New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 293961872 (1.340)4 (0.070) 3/260 NT 5.3% coding (251/732 nt) fucR DNA‑binding transcriptional activator FucR
?NC_000913 = 2939635 71 (1.330)coding (268/732 nt) fucR DNA‑binding transcriptional activator FucR

ACAGACGCAGGGTAAAATTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGTAAACGCGAACGCATTC  >  NC_000913/2939493‑2939776
                                                                                                                                                |                                                                                                                                             
agcgtcGCAGCGTAAAATTCTGCTCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAGAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGt                                                                                                                                               <  2:384418/138‑1 (MQ=255)
  aGACGCAGGGTAAAATTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAACTCAAGACAGTGGCGACCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGtcg                                                                                                                                             >  2:381464/1‑141 (MQ=255)
    aCGCAGGGTAAAATTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCTCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATCACGCGCGCGAGGCGCTAGCGTggcg                                                                                                                                           >  2:992190/1‑141 (MQ=255)
        aGGGTAAAATTCTGCCCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTgaa                                                                                                                                       <  1:463561/143‑1 (MQ=255)
           gTAAAATTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTGCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTgaagaa                                                                                                                                    <  2:691645/143‑1 (MQ=255)
            tAAAATTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCCCGCGCGAGGCGCTCGCGTGGATTGaagaag                                                                                                                                   >  1:357589/1‑143 (MQ=255)
             aaaaTTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAgg                                                                                                                                  <  1:360279/143‑1 (MQ=255)
             aaaaTTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAgg                                                                                                                                  >  2:949200/1‑143 (MQ=255)
             aaaaGTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTGCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAgg                                                                                                                                  <  1:494159/143‑1 (MQ=255)
              aaaTTCTGCGCAATCATGGACGCGCTAAATATATCCGCCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAggg                                                                                                                                 >  1:514603/1‑143 (MQ=255)
                 ttCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCGAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGCAGACGGGATg                                                                                                                              >  1:410842/1‑143 (MQ=255)
                       gcAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATa                                                                                                                        >  1:790425/1‑143 (MQ=255)
                       gcAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGCGGATTGAAGAAGGGATGGTGATa                                                                                                                        >  2:515494/1‑143 (MQ=255)
                        cAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAg                                                                                                                       <  1:818973/143‑1 (MQ=255)
                         aaTCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGGTGAAAAGCAAATATGTATTTACTTTTGCTATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGagagg                                                                                                                      >  1:486302/1‑142 (MQ=255)
                         aaTCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGc                                                                                                                      <  1:840086/143‑1 (MQ=255)
                               ggACGCGCTAACTATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGa                                                                                                                <  2:339239/143‑1 (MQ=255)
                               ggACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGa                                                                                                                <  1:729251/143‑1 (MQ=255)
                               ggACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGa                                                                                                                <  2:162359/143‑1 (MQ=255)
                                 aCGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACg                                                                                                              >  1:560227/1‑143 (MQ=255)
                                  cgcgCTAAATATATCCCCCGTCAAAATCAAGCCAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGc                                                                                                             <  2:416239/143‑1 (MQ=255)
                                    cgcTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCa                                                                                                           <  2:493549/143‑1 (MQ=255)
                                    cgcTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCa                                                                                                           >  1:1020646/1‑143 (MQ=255)
                                       tAAATATATCCACCGTCAAAATCAAGACAGTGGCGATACCTTCCACCCGGCGTGAAGAATGGAAAATAGCTTCAACACGTAGGTCGCGCGCGAGGCGCTCGCGTGGATTCAACGAGGGATGGTGATAGCCTTAGACGCCAGtt                                                                                                        >  1:1048880/1‑143 (MQ=255)
                                          atatgtCCACCGTCAAAGTCAAGACAGTGGCGATCCCTTTCACAGCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCaa                                                                                                     <  2:367256/143‑1 (MQ=255)
                                            atatCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCCGTTCAACt                                                                                                   >  2:103542/1‑143 (MQ=255)
                                                ccACCGTCAAAATCAAGACCGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAATCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCt                                                                                               <  1:488120/143‑1 (MQ=255)
                                                ccACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATCTCGCGCGCGAGGCGCTCGCGTGGATTGACGAAGGGATGGTGATAGCCTTAGCCGCCAGTTCAACTTGCt                                                                                               >  2:903520/1‑143 (MQ=255)
                                                 catcGTCAAAATCACGACCGTCGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATAGCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTg                                                                                              <  2:570280/140‑1 (MQ=255)
                                                  aCCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTgg                                                                                             >  2:277626/1‑143 (MQ=255)
                                                  aCCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTgg                                                                                             >  1:562623/1‑143 (MQ=255)
                                                        aaaaTCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTg                                                                                       >  2:948119/1‑143 (MQ=255)
                                                         aaaTCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGAGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTgg                                                                                      >  2:30374/1‑143 (MQ=255)
                                                          aaTCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTGAACTTGCTGGTATCTGGc                                                                                     >  1:85327/1‑143 (MQ=255)
                                                           aTCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAACCCTTATGCGCATAAAGCAGATATCGCGCGCGAGGCACTCGCGTGGATAGAAGAAGGGAAGGTGATAGCCTTAGACGCCGGTTCAACTTGCGGGTATCTGGCa                                                                                    >  2:268333/1‑143 (MQ=255)
                                                              aaGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTCGACGCCAGTTCAACTTGCTGGTATCTGGccccc                                                                                 >  1:989414/1‑139 (MQ=255)
                                                                  cAGTGGCGACCCCTTTCACCTCAGGCTGAAAAGCCAGTATGCGCATAAAGCAGAGAGCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGt                                                                             <  1:164395/143‑1 (MQ=255)
                                                                   ggttgCGATCCCTTTCACATCCCGCTCAAAAGCCATTATGCGCATAAAGCCGGTATCCCGCGCGAGGCGCCCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCAAGTTCAACTTGCTGGTATCTGGCACGCCAGtt                                                                            <  2:550054/139‑1 (MQ=255)
                                                                       gCGTTCCCGTTCACATCAGGCTGAAATGTCATTGTGAGCATGAAGCAGATGTCGCGCGCCAGGCGCTAGCGTGGATTGAAGAAGGGATGGTGATAGCCTTGGACGCCGGTGTAACTTGCTGGTATGTGGCACGCCAGTTGCCt                                                                        <  2:299155/143‑1 (MQ=255)
                                                                       gCGATCCGTTTCAGATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCt                                                                        <  2:299088/143‑1 (MQ=255)
                                                                        cGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTg                                                                       >  1:590383/1‑143 (MQ=255)
                                                                        cGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATAGCGCGGGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTg                                                                       >  1:292052/1‑143 (MQ=255)
                                                                         ggtCCCTTTCACAGCAGGCTGAAAAGCCATTATGCGCATAAAGCAGGTATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGa                                                                      <  1:710362/141‑1 (MQ=255)
                                                                               tttCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTgaaga                                                                                                                                     <  1:190325/74‑1 (MQ=255)
                                                                               tttCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTgaaga                                                                                                                                     >  2:190325/1‑74 (MQ=255)
                                                                               tttCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGAATGAAGCAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGACAGTTGCCTGACCTCaa                                                                >  2:476140/1‑143 (MQ=255)
                                                                                      tctggCTGATAAGTCATTGTGCTCATAAAGCATATATCTGCCGATAGTCACTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAg                                                         <  2:169084/140‑1 (MQ=255)
                                                                                         ggCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTc                                                      >  1:330463/1‑143 (MQ=255)
                                                                                          gCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCt                                                     >  2:992665/1‑143 (MQ=255)
                                                                                           cTGCAAAGCCATTCTGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCtt                                                    <  2:486302/143‑1 (MQ=255)
                                                                                             gAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCa                                                  >  2:816955/1‑143 (MQ=255)
                                                                                                   gCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCCCGTGGATTGAAGAAGGGCTGGTGATAGACTTAGACGCCAGTTCAACTTGCTGGTATCTGGCGCGCCAGTTGCCTGACATCACCATTCAGGTCTTCCCCAAt                                             >  2:493723/1‑143 (MQ=255)
                                                                                                   gCCATTATGCGCATAAAGCAGAGATCGCGCGCGGGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAAt                                             <  2:879923/143‑1 (MQ=255)
                                                                                                     ccttATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAg                                           <  1:101918/141‑1 (MQ=255)
                                                                                                      aTTATGCGCATAAAGCGGATATCGCGCGCGAGGCGCTCGCGTgcgatatctgctttatgcgcataatggcttttcagcctgatgtgaaagggatcgccactgtcttgattttgacggtggatatatttagcgcgtccat                                              <  2:215927‑M2/139‑98 (MQ=255)
                                                                                                      aTTATGCGCATAAAGCGGATATCGCGCGCGAGGCGCTCGCGTgcgatatctgctttatgcgcataatggcttttcagcctgatgtgaaagggatcgccactgtcttgattttgacggtggatatatttagcgcgtccat                                              >  1:215927‑M2/1‑42 (MQ=255)
                                                                                                      aTTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGc                                          <  2:941509/143‑1 (MQ=255)
                                                                                                       ttATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGcc                                         >  1:467828/1‑143 (MQ=255)
                                                                                                             gcATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTCGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCCACATTCAGGTCTTCACCAATAGCCATCCgc                                   >  1:640061/1‑142 (MQ=255)
                                                                                                             agaTAAAGCAGGTGTCGCGCGCGAGGCGGTCGCGTGGATTGAAGAAGGGATGGGGATAGCCTTAGACGCCAGTTCAGCTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGa                                   <  2:308027/141‑1 (MQ=255)
                                                                                                               aTAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGAtt                                 >  1:924317/1‑143 (MQ=255)
                                                                                                               aTAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGCCTTCACCAATAGCCATCCGAtt                                 >  2:700272/1‑143 (MQ=255)
                                                                                                                tAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGAttt                                <  2:189107/143‑1 (MQ=255)
                                                                                                                tAAAGAGGAGATCGCGCGCGAGGCGCGCGCGGGGACTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGAttt                                <  1:107736/143‑1 (MQ=255)
                                                                                                                 agaGCAGATGTCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTCAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTg                               <  2:615951/141‑1 (MQ=255)
                                                                                                                  aaGCAGATGTCGCGTGCGAGGCGCTCGCGTGGTTTGAAGTAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGc                              <  2:137714/143‑1 (MQ=255)
                                                                                                                  aaGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGc                              >  1:160421/1‑143 (MQ=255)
                                                                                                                  aaGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGAAATCAACATTCATGTCTTCACCAATAGCCATCCGATTTGc                              <  1:1002416/143‑1 (MQ=255)
                                                                                                                   aGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGcc                             <  1:948119/143‑1 (MQ=255)
                                                                                                                      cAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCAt                           <  2:823500/143‑1 (MQ=255)
                                                                                                                            tCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTc                     >  1:1013357/1‑143 (MQ=255)
                                                                                                                               cgcgcgAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGt                  <  1:949200/143‑1 (MQ=255)
                                                                                                                               cgcgcgAGGCGCTCGCGCgcgatatctgctttatgcgcataatggcttttcagcctgatgtgaaagggatcgccactgtcttgattttgacggtggatatatttagcgcgtccatgattgcgcagaattttaccctgcgtctg                  <  1:1010998‑M2/143‑126 (MQ=255)
                                                                                                                                   ccaGGCACTCGCGTGTATTGAAGAAGGTATGGTGATAGCATTAGTCGACGGTTCAACTTGCTGGTATCCGTCACGCCAGTTGCCTGCCATCAACATTCAGCTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGTAAAc              <  2:927166/141‑1 (MQ=255)
                                                                                                                                    gAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGTAAAcg             >  2:90172/1‑143 (MQ=255)
                                                                                                                                       gcgcTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGTAAACGCGa          >  1:861165/1‑143 (MQ=255)
                                                                                                                                        cgcTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATGTGCCATGCACTCCGTAAACGCCaa         >  2:614178/1‑143 (MQ=255)
                                                                                                                                           tCGCGGgcgacagcttctttgtgcgcataacggcttttcagcctgatgtgaaagggaccgccactgtcttgattttgacggtggatatatttcgcgcgtccatgattgcgcagaattttaccctgcgtctgtaattcattgag      >  1:553532‑M2/1‑6 (MQ=255)
                                                                                                                                               gTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGTAAACGCGAACGCATTc  >  2:31307/1‑143 (MQ=255)
                                                                                                                                                |                                                                                                                                             
ACAGACGCAGGGTAAAATTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGTAAACGCGAACGCATTC  >  NC_000913/2939493‑2939776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.