| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4171607 | 77 (1.140) | 16 (0.250) | 9/270 | 6.1 | 17.8% | intergenic (+63/‑30) | rrlB/rrfB | 23S ribosomal RNA/5S ribosomal RNA |
| ? | NC_000913 | = 4213022 | NA (NA) | intergenic (+76/‑18) | rrlE/rrfE | 23S ribosomal RNA/5S ribosomal RNA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4171461‑4171607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagaCCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGC < NC_000913/4213022‑4212881 AGACGACGACTTTCATGTGCCGTGTGTTTAATCGCATCGATGCGTTGAGCTAACCCGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCTAAGCTTTTTTTGCGGA‑T‑TATAGAAGATTTTCAGCCTGATACAGATTAAAT < 2:817885/143‑1AGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTTAGCTAACCGGTACTAATGATCCGTGCGGCTTAACAATACAAAGACAAAACTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAAT > 1:340544/1‑143AGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGCGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑AAGAGAAGAATTTCGGCCCGATACAGATTAAAT > 2:801168/1‑143AGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACATTACAACGCCGAAGCTGATTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAAT > 1:493440/1‑143AGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACAGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGAGTTTCAGCCTGCTACAGATTAAAT > 2:709947/1‑143 gcttACGAGGTTGGTAGGCCTGGTGTGTAAGCGCAGCTATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACATCGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATC < 2:375617/139‑1 gaccatGACGTTGATAGGCCGGGTTTGTAATCGCATCGATGCGTTGAGCTAAACGGTACTAATAAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATC < 1:311463/137‑1 GACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATC > 1:668225/1‑143 GACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTATAGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATC > 1:293370/1‑143 ACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCA < 2:155263/143‑1 cgtggggGTTGCTAGTGCGTGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAG < 2:796016/136‑1 GACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGACGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATAAGA > 1:625409/1‑143 ACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAATCGGTACTAATGACACGTGAGGCGTAAACTTACTAGGCCGAAGCTGTTTTGGCGGA‑T‑GGGAGAAGATTTTTCGCCTGATACAGATTAAAGCAGta > 2:481752/1‑141 CCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAATCGGTATTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCT < 1:218270/143‑1 CCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGTACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCT < 1:1151128/143‑1 ctgcTGTTTAAGCGCTGCTATGCGTTGAGCTAACCGGTACTAATGAACCGCGAGTCTTAACCTTACAACGCCGAAGCTGTTTTGGCTGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTG < 2:133145/139‑1 GGGTGTCTACGCGCATCGATCCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA < 2:737330/143‑1 GGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGATCCGTGAGGCTTAACCTTACAACGCTGAAGCTGTTTTGGCGGATT‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA < 1:50294/143‑1 GGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATT‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA < 1:717788/143‑1 GGTGTGGAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATT‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA < 1:724256/143‑1 gctttTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATT‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT < 2:36291/138‑1 GTGTGTAAGCGCAGCTATGCGTTGAGCTAACCGGTACTAATGATCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATT‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT < 1:1110601/143‑1 TGTAAGCGCGGTGATGCGTTGAGCTAACCGGTACTAATGAATCGTGAGGCTTAACCTTACAACGCCGATGCTGTTTTGGCGTA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGATCGCTTCTGCGTTCTGATTTAA < 2:306954/143‑1 AAGCGCAGCGATGCGTTTAGCTAACCGGTACTAATGAACCGTGAGGCTTAACTTTACAACGCCGAATCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGAGACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCT < 1:1000499/143‑1 AAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGATCCGTGAGGCTTATCCTTACAACGCCGAAGCTGTTTTGGCGGATT‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGTCTGCTTCTGCGTTCTGATTTAATC < 1:916925/143‑1 AGCGCAGCGATGCGTTGAGCTAACCGGTACTAAGGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGA‑TGGAGAGAAGATTTTCAGCCAGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCT < 1:669690/143‑1 AGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATT‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATC < 1:152742/143‑1 GA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA > 1:969220/1‑57 GA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA < 2:969220/57‑1 ttctATCACACCGCTTCTGCTTTCTGATTTAATCTGTATCAGGCTGAAAATCTGCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTAC < 2:780605/139‑1 ttTCAGTCCGCTTCTGATTTGTCATTTAATCGGGAACAGGCTGAAAATGTTCTCTCAATCCGCCAAAACACCTGCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACA < 1:400027/141‑1 CAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTCCATTAGCACCGGTTAGCTCAACGCATCGCCGCGCTTACACACCC > 2:1133012/1‑143 CAGACCGATTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCC < 2:65348/143‑1 ACCGCTTCTGCGTTCTGATTTAATCTGTATCATGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGC < 1:375494/143‑1 AGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑T‑GAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4171461‑4171607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagaCCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGC < NC_000913/4213022‑4212881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |