New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3946688135 (1.990)16 (0.250) 9/270 6.1 11.0% intergenic (+81/‑12) rrlC/rrfC 23S ribosomal RNA/5S ribosomal RNA
?NC_000913 = 4171601 NA (NA)intergenic (+57/‑36) rrlB/rrfB 23S ribosomal RNA/5S ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 137 total aligned reads displayed.

GGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCA  >  NC_000913/3946546‑3946830
                                                                                                                                              |                                                                                                                                              
 gtgtgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAGGATGATTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAAGGCAGAAGCGGTAcgatg                                                                                                                                               >  2:961791/1‑143 (MQ=11)
 gtgtgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAGATCAGAACGCAGAAGCGGTCtgatg                                                                                                                                               <  1:1211073/143‑1 (MQ=17)
 gtgtgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCAGTctgctg                                                                                                                                               >  2:696617/1‑143 (MQ=17)
 gtgtgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAACTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatg                                                                                                                                               <  1:1108871/143‑1 (MQ=18)
   gtgtTAGCGCAGTGAGGCGTTGAGCTAAACGGTACTAATGAGCCGTGAGGCTTAACGTTACTACGCTTTAGGTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGaa                                                                                                                                             <  2:75143/143‑1 (MQ=11)
    tggaaGCGCAGCGATGGGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGTCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGaaa                                                                                                                                            <  2:1246189/140‑1 (MQ=255)
     gtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGCAGATGTTATGGCGGATGAGAGAAGATTTTCAGCCTGATACAGAGTAAATCAGCACGCAGAAGTGGCCTGATGaaaa                                                                                                                                           >  2:183549/1‑142 (MQ=11)
     gtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAAGAAAc                                                                                                                                           >  2:625740/1‑143 (MQ=25)
     gtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGAGGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGCTACAGATTAAATCAGAACGCAGAAGCGGTCTGATGcaaa                                                                                                                                           >  2:15949/1‑142 (MQ=12)
      tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGACGAATGAAAGAAGATTTTCAGCCAGATACAGATTAAATCAGAACGCAGAAGCGGGCTGATGaaaaa                                                                                                                                          >  1:656124/1‑141 (MQ=11)
         gcgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATAAGAACGAAGAAGCGGCCTGGTGAAACAGaa                                                                                                                                       >  2:397549/1‑143 (MQ=255)
         gcgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGACGGATGAGAGAAGATTTTCAGCCTGATACAGAATAAATCAGAACGCAGAAACGGTCTGATGAAACAGaa                                                                                                                                       >  1:1257417/1‑143 (MQ=255)
         gcgcAGCGATGCGTTGAGCTAACAGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGaa                                                                                                                                       >  2:449954/1‑143 (MQ=21)
          cgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGCTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAAt                                                                                                                                      >  1:1226477/1‑143 (MQ=21)
           gcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGAACAGATGAAACAAAAta                                                                                                                                     >  1:784368/1‑142 (MQ=11)
           gcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTATGGCGGATGAGAGAATAGTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGACTGATGAAACAGaaat                                                                                                                                     >  2:661989/1‑141 (MQ=255)
            cAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAGCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGGCTGATACAGATTCAATCAGAACGCAGAAGCGGTCTGATGAAACCAAAttt                                                                                                                                    >  2:421674/1‑143 (MQ=11)
              gCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGc                                                                                                                                  <  2:735449/143‑1 (MQ=35)
               cGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATAAGAACGAAGAAGCGGTCTGATGAAACAGAATTTGcc                                                                                                                                 >  1:967075/1‑143 (MQ=21)
                gATGCGTTGAGCTAACCGGTACTAATGAAACGTGAGGCTTAACCTTACAATGTTGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGAGTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCt                                                                                                                                <  1:475062/143‑1 (MQ=11)
                gATGCGTTAAGCTAACCGGCACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCt                                                                                                                                <  2:633366/143‑1 (MQ=21)
                    cGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTAAACATAATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTggcg                                                                                                                            >  1:949105/1‑143 (MQ=255)
                      ttGAGCTAACCGGTACTAATGAATCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCTTATTTGTGAAGATTTTTTTTTTTTTTTAGATTAAATCAGAACGCAGAAGCGGTCGGATGAAACAGAATTTGCCTggcggc                                                                                                                          <  1:454072/143‑1 (MQ=11)
                      ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTggccgc                                                                                                                          >  2:821802/1‑143 (MQ=25)
                          gCTAACCGGTACTAATGATCCGTGTGGCTTAACTTTACAAGGCAGAAGATGTTTGGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTa                                                                                                                      <  1:748698/143‑1 (MQ=11)
                               caggcaCTCATAAACCGTGAGGCTTAACCTTACAACGTCGAAGATGTTTCGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGcgcg                                                                                                                 <  2:81670/138‑1 (MQ=11)
                                cGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAAAAGCGGTCTGATGAAACAGAATTTGCATGGAGGTCGTAGCGCgg                                                                                                                >  1:223246/1‑143 (MQ=255)
                                 ggTACTAATGAACCGTGAGGCTTAACCTTACAACGCAGAAGATGTTTTGGCGGATGAGAGAAGATATTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggt                                                                                                               <  1:192907/143‑1 (MQ=25)
                                  gTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtg                                                                                                              >  2:379900/1‑143 (MQ=35)
                                      tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTcc                                                                                                          >  1:751124/1‑143 (MQ=34)
                                      tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGACCGTAGCGCGGTGATcc                                                                                                          >  2:628048/1‑143 (MQ=25)
                                      tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAAAAGAATTTGATTAGCAGACAAAGCGCGGTGGTcc                                                                                                          >  1:154884/1‑143 (MQ=11)
                                      tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGACGAAACAGAATTTGGCGGGAAGCCGTAGCGCGGTGGTcc                                                                                                          >  2:288464/1‑143 (MQ=11)
                                         tgcaCCGTCATGCGTATCCTTATAGCGTCGATGATGGTTTGGCGTCTGAGAGACGATTTTTAGCCTGATTCAGATTAACTCACAGCGCAGTAGCGCTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc                                                                                                       <  2:893530/140‑1 (MQ=2)
                                         tGAACCGTGCGGCTTAACCGTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc                                                                                                       <  2:233701/143‑1 (MQ=25)
                                         tGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGGCTGATGAAACAGAATTTGCCTGGCGGCGGTAGCGCGGTGGTCGCAc                                                                                                       >  2:133723/1‑143 (MQ=255)
                                           ccccGTGAGGCTGAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGACTGCCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCt                                                                                                     <  2:583952/141‑1 (MQ=255)
                                           aaCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCt                                                                                                     >  2:837534/1‑143 (MQ=35)
                                             ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGCGAAGATTTTCAGCCTGATACACATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGa                                                                                                   >  1:136415/1‑143 (MQ=25)
                                              cGTGAGGCTTAACCTTACAACGGCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACATATTAAATCAGAACGTAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAc                                                                                                  <  1:771651/143‑1 (MQ=255)
                                               gTGAGGCGTAACCTTACTACGCCGAAGATGTTTTGGCGGATGAGAGAAGGTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcc                                                                                                 <  2:74503/143‑1 (MQ=255)
                                                tGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGCTTAAATCAGAACGCAGAAGCGGTCTGATGAAAAAGAATTTGCCTGGCGGACGTAGCGCGGTGGTCCCACCTGAccc                                                                                                >  1:1138319/1‑143 (MQ=255)
                                                 ggggCTTAGTCTTGCGACGTCGAAGAGGTGTTGGCGGGTGAGAGGAGATTTTCAGCCTGATACAGATTAAATGAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGTGCGGTGGTCCCACCTGAcccc                                                                                               <  2:137402/141‑1 (MQ=11)
                                                 gAGGCTTAACCTTACAACGCTGAAGATGTTTTGGCGGATTAGAGAAGATTTTCAGCCTGATACAGATGAAATCAGAAGGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcccc                                                                                               <  1:798592/143‑1 (MQ=255)
                                                 gAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcccc                                                                                               <  2:781306/143‑1 (MQ=35)
                                                    gCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAAAAGCGGTCTGATGAAACAAAATTTGACTGGCGGCCGTAGCGCGGTGGTCACACCTGACCACATg                                                                                            >  1:1155769/1‑143 (MQ=11)
                                                     gttAACCTGACAACTCCGAAGATGTTTTGGCGGATGTGTGAAGATTTTCAGCCTGATACAGATTAAATCAGAGCGCAGAAGCGGTCTTATGAAACAGAATTTGCCTGGCGGCCGTAGCGTGGTGGTCCCACCTGACCCCATGc                                                                                           <  2:436143/142‑1 (MQ=11)
                                                     cTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGc                                                                                           <  2:61783/143‑1 (MQ=35)
                                                      ttAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGCAGCGGTCTGATGCAACAGAATTTGCCTGTCGGCCGTAGCGCGGTGGTCCCACATAACCACATgac                                                                                          >  1:835646/1‑141 (MQ=11)
                                                      ttAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGcc                                                                                          >  2:986727/1‑143 (MQ=35)
                                                      ttAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCCCGGTGGTCCCACCTGCCCCCATGcc                                                                                          >  2:524186/1‑143 (MQ=25)
                                                         aCCTTTCAACGCCGAAGATGTTTTGTCTGAGCAGAGAACATTTTCAGCCTGATACAGATTAAATCAGAACGCAGTATCTGTCTGATGAAACACAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGaa                                                                                       <  2:963947/143‑1 (MQ=11)
                                                          ccTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAAc                                                                                      <  1:151580/143‑1 (MQ=34)
                                                          ccTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGACGAAc                                                                                      >  2:1033090/1‑143 (MQ=25)
                                                            ttACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGCTTTTCCGCCTGATACAGATTAAATCAGAACGCAGAAACGGAAAGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAAATc                                                                                    >  1:17971/1‑143 (MQ=11)
                                                            ttACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTc                                                                                    >  1:1061814/1‑143 (MQ=35)
                                                                aaCTCCGAAGATGTTTTTGCTGATGAGAGAAGATTTTCATCCTTATACATATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATCCGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa                                                                                <  1:980668/143‑1 (MQ=11)
                                                                aaCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGGAGCGGTCTGATGACACAGAATTTGCCTGGCGGCCGTAGCGCGGTGATCACACCAGAACACATGCCGACATCAGaa                                                                                >  1:349559/1‑143 (MQ=11)
                                                                aaCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGTTCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa                                                                                <  1:330579/143‑1 (MQ=21)
                                                                aaCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa                                                                                <  1:429116/143‑1 (MQ=35)
                                                                aaCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa                                                                                <  1:1066843/143‑1 (MQ=35)
                                                                aaCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTAGCGGCCGTAACGCAGAGATCCCACCTGACACCATGCCGAACTCAGaa                                                                                >  1:83153/1‑143 (MQ=11)
                                                                aaCGCCGAAGATGGTATGCCTGCTGAGAGAAGATTTTCAGTCTGATACAGAGTAAATCAGAGCGCAGAGGAGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa                                                                                <  1:155737/143‑1 (MQ=11)
                                                                 aCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCACACCTGACCCCATGCCGAACTCAGAAg                                                                               >  1:726387/1‑143 (MQ=25)
                                                                     cGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTACCTAGCAGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa                                                                           >  1:1183464/1‑143 (MQ=255)
                                                                      gaggttGTTTTGTCGGGTGAGAGATACTTTGCAGCTTCATACAGATTCAATCAGAACGCAGAGGCGGTCTGATGAACCAGAATTTGCCTGGTGGCCGTAGCTCGTTGGTCCCTCCTGCCCCCATGCCGAACTCAGAAGTGaaa                                                                          <  2:273378/138‑1 (MQ=11)
                                                                         gATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGc                                                                       >  1:591715/1‑143 (MQ=33)
                                                                             tttgGGCGGAGGAGAGAAGATTTTCGGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa                                                                   <  1:416509/143‑1 (MQ=12)
                                                                             ttgtGGCGGATTAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCTGTCTTATGAAACATAATTTGTCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa                                                                   <  1:568717/140‑1 (MQ=11)
                                                                             ttgtGGCGGATGAGAGAAGATTTTCATCCCTGTACGGAGTAGATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa                                                                   <  2:935530/140‑1 (MQ=11)
                                                                              tttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGTCTGGCGGCCGGCGGGCGGTGGTCCCACCTGACCCCACGCCGAACCCAGCAGCGAAacgacgacg                                                                  >  2:797505/1‑140 (MQ=11)
                                                                                 ggCGGATGAGAGAAGATTTTCAGTCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgcgc                                                               <  1:891229/143‑1 (MQ=17)
                                                                                 ggCCGATGAGAGACGATTGTCAGGCGGAGAGGGATGAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgcgc                                                               <  2:1153699/143‑1 (MQ=11)
                                                                                     gATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCTCACGCCGAAACAAGAAGTGAACACCCGTCGCGcccag                                                           >  2:940639/1‑140 (MQ=11)
                                                                                         atagaagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTa                                                       <  2:982342/141‑1 (MQ=17)
                                                                                            gaagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAgtg                                                    >  2:1047287/1‑143 (MQ=32)
                                                                                             aagaTTTTCAGCTTGATACATATTAAATCAGAACGCAGAAGCTGTCTGATGAAACAGTATTTGTCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAgtgt                                                   <  1:1091484/143‑1 (MQ=11)
                                                                                             aagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGAAGGAAgtgt                                                   >  1:874258/1‑143 (MQ=17)
                                                                                             aagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGACTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTGAGAAGTGAAACGCCGTAGCGCGGATGATAgtgt                                                   >  2:784952/1‑143 (MQ=255)
                                                                                                aTTTTTAGTCTGATACAGATTAAAACAGAACGCAGAAGCGGTCTGATGAAACAGAATGTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTggg                                                <  1:245410/143‑1 (MQ=255)
                                                                                                aTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTGGCGCGGTGGTCCCACCTGCCCCCATGCCGAACCCAGAAGGGAAACGCCGTAGGCCCGATGGCAGTGAggg                                                >  2:693529/1‑143 (MQ=11)
                                                                                                aTTTGCAGCCGGATAGAGAGTAGATCAGAACGATGCAGGCTGCGTATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGGCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTggg                                                <  2:1222532/143‑1 (MQ=11)
                                                                                                  ttttatccTGATACAGATTAAATCAGAACTCAGAAGCGGTCTGATGAAACAGAATGTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGt                                              <  1:918289/137‑1 (MQ=255)
                                                                                                        ccTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGAGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTcccc                                        >  1:231743/1‑143 (MQ=17)
                                                                                                             tACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTATGGGGGCTCCCCAcgcg                                   >  2:494464/1‑143 (MQ=12)
                                                                                                                aGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATACAGAACTAAAAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGAGGTCTCCCCATGCgatc                                >  1:496600/1‑141 (MQ=11)
                                                                                                                   ttAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCACGCCGAACTCAGAAGAGAAACGACGGAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGCGTa                             >  1:117412/1‑143 (MQ=11)
                                                                                                                     aaaTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAgg                           <  2:1246740/143‑1 (MQ=32)
                                                                                                                       aTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACACCGTAGCGCCGATGGCAGTGTGGGGTCTCCCCAAGCGAGAGTAGGGa                         >  1:1032766/1‑143 (MQ=12)
                                                                                                                           gAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGGTGGTAGTGTGGGGTGGCCCAAAGCGAGCGGAGGGAACTg                     >  2:573342/1‑143 (MQ=11)
                                                                                                                            aaCGGAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCACACTTGATCCTATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGc                    <  1:696617/143‑1 (MQ=11)
                                                                                                                              cgcgGAAGCGGGCTGATGGAACAGGATTTGCCTGGCGGTCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCa                  <  2:655898/143‑1 (MQ=11)
                                                                                                                              cGCAGATGCTGTCTGATGATTTAGAATTTGCCTGTCGGCCGTAGCGTGGTGGTTCCACCTGACCCCATGCCGAACACAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCa                  <  1:379900/143‑1 (MQ=11)
                                                                                                                              cGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCa                  <  1:686075/143‑1 (MQ=32)
                                                                                                                               gCAGAAGCGGTCTTATGAAACAGCATTTGCCGGGCGCCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCCAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAg                 <  2:1060513/143‑1 (MQ=11)
                                                                                                                                cAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCTGCCGTAGCTCGTTGGTCCCACTTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAgg                <  1:642142/143‑1 (MQ=255)
                                                                                                                                    aGCGGTCTGATGAAATATAATTTGCCTGGCGGTCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATc            <  1:1207776/143‑1 (MQ=12)
                                                                                                                                            gatgaAACAGAATTTGCCTGGCGGCCGTACTGCGTTACTCCCACTTGACCCCATGCCGAACTTAGAAGTGAAACGGCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAg    <  1:615866/143‑1 (MQ=11)
                                                                                                                                             atgaAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCATAAGTGAAACGCTGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGc   <  1:625740/143‑1 (MQ=17)
                                                                                                                                             atgaAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGCAGAGTGGGGTCTCCCCACGCGAGAGGAGAGGACGGCCAGGCATCAAACTAAga   >  2:1153512/1‑142 (MQ=11)
                                                                                                                                              |                                                                                                                                              
GGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCA  >  NC_000913/3946546‑3946830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.