New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3297649 =50 (0.930)4 (0.080) 4/252 NT 7.8% coding (490/1041 nt) yraQ permease family protein YraQ
?NC_000913 3297673 = 47 (0.910)coding (466/1041 nt) yraQ permease family protein YraQ

CTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAA  >  NC_000913/3297533‑3297813
                                                                                                                                            |                                                                                                                                            
gttggggtggccgggcatggggtggagatgctgtggggcgccggtcgcggcgggaatgcgtcgccaacaggtgtcgatgggcggtgcgctggcattctggatgggcaatccggtgtTAAACACCAGCGTCGCCGGGTTTAaca                                                                                                                                            >  1:61976‑M1/117‑143 (MQ=255)
cTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAaca                                                                                                                                            >  1:928968/1‑143 (MQ=255)
cTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCAGGCAACCAGACGAATCGACGCAAAACCCCGGCCGAGGACAGAGCCGATAAACACCAGCGTCGCAGGGATTaaaa                                                                                                                                            >  1:77424/1‑141 (MQ=255)
 ggCGGTTGCGGTGTGTCACGCACCCAGTTTTGCACCAGCGGCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAGCCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAacac                                                                                                                                           <  2:525104/142‑1 (MQ=255)
   cGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCg                                                                                                                                         <  1:683442/143‑1 (MQ=255)
        gCGGTCTTGCACGCACCCACGTTTGCACCAGCGTCGCAATCAGCACCACCATCACCAGCCCGTCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTg                                                                                                                                    <  1:218631/143‑1 (MQ=255)
              tttCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATc                                                                                                                              >  1:922557/1‑143 (MQ=255)
                  aCGCACCCCTTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCCGCCCGCCCACCAGACGAATCGCCGCAACACCCCAGCCCAGGACACACCCCATCACCACCACCGCCCCCGGGCTCACCACCGCATCCCCCATcccgc                                                                                                                          >  2:293733/1‑140 (MQ=255)
                  aCGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACCAAGCCCATAAACACCAGCGCCACCGCGCTCACCCCCGGACTGCCCATCAAGa                                                                                                                          >  2:344987/1‑143 (MQ=255)
                   cGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGACCATCAACACCCGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGaa                                                                                                                         <  1:19948/143‑1 (MQ=255)
                      aCCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGc                                                                                                                      <  1:398360/143‑1 (MQ=255)
                        ccATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAGCCCCATCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCa                                                                                                                    <  1:422602/143‑1 (MQ=255)
                        ccATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCACCCAGGATcccg                                                                                                                    >  1:622153/1‑142 (MQ=255)
                          aTTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAgc                                                                                                                  >  1:195856/1‑143 (MQ=255)
                               ggCACCAGCGGCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCAcc                                                                                                             <  1:925982/142‑1 (MQ=255)
                                      gCGTCGCAACCAGCAACACCATCCCCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATc                                                                                                      <  1:252758/143‑1 (MQ=255)
                                          cGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGaca                                                                                                  <  1:911624/143‑1 (MQ=255)
                                           gCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGacac                                                                                                 <  1:1011394/143‑1 (MQ=255)
                                               tCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCCTCCAGAATTCCAGCGCACCGCCCATCGGCAcccgc                                                                                             >  1:492862/1‑140 (MQ=255)
                                               tCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGt                                                                                             >  1:847147/1‑143 (MQ=255)
                                                ggcgggaatgcgtcgccaacaggtgtcgatgggcggtgcgctggcattctggatgggcaatccggtgtTAAACACCAGCGTCGCCGGGTTTAACACCg                                                                                                                                         <  1:247369‑M1/30‑1 (MQ=255)
                                                ggcgggaatgcgtcgccaacaggtgtcgatgggcggtgcgctggcattctggatgggcaatccggtgtTAAACACCAGCGTCGCCGGGTTTAACACCg                                                                                                                                         >  2:247369‑M1/69‑98 (MQ=255)
                                                  gCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTgg                                                                                          <  1:417415/143‑1 (MQ=255)
                                                     acacCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAACGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCCGAATGCCAGCGCACCGCCCATCGACCCCTGCTGGCGa                                                                                       >  2:542076/1‑143 (MQ=255)
                                                       acCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACg                                                                                     <  1:412947/143‑1 (MQ=255)
                                                            cACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACCAAGCCCCTCCCCCCCGGCGTCGCCGGGTTTAACACCGGACTACCCCCCCAGCATGCCAGCGCACCGCCCACCGCCACCTGCCGGCGACGccctg                                                                                >  2:422760/1‑139 (MQ=255)
                                                              ccAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGCTTGCCCATCCAGACTCCCTGCGCACCGCCCATCGACACCTATTCGCGACGCATTccc                                                                              >  1:170840/1‑143 (MQ=255)
                                                                   ccGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCcgccgc                                                                         <  1:419520/143‑1 (MQ=255)
                                                                      gCCACCAGACGAATCGCTGCAAAATGCCGGCCGAGGACAAAGCCCATAATCACCGGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGAc                                                                      <  2:7002/143‑1 (MQ=255)
                                                                        caccaGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCg                                                                    <  1:571948/143‑1 (MQ=255)
                                                                             gACGAATCGCCGCAACACCCCCGCCGAGGACACAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGcc                                                               <  2:569504/143‑1 (MQ=255)
                                                                              aCGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCg                                                              <  2:712836/143‑1 (MQ=255)
                                                                                  aTCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGAATCACCGCCGCGACCGGCGCCGcaca                                                          >  2:166720/1‑143 (MQ=255)
                                                                                      ccgcAACCCCCCAGCCGCGGACAAAGCCCACACACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCAcagcag                                                      <  1:629476/143‑1 (MQ=255)
                                                                                      ccgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATACCCGCAGCGACGCTAGCACCAcagcat                                                      >  1:760715/1‑142 (MQ=255)
                                                                                        gccaacccccAGCCGCGGACAAAGCCCCTAGACACCCGCGTCGCCGGGTCTAACACCGGAGTGCACAACCAGACTGCCAGCGCACCGCCCATCGACACCTGTTGGCGATGTATTCCCGCCGCGACCGGAGCCGCACAGCAGGt                                                    <  2:178868/137‑1 (MQ=255)
                                                                                            aaCCCCAGCCGAGGACAAGGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTacac                                                <  1:542076/143‑1 (MQ=255)
                                                                                               cccAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACAcatc                                             >  2:492153/1‑143 (MQ=255)
                                                                                               cccAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGCCTTAACACCGGATTGCCCATCCAGAATGCCCGCGCCCCGCCCATCGACACCTGTTCGCGACGCCCTCCCGCCGCGCCCGCGGCCGCCCAGCAGGcacacaac                                             >  2:799047/1‑141 (MQ=255)
                                                                                                ccAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACAcatca                                            <  2:195856/143‑1 (MQ=255)
                                                                                                 cAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACAcatcat                                           >  1:77580/1‑143 (MQ=255)
                                                                                                  aGCGGATGACCAAGACCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATg                                          <  2:3590/143‑1 (MQ=255)
                                                                                                  aGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATg                                          <  1:720503/143‑1 (MQ=255)
                                                                                                       aGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCgg                                     >  1:464453/1‑143 (MQ=255)
                                                                                                              cggtgttaaacccggcgacgctggtgtttaACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCccgcc                                                                           >  2:247369‑M2/31‑98 (MQ=255)
                                                                                                              cggtgttaaacccggcgacgctggtgtttaACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCccgcc                                                                           <  1:247369‑M2/68‑1 (MQ=255)
                                                                                                               gCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCCGCGCACAGCCCATCGCCTACTGTTGGCGGCGCGTCCCCGCCGCGACCAGAGCCGCACAGCAGGTACACATCAGACCCGCCACCGagc                             >  2:278952/1‑141 (MQ=255)
                                                                                                                cccATAGACACCACCGTCGCCGGGTTTAACACCGGATCGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGaaaa                            <  2:258295/143‑1 (MQ=255)
                                                                                                                 tgttaaacccggcgacgctggtgtttaACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGCGCCCCACAGCATCTCCACCCCATGCCcggccaccccaac                           >  1:61976‑M2/28‑137 (MQ=255)
                                                                                                                  cATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCACCGACACCTGTTGGCGACGCATTCCCGCCGCGCCCGGAGCCGCACAGCAGGCACACACCATGCCCGGGCACGAAAACa                          >  2:137161/1‑143 (MQ=255)
                                                                                                                   aTAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAg                         >  1:913460/1‑143 (MQ=255)
                                                                                                                   aTAAACACCAGCGTCACCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAg                         >  1:393409/1‑143 (MQ=255)
                                                                                                                    TAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTCGCGACGCATTCCCGCCGCGACCCGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGc                        <  2:259260‑M1/143‑1 (MQ=255)
                                                                                                                      aacccggcgacgctggtgtttaACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCCGTTGGCGACGCCTTCCCGCCGCCACCGGACCCCCACAGCACGTACACACCCTCCCCGGCCCCGATAACACcgc                      >  2:409081‑M2/23‑142 (MQ=255)
                                                                                                                       gCACCAGCGTCGCCGGGTTTAACACCGGATTGCCCAGCCAGAATGCCAGCACACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGtt                     >  1:392573‑M1/2‑143 (MQ=255)
                                                                                                                        CACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTc                    >  1:702488‑M1/1‑143 (MQ=255)
                                                                                                                          ccAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACCTCATGCCCGGCAACGAAAACAGCGTTcac                  >  1:1019482/1‑141 (MQ=255)
                                                                                                                              cGTCGCCGGGCTTAGCACCGGCTTGGCCCTCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCcagca              <  1:1024295/143‑1 (MQ=255)
                                                                                                                                tCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCagcagc            >  1:488660/1‑143 (MQ=255)
                                                                                                                                tCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCAAGCAACGAAAACAACGTTCCCagcagc            >  2:244113/1‑143 (MQ=255)
                                                                                                                                  gCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCCGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGGAGGTACACATAATGCCCGGCCACGAAAACAGCGTTCCCCGCACCgg          >  2:727885/1‑142 (MQ=255)
                                                                                                                                   ccGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCCTTCCCCCCGCGACCGGAGCCGCACAGCAGGTACACACCATGCCCGGCCACGAGCACAGCGTCGCcagcagagcg         >  1:392791/1‑139 (MQ=255)
                                                                                                                                   ccGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACAcatca                                            <  2:539838/108‑1 (MQ=255)
                                                                                                                                   ccGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACAcatca                                            >  1:539838/1‑108 (MQ=255)
                                                                                                                                     gggcttaACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGcc       <  2:836814‑M2/136‑1 (MQ=255)
                                                                                                                                      ggTTTAACACCGGATTGCGCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGGTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTAGACATCCTGCCCGGCAACGAAGACCGAAGTGCCAGCAGCggcccc      >  2:345070/1‑138 (MQ=255)
                                                                                                                                       gtttaACACCGGATTGCCCATCCAGAATGCCAGCGCCCCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCagc     >  1:682531‑M2/6‑143 (MQ=255)
                                                                                                                                          taACACCGGATTGCCCATCCAGACTGCCAGCGCACCGCCCATCGGCACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGaa  <  2:622153‑M2/141‑1 (MQ=255)
                                                                                                                                          taACACCGGATTGCCCATCCAGAATGCCCGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCGACGAAAACAGCGTTCCCAGCAGCGTGCCGCgag  >  1:469316‑M2/3‑142 (MQ=255)
                                                                                                                                            |                                                                                                                                            
CTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAACACCGGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAA  >  NC_000913/3297533‑3297813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.