mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4397477 = | 99 (1.810) | 3 (0.060) | 3/252 | NT | 3.2% | coding (66/1848 nt) | mutL | DNA mismatch repair protein MutL |
| ? | NC_000913 | 4397526 = | 85 (1.620) | coding (115/1848 nt) | mutL | DNA mismatch repair protein MutL | |||||
| * | ? | NC_000913 | 4288222 = | 106 (1.930) | 3 (0.060) | 3/254 | NT | 3.0% | coding (459/1437 nt) | nrfA | cytochrome c552 nitrite reductase |
| ? | NC_000913 | 4288251 = | 89 (1.690) | coding (488/1437 nt) | nrfA | cytochrome c552 nitrite reductase | |||||
| * | ? | NC_000913 | 4286330 = | 85 (1.550) | 4 (0.070) | 3/260 | NT | 4.4% | coding (1042/1959 nt) | acs | acetyl‑CoA synthetase (AMP‑forming) |
| ? | NC_000913 | 4286367 = | 90 (1.670) | coding (1005/1959 nt) | acs | acetyl‑CoA synthetase (AMP‑forming) | |||||
| * | ? | NC_000913 | = 4058302 | 109 (1.990) | 4 (0.080) | 4/246 | NT | 3.6% | intergenic (‑268/‑105) | glnA/bipA | glutamine synthetase/ribosome‑dependent GTPase, ribosome assembly factor |
| ? | NC_000913 | = 4058333 | 110 (2.150) | intergenic (‑299/‑74) | glnA/bipA | glutamine synthetase/ribosome‑dependent GTPase, ribosome assembly factor | |||||
| * | ? | NC_000913 | 3854880 = | 105 (1.910) | 4 (0.080) | 4/246 | NT | 4.0% | coding (959/1185 nt) | emrD | multidrug efflux pump EmrD |
| ? | NC_000913 | 3854940 = | 93 (1.820) | coding (1019/1185 nt) | emrD | multidrug efflux pump EmrD | |||||