Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp insB9[crl] insB9, insA9, [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908–258673 258683 11–776 74 [0] [0] 74 insB9–[crl] insB9,insA9,[crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)66 (1.130) 54/266 0.0 100% intergenic (+8/+16) crl/insB9 RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl RNA polymerase holoenzyme assembly factor Crl

AACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/257758‑257907
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGG  >  NC_000913/258684‑258825
                                                                                                                                                                                                                                                                                                    
AACGTTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGAAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT                                                                                                                                                       <  2:211176/143‑1
AACGCTGGGGTTAAGAATTTGCTAAATGTTGCCAATGTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT                                                                                                                                                       <  2:947182/143‑1
   GCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA                                                                                                                                                    <  2:593887/143‑1
   GCTTATGTTAAATATTTACTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGATATAGCAATGACGTTACCGAGTCCACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA                                                                                                                                                    <  2:1737/143‑1
    gTTGGGTTAAAAATTTGCTAAATTTTGCCAACTTGGTAAAACAGTTGCAGCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG                                                                                                                                                   <  2:597318/142‑1
    CTTGTGATAAACATTTGCTAAATTCTGCCAATATGGTAAAACAGTTGCATGACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG                                                                                                                                                   <  2:992519/143‑1
     TTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG                                                                                                                                                  >  1:1035452/1‑143
      TGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT                                                                                                                                                 >  1:984076/1‑143
          TTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT                                                                                                                                             >  1:621740/1‑143
            AAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGCTTGATCAAAAAATTTACCGCACTCGGCCCGCATATTCGTGAAGGTAACTGC                                                                                                                                           >  2:839218/1‑143
             AAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAACCTTTCCCGCACTAGGCCCGTATATTCGTGCAGGTAAGTGCA                                                                                                                                          >  1:209057/1‑143
              AAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGCGCAGATTGATCAAAAAATTTACCGCACTAGGCACGTATATTCGTGAAGGTAAGTGCAA                                                                                                                                         >  1:133931/1‑143
               cATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA                                                                                                                                        <  1:249797/142‑1
               AATTTGCTAAATTGTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCATTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA                                                                                                                                        <  1:398956/143‑1
                    gtTAAATTTTGCCAATTTGGTAAAACAGTTGAATCATAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA                                                                                                                                   <  1:891568/141‑1
                     CTAAATTTTCCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGACTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT                                                                                                                                  <  2:209820/143‑1
                     CTAAATGTTGCCAATATGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT                                                                                                                                  <  1:850867/143‑1
                     CTAAAGTTTGGCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT                                                                                                                                  <  2:661369/143‑1
                      TAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTCCCGCGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTAACGCACTAGGCCAGTATATTCATGAAGGTACGTGACACGATAATC                                                                                                                                 >  1:244326/1‑143
                        AATTTTGCCACTTTGGTAAAACAGTTGCATCCGAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGCAGAGCAGATTGATCAAAAAATTTTCCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA                                                                                                                               <  2:412660/143‑1
                        AATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA                                                                                                                               <  2:306704/143‑1
                                gAATTGGGTAAAACAGGTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT                                                                                                                       <  2:669735/142‑1
                                caagtgGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT                                                                                                                       <  1:970861/137‑1
                                CAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCGGAAAAAGATAGTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTCAGTGCATAGATATTCGTTTCTTGTT                                                                                                                       >  1:429472/1‑143
                                   TTTGGTAAAACAGTTGCATCACAACAGGAGAGAGCAATGACGTTACCGAGTGCACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGA                                                                                                                    <  1:337631/143‑1
                                          AAACAGGTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG                                                                                                             <  2:877111/143‑1
                                            ACAGTTGCATCACAACAGGAAATAGCAATGACGTTACCGAGTGGACACCCGAAGAGAAGATTGATCAAAAAATTTACCGCACTAAGCCCGTATATTCGTGAAGGGAAGTGCAAAGATAATCGATTATGTATCGATTGTCTGGa                                                                                                           >  2:338712/1‑142
                                              AGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG                                                                                                         >  1:270175/1‑143
                                              AGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATCAATCAAAAAATTTACCACACTAGGCCCGTATATTCACGAATGTAAGTCCAAAGATAATCGATTACTCTTCGATTGTCTAGCTc                                                                                                         >  2:993424/1‑142
                                               GTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATGTACCGCACTAGGCCCGAATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCATTTTCGGTTGTCTGGCTGg                                                                                                        >  2:951651/1‑142
                                               GTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGGGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGT                                                                                                        <  1:714068/143‑1
                                                TTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA                                                                                                       >  2:138510/1‑143
                                                    ATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG                                                                                                   >  1:826448/1‑143
                                                    ATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGAATATTATTCGATTGTCTGGCTGTATGCG                                                                                                   >  2:277684/1‑143
                                                     gCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT                                                                                                  <  2:717475/142‑1
                                                           CAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTCGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATGGCTTCTTTTTCGATTGTCTGGCTGTACGCGTCAACGT                                                                                            >  2:914960/1‑143
                                                                GATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATGGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATGCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAC                                                                                       <  1:945625/143‑1
                                                                  TAGCTATGACGTTACGGAGTGGACACCCGAAGAGGAGATTGATCAAAGAATTTACCGCACTAGTCCCGTAGTTTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCG                                                                                     <  2:908685/143‑1
                                                                        TGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCG                                                                               >  2:159380/1‑143
                                                                         GACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAGTCGTCAACGTAAAACCGGCACCGG                                                                              >  2:656325/1‑143
                                                                            GTTACGGAGTGGACACCCGAAGGGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAG                                                                           <  1:1125909/143‑1
                                                                               ACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGC                                                                        <  2:150056/143‑1
                                                                                 CGAGTGGACACCCGAATCGCAGATTGATCAACAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCCATTCCCTTTCGCCGGTCTGGCGGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGT                                                                      <  1:788481/143‑1
                                                                                     TGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAAT                                                                  >  1:799863/1‑143
                                                                                         CACCCGAAGAGCATATTGATCAAAAATTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTG                                                              <  2:726894/143‑1
                                                                                         CACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTTGATGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTG                                                              <  1:51029/143‑1
                                                                                          gCCCGAAGAGCAAATTAATGAAAATATTTACCGCACTAGGCCCGTATATTCGTGAGGGTAAGTGCAAAGATAATCTACTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGG                                                             <  1:302974/142‑1
                                                                                          ACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGG                                                             >  1:584721/1‑143
                                                                                          ACCCGAAGAGCAGATTGATCAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGACACCGGCACCGGAAGTGCGTGAATTCTGGG                                                            >  2:798650/1‑143
                                                                                            CCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATGATCGCTTCTTTTTCGATTGTCTGACTGTATGCGGCAACCTGCAACCGGCCCCGGCAGTACGCGCATTCTTGGa                                                           >  2:560020/1‑142
                                                                                              GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAGCGGCACCGGAAGTGGGTGAATTGTGGGGCg                                                         >  2:1153563/1‑142
                                                                                               AAGAGCAGATTGATCAAAAAATGTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAACCGAGTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTG                                                        <  2:196550/143‑1
                                                                                                AGAGCAGATTGATCAAAAAATCTACCGCACTAGGCCCGTATCTTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGG                                                       <  2:1036385/143‑1
                                                                                                    CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTGACGGGCGAATTGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGA                                                   >  2:237458/1‑143
                                                                                                       ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGG                                                >  1:232689/1‑143
                                                                                                            TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGGTGGTGGATGGAGCag                                           >  1:645962/1‑141
                                                                                                            TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTG                                           >  1:1094784/1‑143
                                                                                                            TCAAAAAATGTACCGCACTAGGGCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGGTGCTTTCTCGAGTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTG                                           <  2:287682/143‑1
                                                                                                              AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCCCCGGAAGTGCGTGAATGCCGGGGCTGGTGGCTGGAGCTGGA                                         >  2:588174/1‑143
                                                                                                               AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAA                                        >  2:161525/1‑143
                                                                                                                     TTAGCGCACTAGGCACACATATTCGTGAAGGAAAGGGCCACGATAAACGATTCCTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAG                                  <  1:98471/143‑1
                                                                                                                        CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTGTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAA                               <  1:451542/143‑1
                                                                                                                         CGCAGTAGGGCCGGATATTCGGGAAGGTAAGTGCAAAGATAATCGAGTCTGTTTCGATTGTCTGGCTGTGTGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAAT                              <  1:300123/143‑1
                                                                                                                          GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATC                             >  1:563671/1‑143
                                                                                                                             CTAGGCCCGTATATTCGTGAAGGTAAGTGCAACGCTACTCGAGTGTAGTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCG                          >  1:486151/1‑143
                                                                                                                                  CCCGTATATGCGTGAAGGTAAGTGCAAAGCTAGTCGATTCTTTGTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTA                     <  1:857259/143‑1
                                                                                                                                      TATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC                                                                                                               <  1:581478/49‑1
                                                                                                                                      TATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC                                                                                                               >  2:581478/1‑49
                                                                                                                                       tTATTCGTGCAGGTAAGTGCAAGAATAATCGATTCTTTTTCTATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTAC                <  2:133931/142‑1
                                                                                                                                        TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAATGTCTGGCTGTATTCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACA               >  1:485318/1‑143
                                                                                                                                        TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAAAGCCAGGCAATACTCGTTAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACA               <  1:1141860/143‑1
                                                                                                                                        TATGCGTCAAGGTACGTGCAAAGATGATCGATTCGTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACA               <  1:191450/143‑1
                                                                                                                                           TCGTGAAGGTAAGTGCAAAGATAATCGAGTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCAGCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTT            <  2:166433/143‑1
                                                                                                                                            CGTGAAGGTAGGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTA           <  2:1071163/143‑1
                                                                                                                                              TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAAGCCCGGCTTACGTGCAGTTACC         >  2:649349/1‑143
                                                                                                                                               GAATGTAAGGGCAAAGATAATCGCTCCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCA        <  1:355142/143‑1
                                                                                                                                               GAAGGTAAGTTCAAAGATGATCGATTCTTTTTCGATTGTCTGGCTGTGTGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCA        <  2:495065/143‑1
                                                                                                                                                  GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTT     <  1:609336/143‑1
                                                                                                                                                  GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTGTTACCTACAGTTACCAGTT     >  2:298496/1‑143
                                                                                                                                                   GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTT    >  2:976831/1‑143
                                                                                                                                                   GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTAAACGTGAAATCGGCACCGGAAGTGCGTGAATTCGGGGGCTGGTGGATGGAGCTGGAAGCGGAGGAATACAGGCTTAACTCCAACTACCAGTca    >  2:826282/1‑141
                                                                                                                                                     AAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGGTTGG  >  2:252363/1‑143
                                                                                                                                                                                                                                                                                                    
AACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/257758‑257907
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGG  >  NC_000913/258684‑258825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.