| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,270,144 | G→C | 5.5% | intergenic (+17/‑94) | aphA → / → yjbQ | acid phosphatase/phosphotransferase/UPF0047 protein YjbQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,270,144 | 0 | G | C | 5.5% | 297.3 / 7.7 | 105 | intergenic (+17/‑94) | aphA/yjbQ | acid phosphatase/phosphotransferase/UPF0047 protein YjbQ |
| Reads supporting (aligned to +/- strand): ref base G (58/38); new base C (4/2); total (63/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.31e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTC > NC_000913/4270003‑4270286 | ttACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACCGAGCGGGAGAGCGTGa < 2:327873/143‑1 (MQ=255) ccgcACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGctct > 1:497653/1‑143 (MQ=255) cgcACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCtctc > 2:1057563/1‑143 (MQ=255) cgcACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGCGCTCGTCACTTCAGAATACTGACAGAGCAGGAAAGAGACATACtctc > 1:122299/1‑143 (MQ=255) gcACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCATCACGCTCTcc < 2:168277/143‑1 (MQ=255) cACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTCGTGCAGAGGTGATCGTCAATTCAGGATACTGACAGAGCGGGAGAGCGTTATGCTCTccc > 2:724237/1‑143 (MQ=255) gcgcgATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACCAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCGATTCAGAATACTGACAGAGCGGGAGAGCATCACGCTCTCCCg < 2:870062/142‑1 (MQ=255) gATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCGCGACTg > 1:1063178/1‑143 (MQ=255) aTGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGc > 2:810017/1‑143 (MQ=255) cgcTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGGTCGTCAATTCAGAATACGGACAGAGAGGGCGAGCGTGACGCTCTCCCGGATGCTgctctt > 2:507936/1‑138 (MQ=255) gcTCGTGGGATCCGCATTGTGCGCGCCTCCACCTCGACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑tttttt < 2:791741/143‑1 (MQ=255) cTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACCGACCGCCGAAGTAACGCTGTGAGTCAGTCGAAGAGGTGATCGTCAATTCAGCATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑ttttttt < 2:1034622/143‑1 (MQ=255) gcGTGGTATCCGTATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTa < 2:1024333/142‑1 (MQ=255) gTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAGACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAAt < 2:844895/143‑1 (MQ=255) tGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAATAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATc > 2:981036/1‑143 (MQ=255) tATCCGCATTCTGCGTGTCTCCAGTTCTACCTACATTCCCTTGCCACTAGCGGGTGCGTTTGGTGAAGAGGTCTTCCTGTAGTTAGAATTCTGTCAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATcaca < 1:668869/143‑1 (MQ=255) tATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCGCTCCCGAATGCTG‑TTTTTTTAATcaca < 2:289433/143‑1 (MQ=255) ctCCGCGTTCTGCGCGCCCCCCACTCTACCTACCAACCCTTCCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCacac < 1:875745/142‑1 (MQ=255) aTCCGCATTCTGCGCGCCTCCAACGCTACCGACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCacac < 1:312282/143‑1 (MQ=255) tCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATAACAcc > 2:371419/1‑143 (MQ=255) tCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATACAGAATACTGACAGAGAGGGAGAGCGTGCTGCTCTCCCGAATGCTG‑TTGTGTTAATCACAcc > 2:324483/1‑143 (MQ=255) cGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGACGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCtt > 2:359662/1‑143 (MQ=255) cATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGGTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTa < 1:442175/143‑1 (MQ=255) cgcCCCCAACTCTGCCTACAACCCCTTGCCACAAGCGGGTGCGTTTGGCGAAGAGGTGATCGTCAACTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGc < 2:1016819/143‑1 (MQ=255) tCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTc < 1:646586/143‑1 (MQ=255) tCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTc > 2:780403/1‑143 (MQ=255) ccAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGCTCGTCAATTCAGAATACTGACCGAGCGGGAGAGCGTGATGCTCTCCCGAGTGCTG‑TTTTTTTAGTCACACCTTTATCCTTTCGCGGTCt > 1:306407/1‑143 (MQ=255) gaaCTCGACCTACAAGCCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCtt < 2:653701/142‑1 (MQ=255) aaCTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCCCACCTTTATCCTTTCGCTGTCttt > 2:514949/1‑142 (MQ=255) aaCTCAACCTACAAACCCCTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTTATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTtg < 1:553216/143‑1 (MQ=255) aCTCTCCCTACGACCCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTtgc < 2:625001/143‑1 (MQ=255) aCTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTtgc < 1:815723/143‑1 (MQ=255) tctACCTACAAGCCCTTGCCACGAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTtgctg < 2:354660/143‑1 (MQ=255) tctACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGGGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTTATCACACCTTTATCCTTTCGGTGTATttctg > 2:104199/1‑143 (MQ=255) tctACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTtgctg > 1:575152/1‑143 (MQ=255) tacctacAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGCCATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGACCCTCTCCCGTAAGCTG‑TTTTTTTAATCACACCTTAATCCTCTCGCTGTCTtgctgcc > 2:469583/1‑142 (MQ=255) ctacAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAAc > 1:891747/1‑143 (MQ=255) ctacAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAAc < 1:1057563/143‑1 (MQ=255) tacAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACt > 1:455442/1‑143 (MQ=255) acAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTg < 1:180364/143‑1 (MQ=255) agcccTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGAtt < 1:863708/141‑1 (MQ=255) aaCCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTCTCCTTTCGCTATCTTCCTGCAAACTTAtc > 2:943330/1‑142 (MQ=255) aaCCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGAtt > 1:62236/1‑143 (MQ=255) cccTTGGCACAAGCGGTGGCGTTTGGTGAAGAGGTGATCGTCAATTCAGGATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTaa < 1:630274/143‑1 (MQ=255) cccTTGCCACAAGCGGGTGCGTTTGGTGACGAGGTGATCGTCAATTCAGAATACTGACAGAGCGTGAGCGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCCAACTCATTac > 2:784053/1‑142 (MQ=255) cccTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAACCTGtttgc > 2:411773/1‑141 (MQ=255) cccTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACAACTTTAGCCTTTCGCTGTCTTGCTGCAAAGCGATTaa > 2:765482/1‑143 (MQ=255) ccTTGCCCCCAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCCCACCTTTATCCTTTTGCTGTCTTGCTGCAAACTGATTAag < 1:250772/143‑1 (MQ=255) cTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAATCTGATTAagc > 2:682243/1‑142 (MQ=255) cTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAaga < 1:1031785/143‑1 (MQ=255) cTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAaga > 1:755580/1‑143 (MQ=255) ttGCCACAAGCGGGTGCGTTTGGTGAAGAGCGGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTATCCCGCATGCTG‑TTTTTTTAGTGACACCTTTATCCTTTCGCGGTCTTGCGGCAAACTGGTTGagag > 1:17864/1‑143 (MQ=255) ccACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGt < 2:254174/143‑1 (MQ=255) cacaAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCGTGCTGCAAACTGACTAAGAGAGtt > 1:627534/1‑143 (MQ=255) caAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGtttt > 1:576706/1‑143 (MQ=255) gggTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCaa < 1:810017/143‑1 (MQ=255) tGCGTTTGGTGAAGAGGTGAGCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGa < 1:272304/143‑1 (MQ=255) gCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGag < 1:513319/143‑1 (MQ=255) gCGTTTGGTGAAGAGGCGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGCTGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTAATACATAAGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGat > 1:586018/1‑142 (MQ=255) gTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCTTACTGATTAACAGCGATTTCTCacgccgcc > 1:583799/1‑136 (MQ=255) gTGAAGAGGTGATCGACAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGcaca > 2:897219/1‑143 (MQ=255) aaGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTACGAGAGTTTTATCACGTAGCAGCACAtgt > 2:165921/1‑143 (MQ=255) gTGATCGTCGATGCAGCATACTGACATAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTAt < 2:608426/143‑1 (MQ=255) gTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCCCACCTTTATCCTTTCGCTGTCTTGCGGCAAACTGATTAAGAGAGTTTTATGAAGGAGCAGCACCTGTGGTAt > 1:269634/1‑143 (MQ=255) tGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTAt < 2:547066/143‑1 (MQ=255) tCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCaaa < 1:610495/143‑1 (MQ=255) gTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTCTCAAGGCGCAGCACATGTGGTATCaaacg > 1:864768/1‑141 (MQ=255) gTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCaaacg > 1:296205/1‑141 (MQ=255) gTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAg > 1:500570/1‑143 (MQ=255) tCAATTCAGAACACTGACAGAGCGGGAGCGCGTGATGCTTTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGa < 1:136942/143‑1 (MQ=255) cAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGAc > 1:927692/1‑143 (MQ=255) aaTTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACGCCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACg < 1:105001/143‑1 (MQ=255) cAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGCGCAGCACATGTGGTATCAAAAGACGCTCa > 1:901717/1‑143 (MQ=255) cAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCa > 2:676945/1‑143 (MQ=255) gAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATGAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGccaccg > 2:727410/1‑138 (MQ=255) aaTACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGATTTATCAAGGGGGAGTACGTGTGGTATCAAAAGACGCTCACGc > 1:284268/1‑143 (MQ=255) aaTACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGAGTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGc > 1:619634/1‑143 (MQ=255) aCTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTa < 2:679039/143‑1 (MQ=255) tGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTCCGCTGTATTGCTGCAAACTGATTAACAGAGATTAATTATTTAGCGGCGCATGTGGGATCACAAGACGCTCACGcgtcgc > 2:366539/1‑138 (MQ=255) aCAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACATCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGTAGCCCTTGTTGTATCAAAAGAGGGTCACACTTAtcgc > 2:304212/1‑143 (MQ=255) aCAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAGACTGATTAAGGGAGTTTTATCAAGGAGCAGCCCCTGTGGTATCAAAAGACGAACACACTTAacgc > 1:256670/1‑143 (MQ=255) aCAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAgcgc > 1:130574/1‑143 (MQ=255) cattcGGGAGAGCATCACGCTCTCCCGCATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCa > 2:955168/5‑143 (MQ=255) agagCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCGTAGGCCTTTGGCTGTGTTGCTGCAAACCGATTAAGAGAGTTTTATCAAGGAGCGGCACATGTGGTATCAAACGACGCTCACGCTTAGCGACa > 1:608942/1‑143 (MQ=255) ttcGGGAGAGCATCACGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCaac > 2:398154/3‑142 (MQ=255) agCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTACTGAATCACGCCTGTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGGTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTAACGCTTAGCGCCaaa > 1:835340/1‑143 (MQ=255) gCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACCCTTAGCACCCAAt > 2:615410/1‑143 (MQ=255) gggAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACAGGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAAtct > 1:199395/1‑143 (MQ=255) gggAGAGCATCACGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAACCTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAAcct > 2:814090/1‑143 (MQ=255) ggAGTGCGTGTTGCTCTCCCGAGTGCTG‑TTTTTTTAATCACACCTGTATCCTTTCGCTGTCTTGCTGCAATCTGTTTAAGTGAGTTTTATCATGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAAtctc < 2:37198/143‑1 (MQ=255) gagaGCGTGATGCTCTACCGAATGCTG‑TTTTTTTAATCACACATTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCCAGGAGAAGCACCAGTCGCACGACAAGACGCTCAAGCTAAGCGCCaaaccaac > 2:41794/1‑138 (MQ=255) agagCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGt < 1:962117/143‑1 (MQ=255) gagCGTGATGCGCTCCAGAATGCTG‑TTTTTGTAAGCGCACCTTTGTCCTTTCGCTGTCTTGCTGCAAACTGATGAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTg < 2:368551/143‑1 (MQ=255) agCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAACAGACGCTCACGCTTAGCGCCAAATCTCGTgg > 1:225913/1‑143 (MQ=255) gCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTggg < 1:897219/143‑1 (MQ=255) cGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGt > 1:229660/1‑143 (MQ=255) gTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAACAGATGCTAACGATTAGCGCCAAATCTCGTGGttt > 1:271860/1‑143 (MQ=255) tGATGCTCTCCCGAATGCTG‑TTTTTTTAATCAAACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGGTTTATCACGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCGGAATCTCGTgggggt > 1:734784/1‑140 (MQ=255) gATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGCTTc > 1:561873/1‑143 (MQ=255) gATGCTCTCCCGAATGCTG‑TGTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGCGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTc < 2:289575/143‑1 (MQ=255) | TTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTG‑TTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTC > NC_000913/4270003‑4270286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |