New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	566777 =	NA (NA)	2377 (38.520)	273/280	0.0	97.6%	noncoding (1/1258 nt)	IS3	repeat region
	?	NC_000913	= 572471	58 (0.930)					coding (6/456 nt)	ybcN	DLP12 prophage; DNA base‑flipping protein

GAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAG  >  NC_000913/566636‑566908                                                                                                                                               |                                                                                                                                    gAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGAAAGTGTATGACG‑GGCAAAGAGGCAATTATTCAGTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTg                                                                                                                                    <  1:20442/143‑1 (MQ=255)   agagCGCAGAAATTCAAGCTAATTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCGTTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGAt                                                                                                                                  <  2:968535/143‑1 (MQ=255)   aGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGAt                                                                                                                                  <  2:645028/143‑1 (MQ=255)     aTCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCt                                                                                                                                >  2:833889/1‑143 (MQ=255)         cAGACATTAAAGCTAAGGTCGGGCTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTAcc                                                                                                                            <  1:133977/143‑1 (MQ=255)          aGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGCGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCCACCGTGATCTGATCTTAccc                                                                                                                           >  1:985191/1‑143 (MQ=255)           gAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCa                                                                                                                          >  2:919968/1‑143 (MQ=255)            aaaTTAAAGCTAGGTTCGGACTGAAAGGAGCGAGGGT‑TCACGCGTCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAg                                                                                                                         <  2:504180/143‑1 (MQ=255)            aaaTTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGCAATCTGATCTTACCCAg                                                                                                                         >  1:172673/1‑143 (MQ=255)              aTTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCa                                                                                                                       <  2:832117/143‑1 (MQ=255)              aTTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTATGGGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCa                                                                                                                       >  2:399475/1‑143 (MQ=255)               tgcacgCTAAGCTCGGACTGAAAGGAGCAACTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAATCGCTTCTGTGCACAGGACGTTGCTGCGGTAACATGCGCAACCGTAATCTGATCTTACCCAGCaa                                                                                                                      <  1:357282/138‑1 (MQ=255)               gtAAAGCGAAGTTCGGACTGAAAGGAGAAAGTGTATGAGT‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCTTAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCaa                                                                                                                      <  2:1096793/142‑1 (MQ=255)                  aaGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAg                                                                                                                   >  1:227787/1‑143 (MQ=255)                    gCTAAGTTCGGACTGAAAGGAGCATGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAg                                                                                                                         >  2:672644/1‑135 (MQ=255)                    gCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAg                                                                                                                         <  1:672644/135‑1 (MQ=255)                         gTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGacac                                                                                                            >  1:554760/1‑143 (MQ=255)                           tCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCAGAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACAcgc                                                                                                          <  1:894323/143‑1 (MQ=255)                               aCTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCt                                                                                                      <  2:1023041/143‑1 (MQ=255)                                 tGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTaa                                                                                                    >  1:301579/1‑143 (MQ=255)                                 gtaaaGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACTGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTaa                                                                                                    <  2:350102/141‑1 (MQ=255)                                   aaaGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGt                                                                                                  >  1:402936/1‑143 (MQ=255)                                     aGGAGCAAGTGTATGACA‑GGCAAATAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGa                                                                                                <  1:525229/143‑1 (MQ=255)                                            aGTGTGTGGGG‑GGCGGAGGGGCAATTATACAGTACCTTGGGACGCATAAGAGCGTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAct                                                                                         <  1:208002/143‑1 (MQ=25)                                            aGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTACGTGAGTAAAct                                                                                         >  1:422086/1‑143 (MQ=255)                                            aGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAct                                                                                         <  1:138532/143‑1 (MQ=255)                                             gtgtATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTACCACACCCAGGTTGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGCGGACACGCGGCTAAGTGAGTGAActc                                                                                        >  1:430346/1‑143 (MQ=37)                                                   gACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGAAGCATAAGAGCTTCTGTGCACAGGAAGTTGCCGGGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGGGGACACGGGGCTAAGTGAGTGAACTCtcagtc                                                                                  >  1:186423/1‑143 (MQ=37)                                                    aCG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGGGAGTAAACTCtcagtaa                                                                                 >  1:252057/1‑141 (MQ=255)                                                      g‑ggCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCaga                                                                               <  2:605462/143‑1 (MQ=255)                                                          cAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGt                                                                            <  1:353330/143‑1 (MQ=255)                                                           aaaGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGGCAGAGATg                                                                           >  1:894352/1‑143 (MQ=255)                                                             aggcgtaaTTATGCATTATCTGGGGACGGATAAGTGCTTCTGTGCACAGGACGTTGCCGGGGTAACAGGCGCAACCGTAATCTGATCTTACCTAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGAc                                                                         <  2:406609/137‑1 (MQ=25)                                                              gagGCAAGTATTCAGTACCTGGGGACGCATAAGAGCTTGTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACt                                                                        <  2:177538/143‑1 (MQ=255)                                                                   aaTTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACCCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTcacac                                                                   >  2:183040/1‑142 (MQ=255)                                                                     ttattCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGa                                                                 <  1:919968/143‑1 (MQ=255)                                                                         gcATTATCTGGGGACGAATAAGAGTTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaa                                                             <  1:911908/142‑1 (MQ=255)                                                                          cATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACCAGACaaaa                                                            >  2:951331/1‑143 (MQ=255)                                                                           aTTACCTGGGGACGCATAAGCGCTTCTATGCACAGCACTTTCCCCCGGTAACAGGCGCACCCGTAATCTGATCTTACCCATCAATAGTGGACCCGCGGCTACGTGCGTAACCTCTCACACAGCGATAGCTCACATGACaacac                                                           >  2:762723/1‑140 (MQ=255)                                                                           aTTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaaaa                                                           <  1:1061977/143‑1 (MQ=255)                                                                           aTTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaaaa                                                           <  1:1055030/143‑1 (MQ=255)                                                                            ttACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGAGAGGAAACTGTCAGTCAGAGATAACTCACAGGACAAAAAc                                                          >  2:744473/1‑143 (MQ=25)                                                                             tACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACa                                                         <  2:721705/143‑1 (MQ=255)                                                                                cTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTACGTGAGTAAACTCTCAGTCAGCGGCGCCTCACATGACAAAAACAGTa                                                      >  2:1135183/1‑143 (MQ=255)                                                                                cTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTa                                                      <  2:402936/143‑1 (MQ=255)                                                                                  ggggACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATc                                                    >  1:1094711/1‑143 (MQ=255)                                                                                        gCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAg                                              >  1:787158/1‑143 (MQ=255)                                                                                        gCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTAACCCAGCAAAAGTGGACACGCGGAAAAGTGAGTAAACTCTCAGTCAGCGATGACTCACAAGCAAAAAACAGAAACAACCAg                                              >  2:647382/1‑143 (MQ=21)                                                                                        gCATAAGAGCTTCTGTGCACAGGACGTTACCGCGGAAACTGAGACAGCCTTAAGCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAg                                              >  1:789038/1‑143 (MQ=17)                                                                                           tAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTaa                                           >  2:774254/1‑143 (MQ=255)                                                                                           gaaGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTaa                                           <  1:402193/142‑1 (MQ=255)                                                                                             agagCTTCAGTGCACAGGACGTGGCCGCGGTAACAGGCGCAACCGTAATCTGATTTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTaaaa                                         <  1:942911/143‑1 (MQ=255)                                                                                              gagCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTaaaaa                                        >  2:159390/1‑143 (MQ=255)                                                                                                  tgctggccacaGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAccc                                    <  2:1093032/136‑1 (MQ=255)                                                                                                   tCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAcccc                                   <  1:146461/143‑1 (MQ=255)                                                                                                        gCACATGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAGACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTaaa                              <  2:93534/143‑1 (MQ=255)                                                                                                         cacaGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAAc                             >  2:761946/1‑143 (MQ=255)                                                                                                          acaGGACGTTGCCGCGGTAACAGGCGCAACCGTAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGAAAAGTCTCAGTCAGAGGTAACTCACATGACAGAAACAGTATCAACCAGTCAAAAACCCCGTAAACa                            >  1:49462/1‑143 (MQ=17)                                                                                                                     ccGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTg                 >  2:945127/1‑143 (MQ=255)                                                                                                                      cgcgGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAACTTTcacaaaa                >  1:417487/1‑137 (MQ=255)                                                                                                                       gcgGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAACACCGTCTCCACCCGCCTCTACTCCCCTAAACAGCATTAGCCTaaa               >  1:38493/1‑143 (MQ=14)                                                                                                                        cgGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCCAAGTGAGTAAACTCTCAGTCGGAGGTGACTCACATGACAAAAACAGTAACAACCAGTAAAAAACCCCGTAAACAGCATTCGCCCGAAt              >  2:717384/1‑143 (MQ=255)                                                                                                                            gaCAGGCGCACGCGTACTCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCg          <  2:528847/142‑1 (MQ=255)                                                                                                                            aaCAGGCGCAGCCGTAATCTGATCTTACCCAGTAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCACTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCg          <  1:602250/143‑1 (MQ=255)                                                                                                                            aaCAGGCGCAACCGTAACGTGATCTTACCCAGCAATAGTGGACACGCGGGTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCg          <  2:172673/143‑1 (MQ=255)                                                                                                                              cgaccgcAACCGTCAATTGATCTTCCCCAGCAACAGCGGACACCCGGCTAAGTGAGTCAACCCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATTAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCa        <  1:13130/139‑1 (MQ=11)                                                                                                                              cAGGCGCAACCGTACTCTCCGCTTTCCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAGCTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCa        <  2:724325/143‑1 (MQ=11)                                                                                                                              cAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGcc        >  2:1025433/1‑142 (MQ=38)                                                                                                                               aGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAGAAACCCCGTAAACAGCATTCGCCTGAATTTCGccg       >  1:29802/1‑141 (MQ=255)                                                                                                                                 gcgcAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGta     >  1:453673/1‑142 (MQ=25)                                                                                                                                   gcAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAATAAACTCTCAGTCAGAGATGACTCCCATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATCCGCCTGCATTTCGCatagac   >  2:667999/1‑138 (MQ=11)                                                                                                                                    cAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAg  <  2:301579/143‑1 (MQ=33)                                                                                                                                               |                                                                                                                                    GAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACG‑GGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAG  >  NC_000913/566636‑566908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.