New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3571215 | 47 (0.870) | 3 (0.060) | 3/252 | NT | 6.0% | coding (105/1974 nt) | glgX | limit dextrin alpha‑1,6‑glucohydrolase |
? | NC_000913 | = 3571246 | 49 (0.950) | coding (74/1974 nt) | glgX | limit dextrin alpha‑1,6‑glucohydrolase |
ATAACCATAACGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGA > NC_000913/3571104‑3571385 | aTAACCATAGCGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGaaaa < 1:726769/143‑1 (MQ=255) aaCCATAACGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAgt < 1:980851‑M2/143‑3 (MQ=255) ccATAACGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGGTCTACCCGCCCGGCACGAGCGGAGAAAAgggt < 2:289235‑M2/143‑5 (MQ=255) aCGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAACTGTCGCCACTGTACCCCGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGt < 1:239185/143‑1 (MQ=255) cgcggccccGGGCGCGCACCCGGCGGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTCCTTGTCTATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGCGCGGAGAAAAGTGTGAAGtt < 2:511130/137‑1 (MQ=255) cGCAATCCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGtt < 1:985893/143‑1 (MQ=255) cAAACGCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGa < 2:790947/143‑1 (MQ=255) cAAACCCGGGCGCGCGTCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGa < 2:676459/143‑1 (MQ=255) aaCCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACg < 1:663554/143‑1 (MQ=255) gggCGCGCATCCGGCAGATAAACGTACCAAATGTCGACACTGTGACCTGGCAAGTCATAGCGATATTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGAATGCGCGGAGAAAAGAGTGAAGTTCACCCCCta > 2:452752/1‑142 (MQ=255) cgcgcATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGACGTTGACGCCCTGAcc > 2:725520/1‑143 (MQ=255) gcgtgcggcggATAGTCGTGCCAGAGGCTGCCACTGTGGCGTGGCAAGTCATAGCGATGTTCCTGGCCATTGGTGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACcgtc < 2:485060/138‑1 (MQ=255) tcGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCAGAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTaa < 1:806400/142‑1 (MQ=255) ggCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATg > 1:647563/1‑143 (MQ=255) ggCAGATAACCGTGCCAAATGTCGCCAATGTGACCTGGCAAGTCATAGCGATGTTCCTGGCCATTGACGTCAAAGACACACAGATATACCAGCTCGGCATGAGCGGAGCAAAGTGGGAAGTTGACGACCGAACGGGCGTAATg > 2:603056/1‑143 (MQ=255) gCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATgc < 1:676891/143‑1 (MQ=255) tAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGcc > 1:544396/1‑143 (MQ=255) ccGGGCCAAACGTCGCGACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGGCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAg < 2:59333/143‑1 (MQ=255) gCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGCAAAGTGTGAAGTTGACGCCCTGACCGTCGTAAGGCGCGCCGCGGGGa > 2:1008344/1‑143 (MQ=255) ccAAATGTCGCCACTGTGCCCTGGCAAGTCATAGAGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGGGAAGTTGCAGACCTGAGCGTCATAATGCGAGCCGAGgagat > 1:874627/1‑142 (MQ=255) aaaTGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCg > 1:569525/1‑143 (MQ=255) aaTGTCGCCACTGGGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCGACCCGCGCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCgg < 1:18211/143‑1 (MQ=255) tCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATCGGCGTGCCATACTCTCAGGTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGttt < 1:766812/143‑1 (MQ=255) gCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGCAACGTGTGAAGTTGACGCCCTGCCCGTCGTAATGCACGACGAGCGGACCGTGTTTGc > 1:1020123/1‑143 (MQ=255) ccACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGAGGGTTTGcc > 1:138349/1‑143 (MQ=255) cACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGCGGGGAGCGGGTTTGCCa > 2:285579/1‑143 (MQ=255) cACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCa > 1:416463/1‑143 (MQ=255) aCTGTGCCCTGGCAAGGCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCaa < 1:389832/143‑1 (MQ=255) cggggCCCTAGCACGTCGTAGCGATGTTCATGGCGAGTGGCGTCAAAGACACACAGTTCGACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAAt < 2:792398/139‑1 (MQ=255) tgtgCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATg < 2:233053/143‑1 (MQ=255) cTGGCAAGTCATAGCGATGTTCCTGGCCATTGACGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGt > 1:899051/1‑143 (MQ=255) gCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTtgt < 2:641592/143‑1 (MQ=255) aTAGCTATGTTCCGGGCCGTTGGCGTCAAGGACGCACAGTTCTACGCGCTCGGCATGAGCGGAGAAGAGTGTGAAGTTGACGCCCTGGCCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTc < 2:513721/143‑1 (MQ=255) aTGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTc < 2:544396/143‑1 (MQ=255) ccTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGaa > 1:915267/1‑143 (MQ=255) ctcgCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCACGCGCGGAGTGAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAAc < 1:196793/140‑1 (MQ=255) cTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAAc > 1:640502/1‑143 (MQ=255) tGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAAcc > 1:230307/1‑143 (MQ=255) aTTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAgtgtgaagttgacgccaatggccaggaacatcgctatgacttgccagggcacagtggcgacatttggcacggttatctgccggatgcgcgccc < 2:438441‑M2/143‑94 (MQ=255) tGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTGGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGACCCAGCCAGa > 2:794717/1‑143 (MQ=255) gCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGAGCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTAGTGTCATGCGGCAGCGCGAACCAGCCAGATa > 2:684678/1‑143 (MQ=255) tCAAAGACACACAGTTCTACCCGCTCGGCATGGGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTg < 1:605634/143‑1 (MQ=255) aaaGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGCTAGTGGc > 2:139028/1‑143 (MQ=255) aaGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTgagc > 2:605021/1‑140 (MQ=255) gACACACAGTTCTACCCGCCCCGCATGCGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAg < 1:814881/143‑1 (MQ=255) acacaGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTACTGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCGCCCGAACCAGCCAGACAGCGGCCAGCgg > 2:169525/1‑143 (MQ=255) cacaGTTCTACCCGCTCGGCATGAGCGGAGAAAAgtgtgtctttgacgccaatggccaggaacatcgctatgacttgccagggcacagtggcgacatttggcacggttatctgcc > 1:758103‑M2/1‑34 (MQ=255) cacaGTTCTACCCGCTCGGCATGAGCGGAGAAAAgtgtgtctttgacgccaatggccaggaacatcgctatgacttgccagggcacagtggcgacatttggcacggttatctgcc < 2:758103‑M2/115‑82 (MQ=255) acaGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAAGCAGCCAGAGAGGGGCCAGCggtg > 1:582401/1‑143 (MQ=255) acaGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGCTAGTGGCCAGCggtg > 1:603033/1‑143 (MQ=255) acaGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCggtg < 1:116853/143‑1 (MQ=255) ttCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGTCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAg < 1:682688/143‑1 (MQ=255) tACCCGCTCGGCATTAGCGGAGAAAAGTGTGAAGTTGCAGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGt < 1:763638/143‑1 (MQ=255) cccGCTCGGCATGGGAGGGGAAAGGCGTGTAGGCGCGGCCCGGACCGTCGTAATGCGCGCCGAGGGCAGCGGGGTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCa < 2:639367/143‑1 (MQ=255) cGCTCGGCATGAGCGGAGAAAGGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGCGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAgg < 2:510501/143‑1 (MQ=255) cGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAgg > 2:395129/1‑143 (MQ=255) cgccATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTa < 2:836996/140‑1 (MQ=255) gAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAAt < 1:215386/143‑1 (MQ=255) aaaaGTGTGTAGTTGCCGACATGACCGTCGGAATGCGCGCCGGGGGGGGCGGGCATGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTGGCGTCAGGCTTAGTGAATGCTgacga < 1:339791/143‑1 (MQ=255) | ATAACCATAACGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGA > NC_000913/3571104‑3571385 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |