| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,549,932 | T→A | 5.8% | intergenic (+222/+21) | fimH → / ← gntP | type 1 fimbriae D‑mannose specific adhesin/fructuronate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,549,932 | 0 | T | A | 5.8% | 194.8 / 4.1 | 70 | intergenic (+222/+21) | fimH/gntP | type 1 fimbriae D‑mannose specific adhesin/fructuronate transporter |
| Reads supporting (aligned to +/- strand): ref base T (35/30); new base A (2/2); total (37/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.80e-01 | |||||||||||
AGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCAAAGTAACCTTTGAACAAC > NC_000913/4549790‑4550073 | aGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGGCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAt > 1:955146/1‑143 (MQ=255) gACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCAACAGTCTGAGGCTGCCATTGGCAg > 1:389641/1‑143 (MQ=255) aCGTGTCAGCGTTGTATTTGGTATAAACAAAGCGCACTTTGCAGGGCTGTTCCCCTCAACCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAgg < 1:944719/143‑1 (MQ=37) aCGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTTCCCTCACCCCAACGATATTGCCACACTGCCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAgg > 1:779307/1‑143 (MQ=255) aCGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAgg < 2:380362/143‑1 (MQ=255) aCGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAgg < 1:1003601/143‑1 (MQ=255) aCGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAgg > 2:886396/1‑143 (MQ=255) aCGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACACTCACCCTCTCCTCGGAGGGGCGCGGGGACTGTCCGGGCACATTTTTAGACGTTGTCATCAGTATGAGCTGGCCATGGGCggg > 1:952084/1‑143 (MQ=255) gcgTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGct > 2:608291/1‑143 (MQ=255) gTCAGCGTGGCATCTGGCATGAACAAAGCGCGCTTTGCTGGGCTGTTCCCCTCACCCTAGCCCTCTCCGCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctca < 2:367231/143‑2 (MQ=38) gTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctca < 1:114861/143‑2 (MQ=255) gTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATGTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGctct > 1:772114/1‑143 (MQ=255) cAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGAATTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTgg > 1:981287/1‑143 (MQ=255) tCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGTATTTGTCGCCAACCTGAGCCTGCCATTGGCAGGCTCTGGTGTcc > 2:748012/1‑143 (MQ=38) cATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCttt < 1:486202/143‑1 (MQ=255) tCTGGCCTCAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTCGCCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTa < 2:49780/143‑1 (MQ=255) aTAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGCCTGTCCGGGCACATTTTTAGACTGTGTCATCAGTCTCAGCCTGCCATTGGCAGGCTCTGGTGTCCGTTTACGCTAc > 2:944732/1‑143 (MQ=255) aTAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTAc > 1:312564/1‑143 (MQ=255) aTAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCAGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTCCGCTag > 1:110932/1‑142 (MQ=255) gaaaGCGCACTTTGCTGGTCTGTTCCCCTCCCCCTAACCTTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGc < 2:456961/142‑1 (MQ=255) cAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCGCATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTTGCAGGCTCTGGTGTCCTTTTACGCTAACATGc > 1:263088/1‑143 (MQ=255) cAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCACGGAGGGGCGAGGGGGCAGCCCGGGCACATATTTAGACTTTGTCATCAGACTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGc > 2:424471/1‑143 (MQ=255) aggctcACTTTGCTGGTCTGTTCCCCTCGCCCTAACCCTCTCCCTGGAGGGGCGAGGGGACTGTCCCGGCACATTCTTAGACTTTGTCATCAGTCTCCGCCTGCCATTGGCAGGCTCTAGTGTCCTTTTTCGCTACCATGCta < 2:204104/138‑1 (MQ=255) cTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCa < 1:608291/143‑1 (MQ=255) tttGCTGCTCTATTCCCCGCACCTTAACCCTCTCCCCGGAGGGGCGAGGGTACTGTCCTTTCACATTTTTATACTTTTTTATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAg < 1:141278/143‑1 (MQ=255) tGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGCCTGTCCGGGCACACTTTTCGACTTTGCCATCAGTCTGAGCCTGCCATTGCCAGGCTCTGGTGCCCTTTTACGCTCCCATCCTAATAATCAGCACaa > 2:1049884/1‑143 (MQ=38) tGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACaa > 1:382411/1‑143 (MQ=255) tGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCATCATCAGGTACCATGCTAATGATCatcgtct > 1:1049624/1‑137 (MQ=37) tCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACaataa < 1:748012/143‑1 (MQ=255) ttCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTCTTAAACTCCGCGCCTAACAATTACCACAAGAATCAg > 2:630363/1‑143 (MQ=25) ccactcccTAACCCTCTACCCGGTGTTGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCa < 1:1049081/138‑1 (MQ=255) caaccTAACCCTCTCCCCCGACGGGCGAGGGGACTGTCCGGGCACATTTTTAAGCTTTGTCATCTGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAAcc < 2:65436/140‑1 (MQ=255) aCCCTAACCCTCCCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCa < 1:58992/143‑1 (MQ=255) cccTAGCCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTCCGCTACCATGCTAATATTCAGCACAATAAGCAGCCCAACCAc < 2:333054/143‑1 (MQ=255) cccTAACCCTCTCCCCGGTGGGGCGATGGGTCTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATGGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCAc < 1:506984/143‑1 (MQ=255) ccTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACg > 1:1065355/1‑143 (MQ=255) tAACCCTCTCCCCGGAGGGTCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGa > 2:872735/1‑143 (MQ=255) ctcCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGAcc < 1:477736/143‑1 (MQ=255) cgccGGCGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAg < 2:411871/141‑1 (MQ=255) ccGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCGCAACCACGGAGTTGACCAGCt > 1:30026/1‑143 (MQ=255) gCGAGGGGACGGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGa < 2:544947/143‑1 (MQ=255) gAGGGGACTGGCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGAcc < 2:344447/143‑1 (MQ=255) tGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTCATAATCAGCACCATACTCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGCCCCCAGGttt < 1:1025086/143‑1 (MQ=255) tGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGttt > 1:515841/1‑143 (MQ=255) tCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTc > 1:1017333/1‑143 (MQ=255) tCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACAATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTc > 1:1057909/1‑143 (MQ=255) gCACATCTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACgt < 2:382411/143‑1 (MQ=255) aTTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCt > 1:920622/1‑143 (MQ=255) tttAGACTTCGTCATCCGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCtttt < 1:903353/143‑1 (MQ=255) ttAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAACACAATAATCAGCCCAACCACGCAGTTTACCAGATGCGACAGACCCCAGGGTGTCAACGTGTCgttca > 2:916895/1‑141 (MQ=255) tAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTAc > 1:945517/1‑143 (MQ=255) aGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACt < 1:886396/143‑1 (MQ=255) gACTTTGTCATCAGTCTGAGCCTGCCATTAGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGGCTTCAACGTGTCtttgagcg > 2:272010/1‑138 (MQ=255) aCTTTGTTATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTTCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCTCAACCACGGAGTTGATCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGa < 2:981287/143‑1 (MQ=255) tttGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACa > 1:424024/1‑143 (MQ=255) tttGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACa > 1:197864/1‑143 (MQ=255) tttGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCACAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTGTCCACGGGACCTGTACTgccc > 2:730628/1‑140 (MQ=255) ttGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAg < 2:1017333/143‑1 (MQ=255) tcaGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCaaa < 2:779307/143‑1 (MQ=255) tcaGTCTGAGCCTGCCAGTGGGAGGCTCTGTGGGCCTGTTACGCTACCATGCTAGTAATCAGCGCAATACTCAGCGCATCCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCaaa < 2:829623/143‑1 (MQ=255) aGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGCCCCCAGGTCTTCCACGTACATTGTCCCGACAGGTCAAAGt > 2:687344/1‑143 (MQ=255) accagAGCCTGCCAATGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCAAAGTa > 1:810946/5‑143 (MQ=255) cTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCAAAGTAAc < 1:300018/143‑1 (MQ=255) gAGCCTGCCAATGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGATTTTCAACGTGTCTTTTACTGACCGGTCAAAGTAACCt > 2:202929/1‑143 (MQ=255) cTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCAAAGTAACCTTTGa < 2:145528/143‑1 (MQ=255) gCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCCGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCACCGTGTCTTTTACTGACACGTCAAAGTAACCTTTGacc > 2:877850/1‑141 (MQ=255) ccATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAAGCAGGTAGTTGACCATCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGCCAAAGGAACGTTGGaaca > 1:346764/1‑143 (MQ=255) cATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCAAAGTAACCTTTGaacaa > 1:511030/1‑143 (MQ=255) aTTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCAGGGAGTTGACCAGCTCCAGCAGACCCCAGGTGTTCAACGTGTCTTTTACGATCAGGTCCACGTAACCTTTGaacaac > 2:1063148/1‑143 (MQ=255) aTTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCAAAGTAACCTTTGaacaac < 2:312564/143‑1 (MQ=255) aTTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCAAAGTAACCTTTGaacaac < 1:50305/143‑1 (MQ=255) | AGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTCAACGTGTCTTTTACTGACAGGTCAAAGTAACCTTTGAACAAC > NC_000913/4549790‑4550073 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |