New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2729630 =	NA (NA)	11 (0.270)	10/274	2.9	NA	noncoding (1528/1542 nt)	rrsG	16S ribosomal RNA
	?	NC_000913	2729652 =	NA (NA)					noncoding (1506/1542 nt)	rrsG	16S ribosomal RNA

GTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCG  >  NC_000913/2729488‑2729698                                                                                                                                               |                                                                     gTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTCAAGGTAAGGAGGTGATCCa                                                                      >  2:538717/1‑143 (MQ=255)      cTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTTTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGc                                                                 <  1:660221/143‑1 (MQ=255)      cTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGc                                                                 >  1:747651/1‑143 (MQ=39)       tctccttAATAGCAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCa                                                                <  2:426339/138‑1 (MQ=255)         tCATTAATAGAGAGCGAACGGCCTTATTCTCTTCAGCCGCACTCCCGCCGCGTAAACACCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAgg                                                              <  1:358904/143‑1 (MQ=14)         tCATTAATAGAAAGCGAATGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCTTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCATTGCAAAGTACGCTTCTTTAAGGTAAGGATGTGATCCAACCGCAgg                                                              <  2:13428/143‑1 (MQ=255)              aacaGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTccc                                                         <  2:777204/140‑1 (MQ=255)                 cgcaaGCGGTCGGCCTGGTGCTGTTCGGCCTCAGTGCCAACGGGTAGGCGCCTTGCTATTCGCTTTTGATCAGGCGAGCTGTGGGAGAACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTa                                                      <  2:753906/140‑1 (MQ=2)                 aGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGGGTTGCTATTCACTTTTCATCAGACAATCTGTGGGAGCCGCGAAAAGTACCCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTa                                                      >  2:721499/1‑143 (MQ=14)                  gAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGCGGTGATCCCGCGGCACGGTCCGCTAc                                                     >  1:202818/1‑143 (MQ=14)                     aGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGt                                                  >  1:728913/1‑143 (MQ=255)                      gCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGtt                                                 <  1:688089/143‑1 (MQ=40)                            ggCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTg                                           <  1:295469/143‑1 (MQ=255)                                       ctTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCa                                <  1:639431/143‑1 (MQ=39)                                         tCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCAcc                              <  1:266756/143‑1 (MQ=40)                                           aGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCACTACGGTTACCCTGATGCGACTCCAcccc                            >  2:84954/1‑143 (MQ=14)                                                   tCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGa                    >  1:121435/1‑143 (MQ=255)                                                   ccccAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGa                    <  1:312468/142‑1 (MQ=255)                                                      cAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTGAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTATGGTTACCTTGTTCCGACTTCACACCAGTCACGaagc                 >  2:749607/1‑141 (MQ=14)                                                       accgcgTAAACGCCTGGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATca                <  1:482135/141‑1 (MQ=255)                                                            gTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTGCCCTACGGTTACCTTGTTACGACTTCACCCCATCAATGAATCACAAAg           >  1:786282/1‑143 (MQ=255)                                                                  gCCTGGCTATTCACTGTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTaa     <  1:321721/143‑1 (MQ=255)                                                                     tttcTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAgcg  <  1:316663/140‑1 (MQ=25)                                                                                                                                               |                                                                     GTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCG  >  NC_000913/2729488‑2729698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.