New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4240741 =	61 (1.130)	3 (0.060)	3/242	NT	5.1%	intergenic (+6/+38)	psiE/xylE	putative phosphate starvation‑inducible protein/D‑xylose:H(+) symporter
	?	NC_000913	4240769 =	55 (1.110)					intergenic (+34/+10)	psiE/xylE	putative phosphate starvation‑inducible protein/D‑xylose:H(+) symporter

GCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4240889‑4240741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtgctgGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGCTGCCAGAACGCCCATACAACC  >  NC_000913/4240769‑4240910                                                                                                                                                                                                                                                                                                     ggtCTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAGCCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGC                                                                                                                                                      <  2:955109/140‑1   ACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGT                                                                                                                                                    >  2:780429/1‑143    CTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGTG                                                                                                                                                   <  1:776618/143‑1     TGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCCTTTCGGCGTGC                                                                                                                                                  >  1:421153/1‑143     TGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGTGC                                                                                                                                                  <  2:881880/143‑1                                                                                                                      TGTCCAGCACGCCGCGCCATTTCGGCGTGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAG                                                                    >  1:700846/1‑108                                                                                                                      TGTCCAGCACGCCGCGCCATTTCGGCGTGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAG                                                                    <  2:700846/108‑1                                                                                                                                GCCGCGCCATTTCGGCGTGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGC                       >  1:640387/1‑143                                                                                                                                             GGCGTGCTGTACGGGAAGGTTATAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGCTGCCAGAACGCCC          <  2:886789/143‑1                                                                                                                                             GGCGTGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGCTGCCAGAACGCCC          <  2:442920/143‑1                                                                                                                                                   CTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGCTGCCAGAACGCCCATACAA    <  2:440386/143‑1                                                                                                                                                     GGACCGGAAGATTGCAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTGTTACCTTTGGTTTCCGGGACAAATTTCCACATAAAAAGTGCTGCCAGAACGCCCATACAACC  <  2:378262/143‑1                                                                                                                                                                                                                                                                                                     GCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4240889‑4240741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtgctgGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGCTGCCAGAACGCCCATACAACC  >  NC_000913/4240769‑4240910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.