| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,973,233 | T→G | 13.9% | C238G (TGC→GGC) | rffG → | dTDP‑glucose 4,6‑dehydratase 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,973,233 | 0 | T | G | 13.9% | 173.7 / 4.0 | 82 | C238G (TGC→GGC) | rffG | dTDP‑glucose 4,6‑dehydratase 2 |
| Reads supporting (aligned to +/- strand): ref base T (44/22); new base G (2/13); total (47/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.64e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTACGGCCCTTACCACTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACAAGCCGCACGGCGTGGCGCACTA > NC_000913/3973091‑3973372 | cTACGGCCCTTACCCCTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTAtt < 1:755682/143‑1 (MQ=255) gCCCTTACCACTTTCCGGAAAACCTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTg < 2:602951/143‑1 (MQ=255) cccTTACCACTTTCCGGAAGAACTGATCCCGCGGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTgg < 1:605500/143‑1 (MQ=255) cccTTACCACTTTCCGGAAACACTGATCCCGCTGATGTTCCTCAGCGCCCTCACGGGTAAATCACTGCCGGTATATCGCAACGGCCAGCAAACCCCGGACTGCCCGTATGTGCACGCTCACGCCCGCAAGCTCTATTgactcg > 2:868420/1‑138 (MQ=255) cccTTACCACTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCAGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGGATTGCGTgg > 1:432460/1‑143 (MQ=255) ccTTACCACTTTCCGGAAAAACTGATCCCGCTGATGATCCTCACCGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCACCGGGCGGCCACTCCGTGCCTGGCGGGCTGTGGCCGATCACGCCCCCGCCCTCTATCGCGTgcc > 2:861440/1‑141 (MQ=255) aCCACTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGccc > 1:385074/1‑143 (MQ=255) cACTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGTGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTCTTGCGTGGCggcggc > 1:44548/1‑138 (MQ=255) cACTGTCAGGAAAAACGGACCCCGCTGAGGACCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGGGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGaccac < 1:116851/143‑1 (MQ=255) cTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGGATTGCGTGGCGACCACCg > 1:384806/1‑143 (MQ=255) tCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGCGACTGGCTGGATGTGGAAGATCACGCCCGCGCGCCGTATTGCGTGGCGGCCACCgggc > 2:999792/1‑142 (MQ=255) ggAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCGCGCCCGCGCGCTGTATTGCCTGGCGGCCACCgggtgcg > 1:936611/1‑139 (MQ=255) ggAAAAACTGATCCCGCTGATGATACTCAACGCGGTGGCGGGTAAATCGCTGCCGGAATATGGCAACGGGCAGGCAATCCGTGACTGGCTGTATGCGGAAGATCACCCCCGAGCGCGGTCTTGCGTGGCTGCCCCCGGCaagc > 2:587296/1‑141 (MQ=255) ggAAAAACTGATCCCGCTGATGAACCTCAAGGCGCTGGCGGGTGAATCGCTGACGGTATATGGCAACGGACAGCAAATCCGTGACTGGCAGTATGTGGAAGCTCAGGCACGCGCGCTGCATGACGTAGAGACGCCCggggcag > 2:1006366/1‑139 (MQ=255) gAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGTCGACAAGCGGGACAgg > 1:160295/1‑142 (MQ=255) gAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGt > 1:935297/1‑143 (MQ=255) gAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGGGGAAGGTCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAGAGt > 1:635665/1‑143 (MQ=255) gAAAAACTGATCCAGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGCATATGGCAACGGGCAGCAAATCCGTGACTGCCTGAATGTGGCAGATCACGCCCGCGCGCTGGATTGCGTGGCGCCCACCGGGAACGt > 2:988275/1‑143 (MQ=255) aaaCTGATCCCGCTGAGGAGCCTCACCGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCATATCCGTGACTGGCTGTATGTGGAAGAGCACGCTTGTGTTTTTAATGATGCGGCGACCACCGAGAAAGTCgg < 2:685924/143‑1 (MQ=255) aaCTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGt < 1:160344/143‑1 (MQ=255) aCTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCGCGCCCGCGCGCTGTACTGCGGGGCGTCGAGCGGGAAAGTCgggg > 2:159216/1‑141 (MQ=255) aCTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTg > 1:478563/1‑143 (MQ=255) tGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGCAAGTCGgagac > 2:834650/1‑142 (MQ=255) tGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGaa < 1:871075/143‑1 (MQ=255) ccGCTGGTGATCCTCAGCGCGCTGGCAGAAAAATCTGTTCCGGTATATGGCAACGGGCAGCTATTCCGGGACGGGCTGTATGTGGAAGATCAAGCTTTTGTGTTGAATGATGCGGCGACCACCGAGAAAGTCGGTGAAACCta < 2:217240/143‑1 (MQ=255) cGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCtat > 1:472035/1‑143 (MQ=255) gCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTGTGGCGTGGCGACCCGCGGGAACGTCGGTGGAGCCtata > 2:1059230/1‑143 (MQ=255) gCTGAGGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCtata < 1:972295/143‑1 (MQ=255) tgatgaTCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTataat > 1:503232/1‑143 (MQ=255) tgatCCTCAGCGAGCGGGCGGGGAAAGCGCAGTCGCTATATGGCAACGGTCAGCAATTCCGGGACGGGAGGGATGTGGAAGAGCACGTTTTTTTTTTTAATGATACGGCGACCACCGAGAAAGTCGGTGAAACCTATAATAtt < 2:964602/143‑1 (MQ=255) cgatCCTCAACGCGCTGGCGGGTAAATCGCTGCGGGGAGATGGCAACGGGCATCTAATCCGTGACTGGCTGTATGTGGAAGATCACGCTTGTTTTTTTAATGATACGGCGACCACCGAGAAAGTCGGTGAAACCTATAATAtt < 2:186720/142‑1 (MQ=255) gctCCCCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGTTTGTTTTCTTAATGATACGGCGACCACCGAGAAAGTCGGTGAAACCTATAATATtg < 2:593476/141‑1 (MQ=255) gatCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGGAAGTCGGTGGAACCTATAATATtg > 1:616753/1‑143 (MQ=255) tCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATGTGGCAACGGGCAGCAAATCCGTGACTGGCTGAATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATtggt > 1:836089/1‑143 (MQ=255) cTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATtggtgg > 1:919367/1‑143 (MQ=255) cTCAACGCGCTGGCGGGTAAATCGCTGCAGGTCGATACGAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATtggtgg < 1:720045/143‑1 (MQ=255) gggcTGGCGTGTAAATCCGTGTCGGTGTTTGGCACCGGGCATCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCTTTTTTTTTTAATGGTATGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACaa < 2:217635/141‑1 (MQ=255) tGGCGGGTAAATCGCTGGCGGTATCTGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGCTGATCCCCTCCTCTCTATGTATTGTTTACGAACCATCCGGAAAGGCGGTGAAACCTATAATATTGGTGGTCACAACGAg < 1:1060948/143‑1 (MQ=255) ggCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGGATTGCGTGGCGACCACCGGGAAAGTCGGGGGAACCTATAATATTGGTGGTCACGACGGGc > 1:91222/1‑143 (MQ=255) cGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTAGGTGAAACCTATAATATTGGTGGTCACAACGAGCGt < 1:451250/143‑1 (MQ=255) gggTGAATCGCGGCCGGTATATGGCCACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTa < 1:361574/143‑1 (MQ=255) gggCAAATCGCCGCCGGTATATGGCAACGGGCAGCAAAGCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTa < 1:939362/143‑1 (MQ=255) tAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAGCGAGCGTAGGa > 1:968634/1‑143 (MQ=255) tAAATCGCTGCAGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGa > 1:246745/1‑143 (MQ=255) aaaTCGTTGCCGGTATATGGCAACGGGCAGCAAATCAGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCAGTATTGCCTGGCGACGACCGGGACAGTCCGCGACACCTATGATATCCGAGGCCACCCCGAGCggacaca > 2:185266/1‑137 (MQ=255) tCGCTGGCGGTATAGGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAAtct < 1:991948/143‑1 (MQ=255) tCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTACAAACGAGCGTAAGAAtct > 1:140209/1‑143 (MQ=255) ggtcgttataTGGCAACGGGGAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATGGCGTGGCGACCACCGAGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGAt < 2:587710/137‑1 (MQ=255) ccGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGGGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTtgttgt > 1:139341/1‑143 (MQ=255) ggtttcaggCAACGGGCTGGATATCCGTGACTGGGTGTATGTGGCAGATCACGCTCGCTTTCTTAATGACACGGCGACCACCGAGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGAtgttg < 2:970780/136‑1 (MQ=255) ggTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGAtgttg > 1:1035706/1‑143 (MQ=255) tataTGGCAACGGGCAGCAAATCCGTGACTGGCTGAAATTGGAAGATCACGCCCGCGCGCTGTATTTCGTGGCGACCACCGGGAAGGTCGGGGGAACCTACAAGATGGGCGGTCGCAACGAGCGGAAGAATCTCGATGCtgtg > 2:78280/1‑143 (MQ=255) atatGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATCTTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTgg < 1:808731/143‑1 (MQ=255) tGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGaaa < 1:94977/143‑1 (MQ=255) tGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGaaa > 1:544680/1‑143 (MQ=255) ggCAACGGGGAGCGGTTCCGTGACTGGCTGTGTGTGGAAGATCGGGCGTGCGTTTTTAATGATGCGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAAc < 2:237854/143‑1 (MQ=255) gCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGCAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAAcc > 1:362277/1‑143 (MQ=255) gCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGGGACACCTATAATATTGGTGGTCACAACGCGCGTAAGAATCTCGACGTTGCGGACAcc > 1:809484/1‑143 (MQ=255) cAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCa > 1:430132/1‑143 (MQ=255) aaCGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGGAAGTCGGTGAAACCTATAATATTGGTGGTCACCACGAGCGTGAGATGCTCGATGTTGTgggcaccgt > 1:926709/1‑136 (MQ=255) aCGGGCAGCAACTCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCAtt < 1:812326/143‑1 (MQ=255) cGGGGAGCATATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGTGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCAttt < 2:723710/143‑1 (MQ=255) cGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCAttt > 1:580282/1‑143 (MQ=255) cagcaAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGa < 1:786677/143‑1 (MQ=255) aaaTCCGTGACTGGCTGTATGTGGCAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAgctg < 1:374431/143‑1 (MQ=255) gaTCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAgctgc < 1:989528/142‑1 (MQ=255) cgttgatGGCTGTATGTGGCAGATCTCTGCCGGGTGCTTTATGGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGGGGTCACGACGGGCGTAAGAAGCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGga < 2:836089/137‑1 (MQ=255) cGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATGGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGga < 2:935297/143‑1 (MQ=255) tGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGgaag > 1:387221/1‑143 (MQ=255) aCTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGGCGACCGGGAAAGTCGGGGAAACCTATAATATTGGTGGTCACAACGCGCGTGAGAATCTGGCTGTTGTGGAAACAATTTCCGAGCTGCCGgacgac > 2:989563/1‑142 (MQ=255) gTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGCTGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTc > 1:116169/1‑143 (MQ=255) aTGTGGAAGGTCACGCTCTGTTGCTGAATGGCGCGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCg < 2:44548/143‑1 (MQ=255) aTGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGGGAAACCTATAATATTGGTGGTCACAACGCGCGTACGAATCTCGATGTTGTGGAAACCACTAGCGAGCTACTGGAAGAACTggacacg > 2:283075/1‑138 (MQ=255) tgGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAAc > 1:155447/1‑143 (MQ=255) cACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGTTGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACAAGCCGCa < 1:893760/143‑1 (MQ=255) aCGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGGAACCATTTGCGACCCGCTGCGCGAACAGGCTCCGACCCAGCCacac > 1:997656/1‑143 (MQ=255) aCGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACACGCCGCAc > 1:820737/1‑143 (MQ=255) aCGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCGATAATAGTGGTGGTCAAAACGAGGGTAAGAATCGCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACCGGCGACGAACAAGCCGCAc > 1:133379/1‑143 (MQ=255) cGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACAAGCCGCACg < 1:478233/143‑1 (MQ=255) gCCCTCGTGGTGTATGGTGCGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTTAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACAAGCCGCACgg < 2:530365/143‑1 (MQ=255) ccGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCGCCGAACAAGCCGCACGGCg > 1:575433/1‑143 (MQ=255) cTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACAAGCCGCACGGCGTGGCGCa < 1:159216/143‑1 (MQ=255) tATTGCGTGGCGACCACCGGGAAAGTCGGTGAAAGCTATAATATTGGTGGTCACAACGAGCGTAGGAATCTCAATGTTGTGGAAACCATTTGCGAGCTGCTGGAGGAACTGGTTCCGAACAAGCCGCCCGGCGTGgcgacctg > 2:951184/1‑138 (MQ=255) | CTACGGCCCTTACCACTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACAAGCCGCACGGCGTGGCGCACTA > NC_000913/3973091‑3973372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |