| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 316099 = | NA (NA) | 4 (0.080) | 3/246 | NT | NA | noncoding (871/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 316185 = | NA (NA) | noncoding (957/1255 nt) | IS3 | repeat region | |||||
Only 100 of 294 total aligned reads displayed.
TTTGCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/316248‑316099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagtACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTT > NC_000913/316185‑316326 tgTGCGCTCATACTTCCACGCAGATTCTGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCA < 1:111614/141‑1tgTGCGCCCCTACTGCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAACCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCA < 1:484665/141‑1TTTGCGCTGATGCTTCCCCGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCA < 2:738738/143‑1TTTGCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCCCGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGCGCAGCGCA > 1:955808/1‑143TTTGCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCA < 1:882049/143‑1TTTGCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCA > 1:298722/1‑143TTTGCGCTCATACTTCCACGCAGATTATGCCGCGTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAATGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCA < 1:1003074/143‑1 TTGCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAG > 1:972685/1‑143 TTGCGCTCATACTCGCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAG < 2:865096/143‑1 TTGCGCTCAGACTGCCGCGCAGGTTATGCCGCTTCGGTTGCGCCT‑GATGATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAG < 1:218701/143‑1 ttCGCTCAGACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGG < 1:456608/141‑1 cGCGCTCATACTTCCACGCAGGTTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGG < 2:803994/142‑1 TGCGCTCATCCTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGG < 1:638096/143‑1 TGCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGG < 1:504615/143‑1 TGCGCTCATACTTCCACACAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGG < 2:667683/143‑1 gctCTCATACTCCCACGCATATTATGCCGCTTCGGCAGCTGCT‑GATAATCTGCGGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGCGCATCGCAGGC < 2:463377/140‑1 GCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGGACGATAACGTTCCGGGGCCTCTTACGCCGCCCCAGCGCCATCTGCAGGGCATCGCAGGC > 1:341327/1‑143 GCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGC < 2:634071/143‑1 GCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGCCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCCGGGCATCGCAGGC > 1:472020/1‑143 CGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCCCAGCCCCAACTGCAGGGCATCGCAGGCC > 2:954349/1‑143 CGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCC < 1:355804/143‑1 CGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGCCATCGCAGGCC > 2:34167/1‑143 GCTCATGCTTCCACGCAGATTGTGCCGCTGCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCA < 2:395164/143‑1 GCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCGGGGCATCGCAGGCCA > 1:1013066/1‑143 GCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCA > 1:875993/1‑143 GCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCA > 1:823127/1‑143 GCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCA > 1:731268/1‑143 GCTCATACTTCCACGCAGAGTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCA < 2:144836/143‑1 CTCCTACTTCCACGCAGTTTATGCCGCTTTA‑TTCAGTCTCGAGAAGCTTCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAG < 1:817443/143‑1 CTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAG < 1:964209/143‑1 CTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGCCCTCTTACGCCGCCACAGCGCCCTCTGCAGGCCACCGCAGGCCAG > 2:981936/1‑143 CTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTCAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCGTCGCAGGCCAG > 2:1005938/1‑143 CTCATACTTCCACGCAGATTATGCCGCTTCACTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGATCCGAGTGAACGAAAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAG > 1:858369/1‑143 CTCATACGTCCACGCAGACTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAG < 1:523246/143‑1 TCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCGCGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCCGGCCAGg > 2:526953/1‑142 TCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGCTAACGTTCCGGGGCCTCTTACGCCGCCACGGCCCCACCTGCAGGGCATCGCAGGCCAGc > 2:775028/1‑142 TCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCATGCCAGT > 1:721045/1‑143 TCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGT < 2:36209/143‑1 TCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAAAAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGT > 1:1023343/1‑143 CATACGTCCACGCAGATTATGCCGCGTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAttt < 2:679018/143‑4 ATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGAAAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCACGGCAGTcg > 2:706870/1‑141 ATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTATGAACGATAACGTTCCAGAGACTGTGACGCCGCGACCACGCCAACTACAGGGCAACGCAGGCCAGctc > 2:789440/1‑140 TACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATCATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCCGGGCAGCGCCGGCCAGTcgc > 2:645633/1‑140 TACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGctcc > 2:440707/1‑139 TACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTggc > 1:578064/1‑140 TTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGACATCGCAGGCCAGTAtcgac > 1:792617/1‑138 TTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACCGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCAGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGaggcgcc > 2:484352/1‑136 CTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTG > 1:86403/1‑143 acagtgtAGGCCAGGACGGTTCAGCAGATTATCAGGCGCAACTGGAGCGGCATTATCTGCGTGGAAGTATGAGAGCAAAAGTTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATC < 2:214538/136‑1 gttgatGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGGATGTATCCAT < 1:6433/137‑1 tgtAGGCCAGTACTGTTCAGCAGATTATCAGGCACAACGGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATG < 2:584171/140‑1 tggtGGCCAGCACTGTTCAGCAGATTATCAGGCGCAAGTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATG < 2:931253/139‑1 tggcgcCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCGGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATG < 2:188409/137‑1 gtgGGCCAGTGTTGGTCGGCAGATTACCAGGCGCGACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGACAGTGGTATGTATCCATGG < 2:379385/140‑1 ggGGCCAGTGCTGTTCCGCAGATTAGCCTGCGCAACCGACGGGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGCTTGCTGCCACTATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGA < 2:470695/141‑1 ggggCAGGACTGTTCGGGAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAG < 2:248288/139‑1 gggaCAGTACTGTACAGCAGATTATCAGGCGCAACAGGAGCGGCATGATATGCGTGGGAGTATGAGCGCAAAAGGTTGCTGCGACGATAATGCCTGCGTGGAAAGCTTATTTCATTCGCTGAAAGTGGAATGTATCCATGGAG < 2:919371/139‑1 AGGCGAGTACTGTTTAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAG < 1:313757/143‑1 AGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAG < 2:62223/143‑1 AGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAA < 1:685918/48‑1 AGGCCAGGACTGTTCAGCAGATTAGCAGGCGCAACGGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAG < 2:320345/143‑1 GGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGA < 2:545414/143‑1 GGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGA < 1:626260/143‑1 GGCCAGGACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCAGAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGA < 1:665234/143‑1 GCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGTGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAA < 1:421111/143‑1 GCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGCAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGCATGTATCCATGGAGAA > 1:207766/1‑143 GCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGGAAGTGGAATGTAGACATGGAGAA > 2:1048764/1‑143 GCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAA < 1:537307/143‑1 GCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCC > 1:950808/1‑135 GCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGCGGAAGTATGCGCGCAAAAGGTTGCTGCTACGATAGTGCCTGCGTGGAAAGCTTCTTTCATTCGCTGGAAGTGGAATGTATCCAAAGAGAA > 1:255345/1‑143 GCCAGTACTGTTCAGCAGATTATCAGGCGCAACAGAGACAGCTTAATCTTCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAA > 1:1002065/1‑143 GCCAGTACCGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAA < 1:894864/143‑1 CCAGTACTGTTCAGCAGATTAGCAGGCGCAACTGAAGCGTCATAATCTGCGTGGAAGTATGAGCGCAAAAGGGTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAAC < 2:219766/143‑1 CCAGTACGGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCAGAATCTGCGTGGAAGTATGAGCGCAACAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAAC < 2:197763/143‑1 aAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACA < 1:42830/142‑1 CAGTCCGGTTCAGGAGATTATCAGGCGCAACTGAAGCGGCATAGTCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGTTACGATAATGCCTGCGTGGAAAGCGTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACA < 2:827741/143‑1 CAGTACTGTTCAGCAGATTATCATGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACA < 1:738856/143‑1 CAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGACGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACA > 1:549645/1‑143 CAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACA > 1:389925/1‑143 CAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTCGAATATATACATGGAGAACA > 1:700873/1‑143 CAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGGGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACA > 1:248543/1‑143 CAGTACTGTGCAGCAGATCAGCAGGCGCAACTGAAGCGGCATCATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCCACCACAATGCCTGCGTGGACAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACA < 1:838672/143‑1 CAGGACTGTTCAGCAGAGTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGGTGCTGCTACGATAATGCCGGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACA < 1:173060/143‑1 AGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGCAAGCGGAATGTATCCATGGAGAACAC > 2:893415/1‑143 AGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGCACAC > 2:1037582/1‑143 AGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACAC > 1:609961/1‑143 AGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACAC > 1:441550/1‑143 AGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACAC > 1:975233/1‑143 AGTACTGTGCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACAC < 2:275981/143‑1 GTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGCGAACACc > 2:767384/1‑142 GTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACT < 1:936078/143‑1 GTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCAATGGAGAACACT > 2:113380/1‑143 GTACTGTTCAGCAGATTATCAGGCGCAACTGAAGAGGCATAATCTGCGTGGAAGTATGAGCGCAAACGGTTGCTGCTGCGATAATGCCTGCGTGGAACGCTTCTTTCACTCGCTGAAAGTGGAATGTATCCATGGAAAACACg > 2:328731/1‑142 GTACTGTGCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACT < 1:989016/143‑1 TACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGGAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTT < 2:312098/143‑1 TACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTT > 1:617869/1‑143 TACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTT < 2:96783/143‑1 TACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGCATCCATGGAGAACACTT < 1:369149/143‑1 TACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGAGGAAGTATGAGCGCAAAAGGTTGCTGCTAAGATAATGCCTGCGTGGAAAGCTTGTTTCATTCGCTGAAAGTGGAATGTATCGATGGGGAAGACTT > 1:144883/1‑143 TACTGCTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTT < 1:691337/143‑1 TTTGCGCTCATACTTCCACGCAGATTATGCCGCTTCAGTTGCGCCT‑GATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/316248‑316099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagtACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTT > NC_000913/316185‑316326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |