGTCGCATCAGGCATCTGAGCATGATGGCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATaa                                                                                                                     <  2:526027/143‑1 (MQ=255)
                           cgcTGGGCAACAAAACCTGTTGAGATTATTGCTTTTGTAGGCCGGAAAAGGCGTTTACACCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCCACTACTTTCCCCGCATCCGGCATaa                                                                                                                     >  2:240486/1‑143 (MQ=255)
                           cgcTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCTCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATaa                                                                                                                     <  1:1017270/143‑1 (MQ=255)
                           cgcTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCCCATCCGGCACaa                                                                                                                     <  1:899508/143‑1 (MQ=255)
                            gcTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATaaa                                                                                                                    <  2:284666/143‑1 (MQ=255)
                                  caaaaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGTATACGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGa                                                                                                              <  2:1033692/143‑1 (MQ=255)
                                   aacaaAAGCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAg                                                                                                             <  1:806211/143‑1 (MQ=255)
                                   aacaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCGTAAACAACGAg                                                                                                             >  1:27901/1‑143 (MQ=255)
                                   aacaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAGCAGCggc                                                                                                             >  2:573702/1‑141 (MQ=255)
                                   aacaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAg                                                                                                             >  1:899498/1‑143 (MQ=255)
                                   aacaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACCAg                                                                                                             >  1:928161/1‑143 (MQ=255)
                                    acaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGCGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGCCTTTCGCCGCACCCGGCACAAACAACGacc                                                                                                            >  2:483962/1‑141 (MQ=37)
                                       aaaCCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTc                                                                                                         <  1:611270/143‑1 (MQ=255)
                                        aaCCTGTTGAAATGATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCa                                                                                                        <  1:431672/143‑1 (MQ=255)
                                          ccTGTTGATATTATTTCTTTTTTAGTCCGGATAAGTCGTTTACGCCGCATCATGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGc                                                                                                      <  1:163839/143‑1 (MQ=38)
                                             gtggAAATTATTGCTTTTGTAGGCCGGATAAGGCGTGTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTaa                                                                                                   <  1:283415/140‑1 (MQ=255)
                                             gTTGAATTTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTaa                                                                                                   <  1:54916/143‑1 (MQ=255)
                                              ttGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTaaa                                                                                                  <  1:516180/143‑1 (MQ=255)
                                                ggcagtattCCTTTGGTAGGCCGGATCAGGCGCTTCCCCCGCCTCAGGCATCTGAGCATGATGCCTGATGCGGCACTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGCGCTTCAGCTAAACa                                                                                                <  2:840808/138‑1 (MQ=255)
                                                 aaaTTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATACGGGCTACGCCTTTCTCCGCATCCGGCATACACAACGAGCTTCAGCTaagacg                                                                                               >  2:420019/1‑139 (MQ=37)
                                                   attattGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGATCTTCAGCTaaaatttc                                                                                             >  1:236061/1‑138 (MQ=255)
                                                   attattGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGcc                                                                                             <  1:371645/143‑1 (MQ=255)
                                                     tattGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATACACAACGAGCCTCAGCTAAACAGCCCa                                                                                           >  2:990747/1‑143 (MQ=255)
                                                     tattGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTGCCGCTAAGCAGCCCa                                                                                           >  1:462613/1‑143 (MQ=255)
                                                        tGCTTTTGTAGGCCGGATAAGGTGTGTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCCATc                                                                                        >  2:380117/1‑143 (MQ=255)
                                                           ttttGGAGGCGGGATAAGGCGTTTACGCCGCATCAGGCATCGGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCAtt                                                                                     <  1:551633/143‑1 (MQ=255)
                                                             ttGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGc                                                                                   <  1:616374/143‑1 (MQ=255)
                                                              tGTAGGCCGGATAAGGCGGTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCg                                                                                  <  1:658690/143‑1 (MQ=255)
                                                               gTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTCTCAGGCCTACGACTTTCTCCGCATCCGGCATACACGACGAGCTTCAGCTCAACTGCCCACTCATAGcac                                                                                 >  1:231151/1‑141 (MQ=37)
                                                                 aGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCGAATCATGCCGGca                                                                               >  2:875936/1‑143 (MQ=255)
                                                                   gCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAACATGATGCCTGATGCGGCGCTGGTGGAGTCTTAGCAGGCGTACGACTTTCACCGCATCCGGCATAAACAGCGAGGTTCAGCTAAACCGCTGAGGCGTTGCGGcaca                                                                             >  2:324396/1‑143 (MQ=21)
                                                                     cGGATAAGGCGGTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGcacaca                                                                           <  1:1028088/143‑1 (MQ=255)
                                                                      ggATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAGCAACGAGCTTCAGCTAAACAGCCCAATCATTGCGACAAACAg                                                                          >  1:675142/1‑143 (MQ=255)
                                                                        ttAAGGCGGTTACGCCGCATCAGGCATCTGAGCATGATGCCGGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCa                                                                        <  2:161946/142‑1 (MQ=255)
                                                                        aTAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCCGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCCGCTAAACAGCCCAATCATTGCGGCACACAGCa                                                                        >  2:947382/1‑143 (MQ=255)
                                                                          aaGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACg                                                                      >  2:950325/1‑143 (MQ=255)
                                                                           aGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACgg                                                                     <  2:883636/143‑1 (MQ=255)
                                                                           aGGCGGTTCCGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACgg                                                                     <  2:632016/143‑1 (MQ=255)
                                                                             gCGTTTACGCCGCGTCAGGCAGCTGAGCATGTGGTGTGTCGCCACGCTGGCCGCGTCTGCTCAGGGCTACGGCGTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGgca                                                                   <  2:1030854/143‑1 (MQ=255)
                                                                             gCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGgca                                                                   <  1:974592/143‑1 (MQ=255)
                                                                             gCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGgca                                                                   <  1:827175/143‑1 (MQ=255)
                                                                              cGTTTACGCCGCATCAGGCATCTGAGCCCGAGGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCCACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGgcag                                                                  <  1:232416/143‑1 (MQ=255)
                                                                              cGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAAGAGCCCAAGCATTGCGGCACACTGCACGgcag                                                                  >  1:572176/1‑143 (MQ=255)
                                                                                 ttACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCaa                                                               >  1:993570/1‑143 (MQ=255)
                                                                                  tACGCCGCTTCAGGCACCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGCCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAAc                                                              <  2:98687/143‑1 (MQ=255)
                                                                                     gccgcATCAGACATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGc                                                           >  2:148744/1‑143 (MQ=255)
                                                                                      ccgcATTAGGCATCTGAGCGTGATGCCTGATGCGGCGCTCGTCGCGTCTTATCAGGCCTACGATTTTCTCCGCATCCGGCATAAACAGCGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCa                                                          <  2:1013975/143‑1 (MQ=255)
                                                                                         cATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCCCACCGCACGGCAGCCACGCCAggt                                                       >  2:305014/1‑141 (MQ=255)
                                                                                         cATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGtt                                                       <  1:380159/143‑1 (MQ=255)
                                                                                          aTCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGGCCAATCATTGCGGCACACAGCGCGGCAGCAACGGCAGgtt                                                      >  1:493554/1‑143 (MQ=255)
                                                                                          aTCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGttt                                                      <  2:779675/143‑1 (MQ=255)
                                                                                          aTCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGttt                                                      >  1:781585/1‑143 (MQ=255)
                                                                                            cAGGTATCTGAGCATGATGCCTGATGCGGCGCTGGTTGCGTCTGATCAGGCCGACGACTTTCTCCGCATCCGGCATAAACAACGCGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGc                                                    <  1:395239/143‑1 (MQ=255)
                                                                                            cAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATAATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGc                                                    <  2:341337/143‑1 (MQ=255)
                                                                                             cggCATCTGGGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTCCTCCGCACACGGCATAAACACCGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCg                                                   <  2:318059/142‑1 (MQ=255)
                                                                                               gCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCCACGGCAGTTCGCGgt                                                 >  1:525431/1‑143 (MQ=255)
                                                                                                cATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGgtg                                                <  1:429978/143‑1 (MQ=255)
                                                                                                 aTCTGGGCATGTTGCCTGGTGCGGTGTTGGTCGCGTCTTATCAGGCCTACGACTTTCGCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGgtgt                                               <  2:560002/143‑1 (MQ=255)
                                                                                                     gAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCCATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGgtgtgcag                                           >  1:1034344/1‑140 (MQ=255)
                                                                                                       gatagcagCCTGATGCAGCGCAGGACGCCTCTTATCAGGCATACGCCTTTCTCCGCATCCGGCATAAACCACGCGCTTCAGCTAAACCGCCTAATCATTGTGGTACACAGCACGGCAGCAACGGTAGTTTGCGGTGTGTGGCt                                         <  2:206079/136‑1 (MQ=255)
                                                                                                       gCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCt                                         <  1:809878/143‑1 (MQ=255)
                                                                                                       gCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGAATTTCTCCGCATCCGGCATAAACAACGCGCTCCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCt                                         <  1:850391/143‑1 (MQ=255)
                                                                                                         cgtaggcctgataagacgcgaccagcgccgcatcaggCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTCTGCGGTGGGTGGAtgc                                       >  2:244291‑M2/38‑142 (MQ=255)
                                                                                                         atgatgCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGt                                       <  2:33431/143‑1 (MQ=255)
                                                                                                             tgCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAAc                                   <  1:100681/143‑1 (MQ=255)
                                                                                                              gCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGCTGTGCGGCGGGCAACt                                  <  1:656484‑M1/142‑1 (MQ=255)
                                                                                                              gCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTAAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACt                                  <  1:543248‑M1/142‑1 (MQ=255)
                                                                                                               cctgataagacgcgaccagcgccgcatcaggCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGgca                                                                   >  1:848927‑M2/32‑109 (MQ=255)
                                                                                                                  gaggcggcgCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTgcgc                              <  1:830549/140‑1 (MQ=255)
                                                                                                                  GATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCCGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTgcgc                              <  1:430888‑M1/143‑1 (MQ=255)
                                                                                                                    TGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCa                            <  2:677256‑M1/143‑1 (MQ=255)
                                                                                                                    TGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACATTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACAGCAGCAACGCCAGATTACGGTGTGCGGCTGTAAACAGCCCCa                            <  2:250352‑M1/143‑1 (MQ=255)
                                                                                                                        gcgcTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCg                        >  1:766037/1‑143 (MQ=255)
                                                                                                                         cgcTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCGa                       <  1:623512/143‑1 (MQ=255)
                                                                                                                         cgcTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCGa                       <  2:840760/143‑1 (MQ=255)
                                                                                                                            tGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTGAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCGATAc                    <  1:534516/143‑1 (MQ=255)
                                                                                                                                     cccgtCAGGCATACGACGTTTTTCGCACCCTGCACAAACACCGCGCTTCAGCTAAACAGCCCGATCATGGGGGCTCACCGCACGTCAGCAACGCTAGTTTGCCGTGTGTGGCTGTCAACTGCGCCACTCCATACCAGattaat           <  2:237378/139‑1 (MQ=255)
                                                                                                                                        atcaggCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGc                                                                                <  2:434355‑M2/65‑1 (MQ=255)
                                                                                                                                         tcaggCCTACGACTTGCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCGATACCAGATTAattatt       <  2:658240‑M2/138‑1 (MQ=255)
                                                                                                                                              CCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCGATACCAGATTAATTATTGATTc  >  1:590115‑M2/1‑143 (MQ=255)
                                                                                                                                              CCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCGATACCAGATTAATTATTGATTc  >  2:482629‑M2/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
ATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCGATACCAGATTAATTATTGATTC  >  NC_000913/4053467‑4053751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.