| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,274,740 | G→A | 5.0% | intergenic (+79/+20) | ssb → / ← yjcB | ssDNA‑binding protein/uncharacterized protein YjcB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,274,740 | 0 | G | A | 5.0% | 304.7 / 4.5 | 111 | intergenic (+79/+20) | ssb/yjcB | ssDNA‑binding protein/uncharacterized protein YjcB |
| Reads supporting (aligned to +/- strand): ref base G (51/54); new base A (4/2); total (55/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.08e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
CCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCG > NC_000913/4274600‑4274880 | ccGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGtt < 2:995997/143‑1 (MQ=255) cTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCGTCCGTTATg > 2:815655/1‑143 (MQ=255) ccGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGa < 1:164553/143‑1 (MQ=255) cGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAg < 2:244461/143‑1 (MQ=255) gCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTACGGTGGATGATTA‑AAGAATCTGCCAGCCATAAAAAAGAAGCCACAATTATGGAGGc > 2:694338/1‑143 (MQ=255) gCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAACAGAAGCCTCCGTTATGGAGGc > 1:353278/1‑143 (MQ=255) cAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCt > 2:711843/1‑143 (MQ=255) cAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATGA‑AAGCATCTGCCAGCCATAAAACAGACGCCTCCGCTATGGATGca > 2:542141/1‑142 (MQ=255) aGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCATAACGGAGGCtt < 2:43192/143‑1 (MQ=255) gcgcCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCCGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTc > 2:27064/1‑143 (MQ=255) gcgcCGTCTAACGAGCCGCCGATGGACTTAGATGATGGCCTTCCGTTCGCATGTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAAGAGCCTCCGTTATGGACGCTTc > 2:34381/1‑143 (MQ=255) cgcCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATCTTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCt > 1:757078/1‑143 (MQ=255) cgcCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCt > 1:595314/1‑143 (MQ=255) gtttAACGGGCCGCCGATGGACGTTGAGGATGACATTCCGTTCGGATTTGTCATTAAAACTATAGGTTATATTGTGTGAAGGGGGATGATTA‑AAGCGTCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGt < 2:424296/140‑1 (MQ=255) tCTAACGAGCCGCCGCTGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAGTAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTa > 1:895169/1‑143 (MQ=255) ctacctaGCCGCCGATGGACTTTGACGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCGTCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTAt < 2:338755/137‑1 (MQ=255) cgaaCGAGCCGCCGATGGACTTTGATGATGACATTCCGTGCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTAt < 1:300721/141‑1 (MQ=255) aaCGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCa < 1:1004671/143‑1 (MQ=255) aaCGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCa < 2:327874/143‑1 (MQ=255) aCGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAg < 1:558329/143‑1 (MQ=255) aCGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAg < 1:794352/143‑1 (MQ=255) aCGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAg > 1:674494/1‑143 (MQ=255) gAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGt < 1:670236/143‑1 (MQ=255) gccgccGATGGACTATGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTGTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGGTTCTACGTATCAGGTCa > 2:356394/1‑143 (MQ=255) ccgtgggtGGACTTTGCTGATGACGTTCCGTTCTGAGTGGTCATTAAAACAATAGGTTATATGGTTTTACGGTGGATGGTTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCaa < 1:1063849/136‑1 (MQ=255) ccgccgATGGACTCTGATGATGAAACTCCGTTCTGATCTGTCATTAAAACAATAGGTTACATTGTCTTAAGGTGGATCATTA‑AAGCCTCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCaa < 1:953697/143‑1 (MQ=255) tttcgAGGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCaaa < 1:233757/140‑1 (MQ=255) cgccgATGGACTTTGATGATGGCATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCaaa < 1:590139/143‑1 (MQ=255) gccgATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCaaaa > 2:613584/1‑143 (MQ=255) aTGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCAt > 1:1040046/1‑143 (MQ=255) aTGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGGATCAGGTCAAAATCAt > 1:68577/1‑143 (MQ=255) tGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAAAAATAGGTTATAAAGTAGTAAGGTGGAT‑ATGACAACCAGCGGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCAtt > 1:246572/1‑143 (MQ=255) ggACTTTGATGATGACATTCCGTTCTGCTTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGCGGCTTCTACGTATCAGGTCACAATCAtcg > 2:175917/1‑141 (MQ=255) ggACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTCCGTAACAGGTCAACACCATTg > 1:320897/1‑143 (MQ=255) cttGATGATGACATTACGTTCTGATTTGTCATTATAACAATAGGGTATAGTGTTTTAGGGTGGATGATTA‑AAGCATATGCCAGACATATAAAAGAAGCATCCGTGATGGAGGCTTCTACGTATCAGGTAAGAATTAGTGGACa > 2:448270/2‑143 (MQ=255) atgatgaCAGTCCGTTCTGAGTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCACTGGCCATtgt < 2:990748/143‑1 (MQ=255) atgaCATTCCGTTCTGATTTGTCATTAAAACAAAAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTACCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGACCATTGTGGc > 1:361917/1‑143 (MQ=255) gaCATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGAGGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCgg < 1:167451/143‑1 (MQ=255) gaCATTCCGTTCTGATTTGTAATTAAAACAATCGGTTATATTGTCTTAAGGTGGATGATTA‑AAGCATCTGACAACAACAAAACAGAAGCCTCAGTTATGGAGGCTACTACGTACCAGGCCAAAATCATTGGCCAATGTGGCgg > 1:270790/1‑143 (MQ=255) aCATTCCGTTCTGATTTGTCAGTAAAACAATAGGTTATATTGTTTTAAAGTGGATGATAA‑ACGCTTTTTTTTTCCATAAGAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGgt < 1:289659/143‑1 (MQ=255) aTTCTGTTCTGATTGGTGTTAAAACCGATAGGTTGTATTGTTTTAAGGTGGATAATTA‑AAGCATCTCCCAGCCATAAAAAAGTAGCCTCCGCTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGgtgt < 2:960050/143‑1 (MQ=255) aTTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGgtgt > 1:643691/1‑143 (MQ=255) tgccGGTCTGATTTGTCGTTAAAAGTATATTTTATATTGTTTTAAGGTGGATGATTA‑AATCATATGTTAGCGATATTAATGATGCCTACGTTATGGAGGCTTCTAAGTATCAGGTGAACATTATTGGACATTGTGGAGgtatt > 2:733588/3‑140 (MQ=255) tCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCt < 1:203847/143‑1 (MQ=255) ttCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGGCAGCCGTAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCACAATCATTCGCGATTGTGGCGGTGTCTGaga > 2:424274/1‑141 (MQ=255) tGATTTGTCATTAAAAGAATAGGTTGTATGGTTGCAACGTCAATAATTG‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCAt < 2:219683/143‑1 (MQ=255) tGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATAATTGGCAATGGTGGCGATGTCTGATTCag > 2:897896/1‑142 (MQ=255) tttGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAACAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAACTCATTGACCATTGTGGCGGAGTCTGAttactacc > 2:103611/1‑137 (MQ=255) ttGGCATTAAAACGATAGGTTATAGTGTTTTAAGGTGGATGAGTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATctct < 2:975791/143‑1 (MQ=255) tGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCtctt < 2:386249/143‑1 (MQ=255) tGTCATTAAAACAATAGGTGATATTGTTTCGAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCtctt < 2:261012/143‑1 (MQ=255) gTCATTAAAACAATAGGTTAGAGTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCtcttc < 1:620773/143‑1 (MQ=255) aTTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTGCTat > 2:570216/1‑143 (MQ=255) ttAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCGGCCAGCCAAAAAAAAGAAGACTCCGTTATGGAGGCTTCTACGTATCAGGTCGAAATCATTGGCCATTGTGGCGGTGGCTGATTCATCTCGTCTatc > 1:205061/1‑143 (MQ=255) cggcAATAGGTTATATTGTGTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTatcatc < 1:883270/140‑1 (MQ=255) aaCAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTataatcc > 2:404745/1‑142 (MQ=255) acataaGGTTCTGTTGGTTGAAGGTGCATGAAGA‑AAGCAGCTGACAGCCATAAAAAAGAAGCCTCCGTGATGGAGGCTTCTACGGATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCAc < 2:344520/138‑1 (MQ=255) aTAGGTGATATTGTGTTAAGGTGGATGATTA‑AAGCATCGGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGa < 1:363553/143‑1 (MQ=255) aGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACt < 1:694338/143‑1 (MQ=255) ggTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCACTGTGGCAGAGACTGATTCATCTCTTCTATCATAACCGAATc > 2:284852/1‑143 (MQ=255) gTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCg > 1:478930/1‑143 (MQ=255) tataGTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGAt < 1:945304/143‑1 (MQ=255) atTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGAtgtt > 2:463901/1‑143 (MQ=255) atTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCGACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGACTCATCTCTTCTATCATCACCGGCTCCAtgtt > 2:718378/1‑143 (MQ=255) ttGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGAtgttg > 1:690391/1‑143 (MQ=255) gTTTTAAGGGGGATGATTA‑AAGCAGCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATGGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTtgtg < 2:545506/143‑1 (MQ=255) ttttAAGGTGGATGATTA‑AATCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGc < 1:563987/143‑1 (MQ=255) ttttAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGTCTACCCAGTATAAGGTCTGAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATAATGTGc > 2:375139/1‑143 (MQ=255) ttttAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGc > 1:986099/1‑143 (MQ=255) ttttAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTGCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGc < 2:965098/143‑1 (MQ=255) tttATGGTGGTTGATTT‑TAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGcc < 2:668840/143‑1 (MQ=255) aaGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGa > 2:542925/1‑143 (MQ=255) aaGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGa > 1:957035/1‑143 (MQ=255) gatgatTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCgg < 2:1057201/143‑1 (MQ=255) atgatTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGt < 1:615736/143‑1 (MQ=255) atgatTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGt < 2:246572/143‑1 (MQ=255) atTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCAGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGAt > 1:813644/1‑143 (MQ=255) ttA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATg > 1:871222/1‑143 (MQ=255) a‑aaGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCGTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTc < 1:515672/143‑1 (MQ=255) aggCATCTGCCAGCCATAACAAAGTAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTcc < 2:1002474/141‑1 (MQ=255) aGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTcca < 1:711843/143‑2 (MQ=255) cTGCCAGCCATAAAAAAGAAGCATCCGTTATGGAGGCTTCTACGTATCAGGGCAAAATCATGGGCAATTGTGGCGGTGTCTGATTCATCTCTTCTATCAGCACCGACTCGGTGTTGTGCCAGATGGGGGTGATGACTGccggt > 1:785045/1‑140 (MQ=255) tGCCAGCCATAAAGAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCAGTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATtg < 1:1167/143‑1 (MQ=255) tGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATtg < 1:648003/143‑1 (MQ=255) gccagccaTAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGGCAGATAGCGGTGATGTCCGCCATtgt > 1:717235/1‑143 (MQ=255) ccagccaTAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATtgtg > 1:624994/1‑143 (MQ=255) cagccaTAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGa < 1:749483/143‑1 (MQ=255) aaaaaaGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAg > 1:712767/1‑143 (MQ=255) aaaaGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCa > 1:807103/1‑143 (MQ=255) gtagaagCCTCCATAACGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCCTCACCGACTCGCTGTTGTGCCAGATAGCGGTTATGTCCGCCATTGTGATACCAAGCaa > 1:876580/3‑143 (MQ=255) gtagaagCCTCCATAACGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCaa > 2:273683/3‑143 (MQ=255) aaaGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCaa > 2:99571/1‑143 (MQ=255) tagaagCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAAc < 2:290739/142‑1 (MQ=255) agaagCCTCCATAACGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCAGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAAcc > 2:546829/1‑143 (MQ=255) aagCCTCCGTTCTGGAGGCTTCTACGTATCAGCTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAAcccc < 1:821141/143‑1 (MQ=255) cTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTg > 1:128037/1‑143 (MQ=255) cTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTACGCCATTGTGATGCCAAGCAAACCCATTg > 1:136404/1‑143 (MQ=255) tCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCGATGGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGGTGTGCCAGATAGCGGTGATGTCCGCCATTGTGCTGCCAAGCAAccccctggc > 2:962532/1‑138 (MQ=255) tCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCACTGTGATGCCAAGCAACCCCATTGc > 2:641249/1‑143 (MQ=255) ccGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCg > 1:752630/1‑143 (MQ=255) | CCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTA‑AAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTATGGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCG > NC_000913/4274600‑4274880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |